Literature DB >> 21581759

Di-μ-chlorido-bis-[chlorido(1,4,6-trimethyl-6-nitro-1,4-diazepine)copper(II)].

Adailton J Bortoluzzi1, Ademir Neves, Rosely A Peralta, Tiago P Camargo, Vitor C Weiss.   

Abstract

The title neutral copper complex, [Cu(2)Cl(4)(C(8)H(17)N(3)O(2))(2)], shows a binuclear center with a Cu-(μ-Cl)(2)-Cu core, in which each copper ion is coordinated by the N,N,O donor atoms of the tridentate ligand 1,4,6-trimethyl-6-nitro-1,4-diazepine (meaaz-NO(2)) and three chloride exogenous ligands. Each metal ion is facially coordinated by meaaz-NO(2) through N,N,O donor atoms, whereas two bridging and one terminal chloride ions occupy the other face of the highly Jahn-Teller-distorted octa-hedron. Two N atoms from tertiary amine groups of the meaaz-NO(2) ligand and two exogenous Cl atoms with short Cu-N and Cu-Cl distances define the equatorial plane. The coordination around each Cu(II) ion is completed by another Cl atom and an O atom from the NO(2) group, in the axial positions. The binuclear complex exhibits a centrosymmetric structure with point symmetry .

Entities:  

Year:  2009        PMID: 21581759      PMCID: PMC2968152          DOI: 10.1107/S1600536808043390

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Belousoff et al. (2006 ▶); Deal & Burstyn (1996 ▶); Fry et al. (2005 ▶); Hegg & Burstyn (1998 ▶); Peralta et al. (2005 ▶); Rodriguez, et al. (1999 ▶); Romba et al. (2006 ▶). For the synthesis of the meaaz-NO2 ligand see Ge et al. (2006 ▶). For related structures, see: Astner et al. (2008 ▶); Schwindinger et al. (1980 ▶); Steed et al. (2007 ▶).

Experimental

Crystal data

[Cu2Cl4(C8H17N3O2)2] M = 643.37 Monoclinic, a = 10.5478 (2) Å b = 10.9251 (2) Å c = 11.4430 (2) Å β = 102.297 (1)° V = 1288.39 (4) Å3 Z = 2 Mo Kα radiation μ = 2.10 mm−1 T = 296 (2) K 0.31 × 0.14 × 0.09 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2006 ▶) T min = 0.562, T max = 0.833 25284 measured reflections 2528 independent reflections 2080 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.083 S = 1.07 2528 reflections 148 parameters H-atom parameters constrained Δρmax = 0.76 e Å−3 Δρmin = −0.37 e Å−3 Data collection: APEX2, BIS and COSMO (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808043390/pk2138sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808043390/pk2138Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu2Cl4(C8H17N3O2)2]F(000) = 660
Mr = 643.37Dx = 1.658 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 6584 reflections
a = 10.5478 (2) Åθ = 2.6–29.9°
b = 10.9251 (2) ŵ = 2.10 mm1
c = 11.4430 (2) ÅT = 296 K
β = 102.297 (1)°Block, dark green
V = 1288.39 (4) Å30.31 × 0.14 × 0.09 mm
Z = 2
Bruker APEXII CCD area-detector diffractometer2528 independent reflections
Radiation source: fine-focus sealed tube2080 reflections with I > 2σ(I)
graphiteRint = 0.036
φ and ω scansθmax = 26.0°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Bruker, 2006)h = −13→12
Tmin = 0.562, Tmax = 0.833k = −13→13
25284 measured reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.083H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0432P)2 + 0.7796P] where P = (Fo2 + 2Fc2)/3
2528 reflections(Δ/σ)max = 0.001
148 parametersΔρmax = 0.76 e Å3
0 restraintsΔρmin = −0.37 e Å3
Experimental. Absorption correction: SADABS (Bruker, 2006) was used to scale the data and to perform the multi-scan semi-empirical absorption correction.
xyzUiso*/Ueq
Cu10.41672 (3)0.13540 (3)1.03616 (3)0.03146 (12)
Cl10.45369 (7)0.11762 (7)1.23819 (6)0.0467 (2)
Cl20.62792 (6)0.10672 (6)1.02889 (7)0.04311 (19)
N10.4017 (2)0.4025 (2)1.0951 (2)0.0379 (5)
C10.2738 (2)0.3853 (2)0.9997 (2)0.0328 (6)
C20.3105 (2)0.3551 (2)0.8818 (2)0.0323 (5)
H2A0.23440.36650.81820.039*
H2B0.37520.41380.86890.039*
N30.3623 (2)0.22930 (18)0.87072 (18)0.0305 (5)
C40.2543 (3)0.1488 (2)0.8105 (2)0.0385 (6)
H4A0.28870.07050.79190.046*
H4B0.20990.18620.73610.046*
C50.1594 (3)0.1294 (2)0.8915 (2)0.0384 (6)
H5A0.08390.18090.86470.046*
H5B0.13070.04480.88600.046*
N60.2196 (2)0.15908 (19)1.01947 (18)0.0318 (5)
C70.1930 (3)0.2888 (3)1.0467 (2)0.0392 (6)
H7A0.20710.29781.13290.047*
H7B0.10210.30561.01390.047*
C80.2051 (3)0.5099 (3)0.9930 (3)0.0437 (7)
H8A0.26070.57210.97230.065*
H8B0.18570.52861.06930.065*
H8C0.12600.50680.93330.065*
O20.5045 (2)0.38177 (18)1.0687 (2)0.0487 (5)
O10.3919 (3)0.4391 (3)1.1928 (2)0.0739 (8)
C110.4596 (3)0.2357 (3)0.7947 (3)0.0458 (7)
H11A0.49050.15480.78340.069*
H11B0.53100.28600.83300.069*
H11C0.42040.27030.71850.069*
C120.1585 (3)0.0810 (3)1.0982 (3)0.0480 (7)
H12A0.19480.10031.18030.072*
H12B0.1745−0.00361.08370.072*
H12C0.06670.09571.08150.072*
U11U22U33U12U13U23
Cu10.02805 (18)0.03469 (19)0.02830 (19)0.00043 (12)−0.00153 (12)0.00140 (13)
Cl10.0457 (4)0.0598 (5)0.0286 (3)−0.0011 (3)−0.0057 (3)0.0030 (3)
Cl20.0305 (3)0.0414 (4)0.0548 (4)0.0014 (3)0.0034 (3)−0.0005 (3)
N10.0431 (14)0.0303 (12)0.0341 (13)0.0022 (10)−0.0052 (10)−0.0050 (10)
C10.0286 (13)0.0343 (14)0.0307 (13)0.0012 (10)−0.0043 (10)−0.0038 (10)
C20.0350 (13)0.0290 (13)0.0291 (13)−0.0018 (10)−0.0014 (10)0.0010 (10)
N30.0340 (11)0.0295 (11)0.0264 (10)−0.0021 (8)0.0026 (8)−0.0009 (9)
C40.0474 (16)0.0340 (15)0.0280 (13)−0.0064 (11)−0.0059 (11)−0.0032 (11)
C50.0362 (14)0.0385 (15)0.0339 (14)−0.0074 (11)−0.0071 (11)−0.0005 (11)
N60.0291 (11)0.0348 (12)0.0290 (11)−0.0026 (9)0.0004 (9)0.0036 (9)
C70.0367 (14)0.0420 (16)0.0389 (15)0.0005 (11)0.0080 (12)−0.0009 (12)
C80.0431 (16)0.0391 (15)0.0450 (16)0.0096 (12)0.0008 (13)−0.0041 (13)
O20.0340 (11)0.0482 (12)0.0561 (13)−0.0006 (8)−0.0078 (9)−0.0021 (10)
O10.0730 (17)0.095 (2)0.0429 (13)0.0211 (14)−0.0124 (11)−0.0325 (13)
C110.0544 (18)0.0485 (17)0.0381 (15)0.0034 (14)0.0176 (13)0.0033 (13)
C120.0418 (16)0.0530 (18)0.0499 (18)−0.0078 (13)0.0114 (13)0.0137 (15)
Cu1—N62.064 (2)C4—H4A0.9700
Cu1—N32.122 (2)C4—H4B0.9700
Cu1—Cl22.2686 (7)C5—N61.502 (3)
Cu1—Cl12.2694 (7)C5—H5A0.9700
Cu1—Cl2i2.7611 (8)C5—H5B0.9700
Cu1—O22.845 (2)N6—C121.484 (3)
Cl2—Cu1i2.7611 (8)N6—C71.491 (3)
N1—O21.207 (3)C7—H7A0.9700
N1—O11.212 (3)C7—H7B0.9700
N1—C11.556 (3)C8—H8A0.9600
C1—C21.517 (4)C8—H8B0.9600
C1—C71.524 (4)C8—H8C0.9600
C1—C81.536 (4)C11—H11A0.9600
C2—N31.495 (3)C11—H11B0.9600
C2—H2A0.9700C11—H11C0.9600
C2—H2B0.9700C12—H12A0.9600
N3—C111.482 (3)C12—H12B0.9600
N3—C41.487 (3)C12—H12C0.9600
C4—C51.517 (4)
N6—Cu1—N377.35 (8)N3—C4—H4B109.7
N6—Cu1—Cl2172.72 (6)C5—C4—H4B109.7
N3—Cu1—Cl296.62 (6)H4A—C4—H4B108.2
N6—Cu1—Cl193.22 (6)N6—C5—C4111.6 (2)
N3—Cu1—Cl1154.87 (6)N6—C5—H5A109.3
Cl2—Cu1—Cl193.93 (3)C4—C5—H5A109.3
N6—Cu1—Cl2i89.11 (6)N6—C5—H5B109.3
N3—Cu1—Cl2i102.97 (6)C4—C5—H5B109.3
Cl2—Cu1—Cl2i88.29 (2)H5A—C5—H5B108.0
Cl1—Cu1—Cl2i100.08 (3)C12—N6—C7107.1 (2)
N6—Cu1—O2100.77 (7)C12—N6—C5108.6 (2)
N3—Cu1—O271.22 (7)C7—N6—C5110.5 (2)
Cl2—Cu1—O280.84 (5)C12—N6—Cu1115.53 (16)
Cl1—Cu1—O288.12 (5)C7—N6—Cu1109.30 (15)
Cl2i—Cu1—O2166.84 (5)C5—N6—Cu1105.75 (16)
Cu1—Cl2—Cu1i91.71 (2)N6—C7—C1116.1 (2)
O2—N1—O1123.4 (2)N6—C7—H7A108.3
O2—N1—C1119.5 (2)C1—C7—H7A108.3
O1—N1—C1117.1 (2)N6—C7—H7B108.3
C2—C1—C7115.6 (2)C1—C7—H7B108.3
C2—C1—C8110.8 (2)H7A—C7—H7B107.4
C7—C1—C8109.7 (2)C1—C8—H8A109.5
C2—C1—N1107.6 (2)C1—C8—H8B109.5
C7—C1—N1107.6 (2)H8A—C8—H8B109.5
C8—C1—N1104.9 (2)C1—C8—H8C109.5
N3—C2—C1116.3 (2)H8A—C8—H8C109.5
N3—C2—H2A108.2H8B—C8—H8C109.5
C1—C2—H2A108.2N1—O2—Cu185.76 (15)
N3—C2—H2B108.2N3—C11—H11A109.5
C1—C2—H2B108.2N3—C11—H11B109.5
H2A—C2—H2B107.4H11A—C11—H11B109.5
C11—N3—C4108.3 (2)N3—C11—H11C109.5
C11—N3—C2108.6 (2)H11A—C11—H11C109.5
C4—N3—C2109.0 (2)H11B—C11—H11C109.5
C11—N3—Cu1117.18 (17)N6—C12—H12A109.5
C4—N3—Cu199.36 (15)N6—C12—H12B109.5
C2—N3—Cu1113.78 (15)H12A—C12—H12B109.5
N3—C4—C5109.8 (2)N6—C12—H12C109.5
N3—C4—H4A109.7H12A—C12—H12C109.5
C5—C4—H4A109.7H12B—C12—H12C109.5
  6 in total

1.  Synthesis, X-ray crystal structures, magnetism, and phosphate ester cleavage properties of copper(II) complexes of N-substituted derivatives of 1,4,7-triazacyclononane.

Authors:  Matthew J Belousoff; Martin B Duriska; Bim Graham; Stuart R Batten; Boujemaa Moubaraki; Keith S Murray; Leone Spiccia
Journal:  Inorg Chem       Date:  2006-05-01       Impact factor: 5.165

2.  The 6-amino-6-methyl-1,4-diazepine group as an ancillary ligand framework for neutral and cationic scandium and yttrium alkyls.

Authors:  Shaozhong Ge; Sérgio Bambirra; Auke Meetsma; Bart Hessen
Journal:  Chem Commun (Camb)       Date:  2006-06-27       Impact factor: 6.222

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  First-transition-metal complexes containing the ligands 6-amino-6-methylperhydro-1,4-diazepine (AAZ) and a new functionalized derivative: can AAZ act as a mimetic ligand for 1,4,7-triazacyclononane?

Authors:  Rosely A Peralta; Ademir Neves; Adailton J Bortoluzzi; Annelise Casellato; Ademir Dos Anjos; Alessandra Greatti; Fernando R Xavier; Bruno Szpoganicz
Journal:  Inorg Chem       Date:  2005-10-31       Impact factor: 5.165

5.  Templated crystal nucleation: mixed crystals of very different copper(II) N,N',N''-trimethyltriazacyclononane complexes.

Authors:  Jonathan W Steed; Andrés E Goeta; Janusz Lipkowski; Dariusz Swierczynski; Vicky Panteleon; Sheetal Handa
Journal:  Chem Commun (Camb)       Date:  2006-11-24       Impact factor: 6.222

6.  Kinetics and mechanism of hydrolysis of a model phosphate diester by [Cu(Me3tacn)(OH2)2]2+ (Me3tacn = 1,4,7-trimethyl-1,4,7-triazacyclononane).

Authors:  Fiona H Fry; Adam J Fischmann; Matthew J Belousoff; Leone Spiccia; Joel Brügger
Journal:  Inorg Chem       Date:  2005-02-21       Impact factor: 5.165

  6 in total

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