| Literature DB >> 21581781 |
Ariel Adamski1, Violetta Patroniak, Maciej Kubicki.
Abstract
In the title complex, (C(5)H(6)ClN(2))(C(7)H(8)NO)[CoCl(4)], the Co(II) ions are tetra-hedrally coordinated. The crystal structure is built from hydrogen-bonded centrosymmetric tetra-mers of tetra-chloridocobaltate(II) dianions and 3-amino-2-chloro-pyridinium cations, additionally strengthened by significant π-π stacking of pyridinium rings [interplanar distance 3.389 (3) Å]. The tetra-mers are linked by N-H⋯Cl hydrogen bonds into chains; the second kind of cations, viz. 2-acetyl-pyridinium, are connected by N-H⋯Cl hydrogen bonds to both sides of the chain. The Co-Cl bond lengths in the dianion correlate with the number of hydrogen bonds accepted by the Cl atom. An intramolecular C-H⋯Cl interaction is also present.Entities:
Year: 2009 PMID: 21581781 PMCID: PMC2968359 DOI: 10.1107/S1600536809000713
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| (C5H6ClN2)(C7H8NO)[CoCl4] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 7316 reflections | |
| θ = 3–25° | |
| µ = 1.73 mm−1 | |
| α = 89.114 (5)° | |
| β = 82.806 (5)° | Plate, blue |
| γ = 64.145 (6)° | 0.4 × 0.15 × 0.1 mm |
| Kuma KM-4-CCD four-circle diffractometer | 3798 independent reflections |
| Radiation source: fine-focus sealed tube | 3470 reflections with |
| graphite | |
| Detector resolution: 8.1929 pixels mm-1 | θmax = 27.0°, θmin = 2.7° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 10954 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3798 reflections | (Δ/σ)max < 0.001 |
| 216 parameters | Δρmax = 0.70 e Å−3 |
| 0 restraints | Δρmin = −0.36 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.88393 (5) | 0.59259 (4) | 0.24288 (2) | 0.01220 (9) | |
| Cl1 | 1.00305 (9) | 0.37850 (8) | 0.33709 (4) | 0.01584 (13) | |
| Cl2 | 0.70499 (9) | 0.51487 (8) | 0.15843 (4) | 0.01614 (13) | |
| Cl3 | 1.15608 (9) | 0.60998 (8) | 0.16588 (4) | 0.01751 (13) | |
| Cl4 | 0.66564 (10) | 0.86213 (8) | 0.30354 (4) | 0.01991 (14) | |
| N1A | 0.5900 (3) | 1.1877 (3) | −0.05439 (15) | 0.0177 (5) | |
| H1A | 0.542 (5) | 1.229 (4) | −0.098 (2) | 0.026 (9)* | |
| C2A | 0.7364 (4) | 1.0189 (3) | −0.06482 (16) | 0.0175 (5) | |
| Cl2A | 0.82058 (10) | 0.92797 (9) | −0.16337 (4) | 0.02218 (15) | |
| C3A | 0.8134 (4) | 0.9213 (3) | 0.00390 (16) | 0.0161 (5) | |
| N31A | 0.9566 (4) | 0.7490 (3) | −0.00534 (16) | 0.0236 (5) | |
| H31A | 1.011 (5) | 0.705 (4) | −0.058 (2) | 0.033 (9)* | |
| H31B | 1.015 (5) | 0.690 (4) | 0.042 (2) | 0.032 (9)* | |
| C4A | 0.7311 (4) | 1.0089 (4) | 0.08237 (17) | 0.0186 (5) | |
| H4A | 0.7798 | 0.9479 | 0.1307 | 0.022* | |
| C5A | 0.5794 (4) | 1.1834 (4) | 0.08995 (17) | 0.0209 (6) | |
| H5A | 0.5254 | 1.2408 | 0.1434 | 0.025* | |
| C6A | 0.5065 (4) | 1.2742 (4) | 0.02109 (18) | 0.0198 (6) | |
| H6A | 0.4014 | 1.3933 | 0.0259 | 0.024* | |
| N1B | 0.7520 (3) | 0.5002 (3) | 0.51335 (13) | 0.0148 (4) | |
| H1B | 0.844 (5) | 0.447 (4) | 0.470 (2) | 0.032 (9)* | |
| C2B | 0.7401 (4) | 0.4099 (3) | 0.58207 (15) | 0.0148 (5) | |
| C21B | 0.9013 (4) | 0.2182 (3) | 0.57886 (16) | 0.0162 (5) | |
| O21B | 1.0417 (3) | 0.1707 (3) | 0.52259 (12) | 0.0222 (4) | |
| C22B | 0.8761 (4) | 0.1020 (4) | 0.64563 (17) | 0.0210 (6) | |
| H22A | 0.9764 | −0.0222 | 0.6320 | 0.029* | |
| H22B | 0.7376 | 0.1102 | 0.6503 | 0.029* | |
| H22C | 0.8978 | 0.1416 | 0.6985 | 0.029* | |
| C3B | 0.5901 (4) | 0.4969 (4) | 0.64742 (16) | 0.0176 (5) | |
| H3B | 0.5773 | 0.4356 | 0.6959 | 0.021* | |
| C4B | 0.4563 (4) | 0.6782 (4) | 0.64097 (17) | 0.0201 (6) | |
| H4B | 0.3530 | 0.7407 | 0.6857 | 0.024* | |
| C5B | 0.4745 (4) | 0.7655 (4) | 0.56984 (17) | 0.0198 (6) | |
| H5B | 0.3839 | 0.8878 | 0.5653 | 0.024* | |
| C6B | 0.6263 (4) | 0.6729 (3) | 0.50503 (17) | 0.0179 (5) | |
| H6B | 0.6410 | 0.7308 | 0.4556 | 0.022* |
| Co1 | 0.01261 (16) | 0.01326 (16) | 0.01084 (17) | −0.00584 (13) | −0.00127 (12) | 0.00103 (13) |
| Cl1 | 0.0180 (3) | 0.0160 (3) | 0.0126 (3) | −0.0066 (2) | −0.0024 (2) | 0.0034 (2) |
| Cl2 | 0.0149 (3) | 0.0185 (3) | 0.0152 (3) | −0.0069 (2) | −0.0039 (2) | −0.0007 (2) |
| Cl3 | 0.0151 (3) | 0.0224 (3) | 0.0162 (3) | −0.0097 (2) | −0.0007 (2) | 0.0032 (2) |
| Cl4 | 0.0213 (3) | 0.0151 (3) | 0.0190 (3) | −0.0047 (2) | 0.0003 (2) | −0.0023 (2) |
| N1A | 0.0163 (11) | 0.0158 (11) | 0.0217 (12) | −0.0073 (9) | −0.0041 (9) | 0.0036 (9) |
| C2A | 0.0176 (12) | 0.0193 (13) | 0.0167 (13) | −0.0099 (10) | 0.0010 (10) | 0.0011 (10) |
| Cl2A | 0.0260 (3) | 0.0232 (3) | 0.0140 (3) | −0.0083 (3) | −0.0004 (2) | 0.0017 (2) |
| C3A | 0.0156 (12) | 0.0185 (13) | 0.0174 (13) | −0.0105 (10) | −0.0020 (10) | 0.0037 (10) |
| N31A | 0.0246 (12) | 0.0212 (12) | 0.0157 (12) | −0.0018 (10) | −0.0010 (10) | 0.0022 (10) |
| C4A | 0.0201 (13) | 0.0201 (13) | 0.0172 (13) | −0.0106 (11) | −0.0019 (10) | 0.0023 (11) |
| C5A | 0.0221 (13) | 0.0223 (14) | 0.0211 (14) | −0.0132 (11) | 0.0012 (11) | −0.0038 (11) |
| C6A | 0.0190 (13) | 0.0161 (13) | 0.0300 (15) | −0.0122 (11) | −0.0072 (11) | 0.0051 (11) |
| N1B | 0.0162 (10) | 0.0166 (11) | 0.0122 (10) | −0.0077 (9) | −0.0016 (8) | −0.0002 (9) |
| C2B | 0.0160 (12) | 0.0197 (13) | 0.0131 (12) | −0.0114 (10) | −0.0038 (10) | 0.0004 (10) |
| C21B | 0.0184 (12) | 0.0193 (13) | 0.0140 (13) | −0.0102 (10) | −0.0051 (10) | 0.0014 (10) |
| O21B | 0.0212 (10) | 0.0225 (10) | 0.0173 (10) | −0.0051 (8) | −0.0007 (8) | 0.0025 (8) |
| C22B | 0.0244 (14) | 0.0222 (14) | 0.0183 (13) | −0.0117 (11) | −0.0048 (11) | 0.0063 (11) |
| C3B | 0.0177 (12) | 0.0256 (14) | 0.0138 (12) | −0.0133 (11) | −0.0021 (10) | 0.0009 (11) |
| C4B | 0.0167 (12) | 0.0237 (14) | 0.0195 (14) | −0.0088 (11) | 0.0001 (10) | −0.0066 (11) |
| C5B | 0.0196 (13) | 0.0175 (13) | 0.0231 (14) | −0.0083 (11) | −0.0046 (11) | −0.0021 (11) |
| C6B | 0.0221 (13) | 0.0176 (13) | 0.0175 (13) | −0.0112 (11) | −0.0056 (10) | 0.0039 (10) |
| Co1—Cl4 | 2.2593 (7) | N1B—C6B | 1.342 (3) |
| Co1—Cl1 | 2.2751 (7) | N1B—C2B | 1.352 (3) |
| Co1—Cl3 | 2.2771 (7) | N1B—H1B | 0.88 (3) |
| Co1—Cl2 | 2.2893 (7) | C2B—C3B | 1.378 (4) |
| N1A—C2A | 1.341 (3) | C2B—C21B | 1.512 (4) |
| N1A—C6A | 1.362 (4) | C21B—O21B | 1.214 (3) |
| N1A—H1A | 0.84 (3) | C21B—C22B | 1.490 (4) |
| C2A—C3A | 1.399 (4) | C22B—H22A | 0.9800 |
| C2A—Cl2A | 1.705 (3) | C22B—H22B | 0.9800 |
| C3A—N31A | 1.354 (3) | C22B—H22C | 0.9800 |
| C3A—C4A | 1.406 (4) | C3B—C4B | 1.406 (4) |
| N31A—H31A | 0.90 (4) | C3B—H3B | 0.9500 |
| N31A—H31B | 0.96 (4) | C4B—C5B | 1.379 (4) |
| C4A—C5A | 1.386 (4) | C4B—H4B | 0.9500 |
| C4A—H4A | 0.9500 | C5B—C6B | 1.388 (4) |
| C5A—C6A | 1.372 (4) | C5B—H5B | 0.9500 |
| C5A—H5A | 0.9500 | C6B—H6B | 0.9500 |
| C6A—H6A | 0.9500 | ||
| Cl4—Co1—Cl1 | 112.35 (3) | C6B—N1B—C2B | 123.6 (2) |
| Cl4—Co1—Cl3 | 110.42 (3) | C6B—N1B—H1B | 116 (2) |
| Cl1—Co1—Cl3 | 108.54 (3) | C2B—N1B—H1B | 121 (2) |
| Cl4—Co1—Cl2 | 106.68 (3) | N1B—C2B—C3B | 119.1 (2) |
| Cl1—Co1—Cl2 | 109.10 (3) | N1B—C2B—C21B | 114.6 (2) |
| Cl3—Co1—Cl2 | 109.72 (3) | C3B—C2B—C21B | 126.3 (2) |
| C2A—N1A—C6A | 123.7 (2) | O21B—C21B—C22B | 124.9 (2) |
| C2A—N1A—H1A | 113 (2) | O21B—C21B—C2B | 117.8 (2) |
| C6A—N1A—H1A | 123 (2) | C22B—C21B—C2B | 117.3 (2) |
| N1A—C2A—C3A | 120.3 (2) | C21B—C22B—H22A | 109.5 |
| N1A—C2A—Cl2A | 118.0 (2) | C21B—C22B—H22B | 109.5 |
| C3A—C2A—Cl2A | 121.7 (2) | H22A—C22B—H22B | 109.5 |
| N31A—C3A—C2A | 121.0 (2) | C21B—C22B—H22C | 109.5 |
| N31A—C3A—C4A | 122.0 (2) | H22A—C22B—H22C | 109.5 |
| C2A—C3A—C4A | 116.9 (2) | H22B—C22B—H22C | 109.5 |
| C3A—N31A—H31A | 117 (2) | C2B—C3B—C4B | 118.8 (2) |
| C3A—N31A—H31B | 119 (2) | C2B—C3B—H3B | 120.6 |
| H31A—N31A—H31B | 123 (3) | C4B—C3B—H3B | 120.6 |
| C5A—C4A—C3A | 120.7 (2) | C5B—C4B—C3B | 120.2 (2) |
| C5A—C4A—H4A | 119.7 | C5B—C4B—H4B | 119.9 |
| C3A—C4A—H4A | 119.7 | C3B—C4B—H4B | 119.9 |
| C6A—C5A—C4A | 120.7 (3) | C4B—C5B—C6B | 119.4 (2) |
| C6A—C5A—H5A | 119.6 | C4B—C5B—H5B | 120.3 |
| C4A—C5A—H5A | 119.6 | C6B—C5B—H5B | 120.3 |
| N1A—C6A—C5A | 117.7 (2) | N1B—C6B—C5B | 118.9 (2) |
| N1A—C6A—H6A | 121.2 | N1B—C6B—H6B | 120.5 |
| C5A—C6A—H6A | 121.2 | C5B—C6B—H6B | 120.5 |
| C6A—N1A—C2A—C3A | −0.5 (4) | C6B—N1B—C2B—C21B | −178.2 (2) |
| C6A—N1A—C2A—Cl2A | 178.5 (2) | N1B—C2B—C21B—O21B | 10.7 (3) |
| N1A—C2A—C3A—N31A | 177.9 (2) | C3B—C2B—C21B—O21B | −168.3 (2) |
| Cl2A—C2A—C3A—N31A | −1.0 (4) | N1B—C2B—C21B—C22B | −169.7 (2) |
| N1A—C2A—C3A—C4A | −0.3 (4) | C3B—C2B—C21B—C22B | 11.3 (4) |
| Cl2A—C2A—C3A—C4A | −179.19 (19) | N1B—C2B—C3B—C4B | −1.1 (4) |
| N31A—C3A—C4A—C5A | −177.7 (3) | C21B—C2B—C3B—C4B | 177.9 (2) |
| C2A—C3A—C4A—C5A | 0.5 (4) | C2B—C3B—C4B—C5B | 0.8 (4) |
| C3A—C4A—C5A—C6A | 0.0 (4) | C3B—C4B—C5B—C6B | −0.2 (4) |
| C2A—N1A—C6A—C5A | 1.0 (4) | C2B—N1B—C6B—C5B | −0.3 (4) |
| C4A—C5A—C6A—N1A | −0.8 (4) | C4B—C5B—C6B—N1B | −0.1 (4) |
| C6B—N1B—C2B—C3B | 0.9 (4) |
| H··· | ||||
| N1B—H1B···Cl1 | 0.88 (3) | 2.28 (4) | 3.126 (2) | 161 (3) |
| N1A—H1A···Cl2i | 0.84 (3) | 2.41 (3) | 3.127 (2) | 145 (3) |
| N31A—H31A···Cl2ii | 0.90 (4) | 2.51 (4) | 3.323 (3) | 151 (3) |
| N31A—H31B···Cl3 | 0.96 (4) | 2.33 (4) | 3.267 (3) | 167 (3) |
| C6B—H6B···Cl4 | 0.95 | 2.71 | 3.647 (3) | 171 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1 | 0.88 (3) | 2.28 (4) | 3.126 (2) | 161 (3) |
| N1 | 0.84 (3) | 2.41 (3) | 3.127 (2) | 145 (3) |
| N31 | 0.90 (4) | 2.51 (4) | 3.323 (3) | 151 (3) |
| N31 | 0.96 (4) | 2.33 (4) | 3.267 (3) | 167 (3) |
| C6 | 0.95 | 2.71 | 3.647 (3) | 171 |
Symmetry codes: (i) ; (ii) .