Literature DB >> 21581805

catena-Poly[[[tetra-aqua-praseo-dym-ium(III)]-di-μ-nicotinato-κO:N;κO:N-disilver(I)-di-μ-nicotinato-κN:O;κN:O] perchlorate monohydrate].

Biao Guan, Chao-Hua Zhang, Wen-Dong Song.   

Abstract

In the title compound, {[Ag(2)Pr(C(6)H(4)NO(2))(4)(H(2)O)(4)]ClO(4)·H(2)O}(n), the n class="Chemical">Pr(III) atom, lying on a twofold rotation axis, has a distorted square-anti-prismatic coordination geometry, defined by four O atoms from four nicotinate (nic) ligands and four water mol-ecules. The Ag(I) atom is coordinated in an almost linear fashion by two pyridyl N atoms from two nicotinate ligands. The linear coordination is augmented by weak inter-actions with three O atoms from one perchlorate anion, one uncoordinated water mol-ecule and one carboxyl-ate group. Two Pr atoms link two {Ag(nic)(2)}(+) units into a ring, which is further extended into an infinite zigzag chain by sharing the Pr atoms. These chains are further connected into a three-dimensional network via weak Ag⋯O inter-actions, O-H⋯O hydrogen bonds, Ag⋯Ag inter-actions [3.357 (2) Å] and π-π inter-actions between the pyridyl rings [centroid-centroid distance = 3.685 (4) Å].

Entities:  

Year:  2009        PMID: 21581805      PMCID: PMC2968334          DOI: 10.1107/S1600536809001718

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Cheng et al. (2007a ▶,b ▶); Luo et al. (2006 ▶, 2007 ▶).

Experimental

Crystal data

[Ag2Pr(C6H4NO2)4(H2O)4]ClO4·H2O M = 1034.59 Orthorhombic, a = 35.396 (3) Å b = 12.3733 (10) Å c = 15.2324 (13) Å V = 6671.2 (10) Å3 Z = 8 Mo Kα radiation μ = 2.76 mm−1 T = 273 (2) K 0.30 × 0.25 × 0.22 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.453, T max = 0.552 16336 measured reflections 3065 independent reflections 2478 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.097 S = 1.06 3065 reflections 227 parameters 27 restraints H-atom parameters constrained Δρmax = 1.56 e Å−3 Δρmin = −0.87 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; n class="Chemical">program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809001718/hy2177sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809001718/hy2177Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ag2Pr(C6H4NO2)4(H2O)4]ClO4·H2OF(000) = 4032
Mr = 1034.59Dx = 2.060 Mg m3
Orthorhombic, CmcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2bc 2Cell parameters from 3121 reflections
a = 35.396 (3) Åθ = 1.4–28°
b = 12.3733 (10) ŵ = 2.76 mm1
c = 15.2324 (13) ÅT = 273 K
V = 6671.2 (10) Å3Plate, pale purple
Z = 80.30 × 0.25 × 0.22 mm
Bruker APEXII CCD diffractometer3065 independent reflections
Radiation source: fine-focus sealed tube2478 reflections with I > 2σ(I)
graphiteRint = 0.049
φ and ω scansθmax = 25.2°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −28→42
Tmin = 0.453, Tmax = 0.552k = −13→14
16336 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.097H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0479P)2 + 31.5675P] where P = (Fo2 + 2Fc2)/3
3065 reflections(Δ/σ)max < 0.001
227 parametersΔρmax = 1.56 e Å3
27 restraintsΔρmin = −0.86 e Å3
xyzUiso*/Ueq
Pr10.25001.08315 (12)0.25000.0216 (5)
Ag10.11088 (6)0.60988 (15)0.56463 (12)0.0439 (6)
C20.1570 (6)0.8876 (17)0.4208 (13)0.031 (5)
C60.1963 (6)0.9230 (16)0.3979 (13)0.027 (4)
C30.1260 (7)0.943 (2)0.3901 (17)0.048 (6)
H30.12921.00380.35550.058*
C10.1508 (6)0.7976 (18)0.4725 (13)0.033 (5)
H10.17160.76070.49450.040*
C40.0904 (8)0.908 (2)0.411 (2)0.067 (9)
H40.06920.94390.38990.081*
C50.0867 (7)0.816 (2)0.4631 (18)0.054 (7)
H50.06250.79270.47820.065*
N10.1163 (5)0.7608 (15)0.4925 (12)0.040 (5)
O10.2002 (4)0.9976 (12)0.3439 (9)0.035 (3)
O20.2235 (4)0.8725 (12)0.4344 (9)0.033 (3)
N20.1025 (5)0.4681 (15)0.6456 (12)0.037 (4)
C70.1323 (6)0.4144 (16)0.6770 (14)0.032 (5)
H70.15630.43850.66100.038*
C110.0685 (8)0.434 (2)0.669 (2)0.057 (8)
H110.04740.47180.64890.069*
Cl10.00000.6849 (10)0.5898 (10)0.080 (4)
O70.00000.803 (3)0.588 (4)0.150 (19)
O60.00000.647 (5)0.685 (4)0.25 (4)
C80.1300 (6)0.3255 (16)0.7316 (13)0.030 (5)
C90.0945 (7)0.292 (2)0.7558 (19)0.057 (8)
H90.09140.23440.79410.069*
C100.0631 (8)0.346 (3)0.723 (3)0.082 (12)
H100.03880.32320.73620.098*
C120.1652 (6)0.2676 (16)0.7619 (13)0.028 (4)
O30.1962 (4)0.3019 (12)0.7341 (9)0.032 (3)
O40.1611 (4)0.1878 (13)0.8104 (11)0.044 (4)
O1W0.2180 (4)0.9435 (12)0.1603 (9)0.035 (4)
H1W0.23730.91950.12950.053*
H2W0.19960.89180.18070.053*
O2W0.2515 (5)1.1653 (13)0.3996 (10)0.046 (4)
H3W0.26151.23940.41100.069*
H4W0.24541.14090.44860.069*
O3W0.1776 (8)0.50000.50000.080 (10)
H5W0.19200.50100.45830.120*
O50.0324 (9)0.643 (3)0.565 (3)0.19 (2)
U11U22U33U12U13U23
Pr10.0227 (9)0.0223 (8)0.0199 (8)0.0000.0012 (6)0.000
Ag10.0482 (12)0.0376 (11)0.0458 (11)−0.0044 (9)0.0028 (8)0.0151 (8)
C20.035 (12)0.033 (11)0.024 (10)0.001 (10)0.006 (9)0.001 (9)
C60.032 (12)0.025 (10)0.023 (10)0.000 (9)0.005 (9)−0.004 (8)
C30.038 (14)0.051 (15)0.054 (15)0.000 (12)0.009 (12)0.023 (12)
C10.034 (12)0.038 (12)0.028 (10)−0.003 (10)0.003 (9)0.004 (10)
C40.035 (15)0.07 (2)0.09 (2)0.003 (14)0.004 (15)0.043 (17)
C50.034 (14)0.060 (17)0.069 (18)−0.005 (13)0.012 (12)0.023 (14)
N10.039 (11)0.040 (11)0.040 (10)−0.002 (9)0.006 (8)0.014 (9)
O10.034 (8)0.032 (8)0.037 (8)0.000 (7)0.005 (6)0.013 (7)
O20.029 (8)0.038 (8)0.031 (8)0.000 (7)0.000 (6)0.005 (7)
N20.034 (11)0.033 (10)0.045 (11)0.000 (8)0.002 (8)0.010 (8)
C70.030 (12)0.028 (11)0.037 (12)−0.006 (9)0.001 (9)0.001 (9)
C110.037 (15)0.054 (17)0.08 (2)0.006 (12)0.003 (13)0.029 (15)
Cl10.040 (6)0.070 (8)0.130 (11)0.0000.0000.009 (7)
O70.17 (5)0.09 (3)0.19 (5)0.0000.0000.04 (3)
O60.45 (13)0.14 (5)0.15 (6)0.0000.0000.02 (4)
C80.030 (12)0.024 (11)0.036 (12)−0.002 (9)0.004 (9)0.001 (9)
C90.034 (14)0.054 (16)0.08 (2)−0.002 (12)0.005 (13)0.042 (15)
C100.029 (15)0.08 (2)0.13 (3)0.000 (15)0.004 (17)0.06 (2)
C120.026 (11)0.028 (11)0.031 (11)0.000 (9)0.003 (8)−0.005 (9)
O30.027 (8)0.031 (8)0.037 (8)−0.005 (6)0.002 (6)−0.005 (6)
O40.031 (9)0.044 (10)0.056 (10)0.005 (7)0.007 (7)0.023 (8)
O1W0.029 (8)0.035 (8)0.041 (9)−0.006 (6)0.006 (7)−0.009 (7)
O2W0.071 (12)0.044 (10)0.024 (8)−0.021 (9)0.013 (8)−0.010 (7)
O3W0.047 (16)0.15 (3)0.040 (14)0.0000.000−0.002 (17)
O50.07 (2)0.14 (3)0.35 (6)0.04 (2)0.07 (3)0.12 (3)
Pr1—O3i2.390 (14)N2—C111.32 (3)
Pr1—O1W2.477 (14)N2—C71.34 (3)
Pr1—O2W2.495 (14)C7—C81.38 (3)
Pr1—O12.504 (13)C7—H70.9300
Ag1—N22.165 (18)C11—C101.37 (4)
Ag1—N12.175 (18)C11—H110.9300
Ag1—O4ii2.777 (16)Cl1—O5iv1.31 (3)
Ag1—O52.81 (3)Cl1—O51.31 (3)
Ag1—O3W2.90 (2)Cl1—O71.46 (4)
Ag1—Ag1iii3.357 (2)Cl1—O61.52 (5)
C2—C31.37 (3)C8—C91.37 (3)
C2—C11.38 (3)C8—C121.51 (3)
C2—C61.50 (3)C9—C101.39 (4)
C6—O11.24 (2)C9—H90.9300
C6—O21.27 (3)C10—H100.9300
C3—C41.37 (4)C12—O41.24 (2)
C3—H30.9300C12—O31.25 (2)
C1—N11.34 (3)O1W—H1W0.88
C1—H10.9300O1W—H2W0.97
C4—C51.39 (4)O2W—H3W1.00
C4—H40.9300O2W—H4W0.83
C5—N11.33 (3)O3W—H5W0.82
C5—H50.9300
O3i—Pr1—O3v106.9 (7)C3—C4—H4120.8
O3i—Pr1—O1W146.7 (5)C5—C4—H4120.8
O3v—Pr1—O1W89.7 (5)N1—C5—C4123 (2)
O3i—Pr1—O1Wvi89.7 (5)N1—C5—H5118.7
O3v—Pr1—O1Wvi146.7 (5)C4—C5—H5118.7
O1W—Pr1—O1Wvi91.5 (7)C5—N1—C1118 (2)
O3i—Pr1—O2W69.4 (5)C5—N1—Ag1122.9 (16)
O3v—Pr1—O2W82.3 (5)C1—N1—Ag1119.1 (15)
O1W—Pr1—O2W142.9 (5)C6—O1—Pr1140.4 (13)
O1Wvi—Pr1—O2W76.7 (5)C11—N2—C7118 (2)
O3i—Pr1—O2Wvi82.3 (5)C11—N2—Ag1122.3 (16)
O3v—Pr1—O2Wvi69.4 (5)C7—N2—Ag1119.9 (14)
O1W—Pr1—O2Wvi76.7 (5)N2—C7—C8124 (2)
O1Wvi—Pr1—O2Wvi142.9 (5)N2—C7—H7117.8
O2W—Pr1—O2Wvi131.9 (7)C8—C7—H7117.8
O3i—Pr1—O1139.0 (5)N2—C11—C10123 (2)
O3v—Pr1—O175.5 (5)N2—C11—H11118.7
O1W—Pr1—O172.5 (5)C10—C11—H11118.7
O1Wvi—Pr1—O173.2 (5)O5iv—Cl1—O5122 (4)
O2W—Pr1—O170.5 (5)O5iv—Cl1—O7113.2 (18)
O2Wvi—Pr1—O1132.8 (5)O5—Cl1—O7113.2 (18)
O3i—Pr1—O1vi75.5 (5)O5iv—Cl1—O698 (2)
O3v—Pr1—O1vi139.0 (5)O5—Cl1—O698 (2)
O1W—Pr1—O1vi73.2 (5)O7—Cl1—O6109 (3)
O1Wvi—Pr1—O1vi72.5 (5)C9—C8—C7117 (2)
O2W—Pr1—O1vi132.8 (5)C9—C8—C12122.1 (19)
O2Wvi—Pr1—O1vi70.5 (5)C7—C8—C12120.9 (19)
O1—Pr1—O1vi129.9 (7)C8—C9—C10119 (2)
N2—Ag1—N1174.6 (7)C8—C9—H9120.3
N2—Ag1—Ag1iii71.2 (5)C10—C9—H9120.3
N1—Ag1—Ag1iii113.5 (5)C11—C10—C9119 (3)
C3—C2—C1118 (2)C11—C10—H10120.5
C3—C2—C6121.2 (19)C9—C10—H10120.5
C1—C2—C6121 (2)O4—C12—O3124.9 (19)
O1—C6—O2124.6 (19)O4—C12—C8117.7 (18)
O1—C6—C2118.3 (19)O3—C12—C8117.4 (18)
O2—C6—C2117.1 (17)C12—O3—Pr1i150.2 (13)
C4—C3—C2120 (2)Pr1—O1W—H1W100.1
C4—C3—H3119.9Pr1—O1W—H2W126.4
C2—C3—H3119.9H1W—O1W—H2W118.2
N1—C1—C2123 (2)Pr1—O2W—H3W122.7
N1—C1—H1118.3Pr1—O2W—H4W131.7
C2—C1—H1118.3H3W—O2W—H4W105.6
C3—C4—C5118 (3)
D—H···AD—HH···AD···AD—H···A
O1W—H1W···O2vi0.881.792.67 (2)179
O1W—H2W···O4iii0.971.682.63 (2)163
O2W—H3W···O2vii1.001.772.77 (2)176
O2W—H4W···O2viii0.831.952.76 (2)162
O3W—H5W···O1Wix0.822.152.91 (2)157
Table 1

Selected bond lengths (Å)

Pr1—O3i2.390 (14)
Pr1—O1W2.477 (14)
Pr1—O2W2.495 (14)
Pr1—O12.504 (13)
Ag1—N22.165 (18)
Ag1—N12.175 (18)
Ag1—O4ii2.777 (16)
Ag1—O52.81 (3)
Ag1—O3W2.90 (2)

Symmetry codes: (i) ; (ii) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1W⋯O2iii0.881.792.67 (2)179
O1W—H2W⋯O4iv0.971.682.63 (2)163
O2W—H3W⋯O2v1.001.772.77 (2)176
O2W—H4W⋯O2vi0.831.952.76 (2)162
O3W—H5W⋯O1Wvii0.822.152.91 (2)157

Symmetry codes: (iii) ; (iv) ; (v) ; (vi) ; (vii) .

  3 in total

1.  Diversity of crystal structure with different lanthanide ions involving in situ oxidation-hydrolysis reaction.

Authors:  Jian-Wen Cheng; Shou-Tian Zheng; Guo-Yu Yang
Journal:  Dalton Trans       Date:  2007-08-13       Impact factor: 4.390

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  A series of lanthanide-transition metal frameworks based on 1-, 2-, and 3D metal-organic motifs linked by different 1D copper(I) halide motifs.

Authors:  Jian-Wen Cheng; Shou-Tian Zheng; Guo-Yu Yang
Journal:  Inorg Chem       Date:  2007-11-01       Impact factor: 5.165

  3 in total

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