Literature DB >> 21581632

1-(1,3-Benzodioxol-5-yl)pentan-1-one.

Xiao-Ming Wang1, Wei Cheng, Yu-Wang Han.   

Abstract

In the mol-ecule of title compound, C(12)H(14)O(3), the benzodioxole ring system is essentially planar. In the crystal structure, weak inter-molecular C-H⋯O hydrogen bonds link mol-ecules into chains along the c axis, and π-π contacts between dioxole rings and between dioxole and benzene rings of the benzodioxole ring systems [centroid-centroid distances 3.702 (3) and 3.903 (3) Å] may further stabilize the structure. Two C-H⋯π inter-actions are also found.

Entities:  

Year:  2008        PMID: 21581632      PMCID: PMC2968086          DOI: 10.1107/S1600536808040257

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Koeppe et al. (1969 ▶). For a related structure, see: May et al. (2000 ▶). For bond-length data, see: Allen et al. (1987 ▶);

Experimental

Crystal data

C12H14O3 M = 206.23 Monoclinic, a = 6.7940 (14) Å b = 12.960 (3) Å c = 12.244 (2) Å β = 93.46 (3)° V = 1076.1 (4) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 298 (2) K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.973, T max = 0.991 2133 measured reflections 1961 independent reflections 1079 reflections with I > 2σ(I) R int = 0.031 3 standard reflections frequency: 120 min intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.068 wR(F 2) = 0.171 S = 1.00 1961 reflections 136 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.20 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1985 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶) and PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808040257/hk2587sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808040257/hk2587Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H14O3F(000) = 440
Mr = 206.23Dx = 1.273 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 25 reflections
a = 6.7940 (14) Åθ = 9–12°
b = 12.960 (3) ŵ = 0.09 mm1
c = 12.244 (2) ÅT = 298 K
β = 93.46 (3)°Needle, colorless
V = 1076.1 (4) Å30.30 × 0.20 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer1079 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.031
graphiteθmax = 25.3°, θmin = 2.3°
ω/2θ scansh = 0→8
Absorption correction: ψ scan (North et al., 1968)k = 0→15
Tmin = 0.973, Tmax = 0.991l = −14→14
2133 measured reflections3 standard reflections every 120 min
1961 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.068Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.171H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.06P)2 + 0.6P] where P = (Fo2 + 2Fc2)/3
1961 reflections(Δ/σ)max < 0.001
136 parametersΔρmax = 0.19 e Å3
0 restraintsΔρmin = −0.20 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.0098 (4)0.8069 (2)1.06817 (19)0.0789 (9)
O20.7749 (3)0.5827 (2)0.94774 (18)0.0650 (7)
O30.6590 (4)0.6096 (2)1.11889 (18)0.0666 (8)
C1−0.4973 (6)1.0228 (4)0.8325 (3)0.0911 (14)
H1A−0.56081.04660.76500.137*
H1B−0.44671.08090.87410.137*
H1C−0.59090.98640.87380.137*
C2−0.3317 (5)0.9524 (3)0.8088 (3)0.0678 (11)
H2A−0.24160.98940.76440.081*
H2B−0.38490.89510.76550.081*
C3−0.2171 (5)0.9099 (3)0.9067 (3)0.0589 (9)
H3A−0.30540.86990.94950.071*
H3B−0.16800.96700.95190.071*
C4−0.0454 (5)0.8428 (3)0.8797 (3)0.0567 (9)
H4A−0.09470.78660.83330.068*
H4B0.04350.88330.83790.068*
C50.0698 (5)0.7978 (3)0.9768 (3)0.0519 (9)
C60.2532 (5)0.7393 (2)0.9607 (2)0.0458 (8)
C70.3230 (5)0.7220 (3)0.8582 (2)0.0507 (9)
H7A0.25190.74720.79660.061*
C80.4974 (5)0.6678 (3)0.8456 (3)0.0566 (9)
H8A0.54210.65460.77660.068*
C90.5996 (5)0.6350 (3)0.9378 (3)0.0501 (8)
C100.5302 (5)0.6509 (3)1.0409 (2)0.0503 (8)
C110.3604 (5)0.7021 (3)1.0545 (2)0.0514 (9)
H11A0.31550.71251.12390.062*
C120.8125 (5)0.5645 (3)1.0614 (3)0.0627 (10)
H12A0.81830.49081.07540.075*
H12B0.93820.59451.08600.075*
U11U22U33U12U13U23
O10.0840 (19)0.098 (2)0.0557 (15)0.0266 (17)0.0117 (13)0.0023 (14)
O20.0596 (16)0.0744 (18)0.0610 (15)0.0185 (14)0.0035 (12)−0.0015 (13)
O30.0670 (17)0.0770 (18)0.0552 (14)0.0171 (14)−0.0010 (12)0.0033 (13)
C10.101 (3)0.085 (3)0.085 (3)0.032 (3)−0.015 (3)−0.012 (2)
C20.074 (3)0.064 (2)0.065 (2)0.014 (2)0.0040 (19)0.0096 (19)
C30.063 (2)0.046 (2)0.067 (2)−0.0010 (18)0.0010 (18)−0.0020 (18)
C40.055 (2)0.058 (2)0.0580 (19)−0.0002 (18)0.0049 (16)0.0037 (18)
C50.059 (2)0.048 (2)0.0497 (18)−0.0008 (17)0.0083 (16)−0.0009 (16)
C60.049 (2)0.0390 (18)0.0498 (17)−0.0036 (16)0.0070 (15)0.0020 (14)
C70.055 (2)0.050 (2)0.0460 (17)−0.0029 (18)−0.0016 (15)0.0032 (15)
C80.063 (2)0.060 (2)0.0479 (18)−0.0032 (19)0.0119 (17)−0.0051 (16)
C90.054 (2)0.044 (2)0.0521 (18)−0.0044 (17)0.0040 (16)−0.0030 (15)
C100.059 (2)0.044 (2)0.0469 (17)−0.0014 (17)−0.0016 (16)0.0008 (15)
C110.057 (2)0.053 (2)0.0443 (17)0.0006 (18)0.0054 (16)−0.0015 (15)
C120.062 (2)0.061 (2)0.064 (2)0.006 (2)0.0000 (18)0.0036 (19)
O1—C51.220 (4)C4—C51.501 (4)
O2—C91.370 (4)C4—H4A0.9700
O2—C121.419 (4)C4—H4B0.9700
O3—C101.365 (4)C5—C61.482 (4)
O3—C121.419 (4)C6—C71.387 (4)
C1—C21.491 (5)C6—C111.407 (4)
C1—H1A0.9600C7—C81.394 (5)
C1—H1B0.9600C7—H7A0.9300
C1—H1C0.9600C8—C91.358 (5)
C2—C31.495 (4)C8—H8A0.9300
C2—H2A0.9700C9—C101.389 (4)
C2—H2B0.9700C10—C111.349 (4)
C3—C41.508 (4)C11—H11A0.9300
C3—H3A0.9700C12—H12A0.9700
C3—H3B0.9700C12—H12B0.9700
C9—O2—C12105.9 (3)O1—C5—C4120.1 (3)
C10—O3—C12105.9 (2)C6—C5—C4119.8 (3)
C2—C1—H1A109.5C7—C6—C11119.6 (3)
C2—C1—H1B109.5C7—C6—C5122.6 (3)
H1A—C1—H1B109.5C11—C6—C5117.8 (3)
C2—C1—H1C109.5C6—C7—C8121.4 (3)
H1A—C1—H1C109.5C6—C7—H7A119.3
H1B—C1—H1C109.5C8—C7—H7A119.3
C1—C2—C3115.6 (3)C9—C8—C7117.4 (3)
C1—C2—H2A108.4C9—C8—H8A121.3
C3—C2—H2A108.4C7—C8—H8A121.3
C1—C2—H2B108.4C8—C9—O2128.8 (3)
C3—C2—H2B108.4C8—C9—C10121.7 (3)
H2A—C2—H2B107.5O2—C9—C10109.5 (3)
C2—C3—C4114.1 (3)C11—C10—O3128.6 (3)
C2—C3—H3A108.7C11—C10—C9121.6 (3)
C4—C3—H3A108.7O3—C10—C9109.8 (3)
C2—C3—H3B108.7C10—C11—C6118.2 (3)
C4—C3—H3B108.7C10—C11—H11A120.9
H3A—C3—H3B107.6C6—C11—H11A120.9
C5—C4—C3115.1 (3)O3—C12—O2108.9 (3)
C5—C4—H4A108.5O3—C12—H12A109.9
C3—C4—H4A108.5O2—C12—H12A109.9
C5—C4—H4B108.5O3—C12—H12B109.9
C3—C4—H4B108.5O2—C12—H12B109.9
H4A—C4—H4B107.5H12A—C12—H12B108.3
O1—C5—C6120.1 (3)
C1—C2—C3—C4−177.5 (3)C12—O2—C9—C100.9 (4)
C2—C3—C4—C5−179.0 (3)C12—O3—C10—C11180.0 (4)
C3—C4—C5—O18.2 (5)C12—O3—C10—C9−1.2 (4)
C3—C4—C5—C6−173.9 (3)C8—C9—C10—C11−1.8 (5)
O1—C5—C6—C7176.7 (3)O2—C9—C10—C11179.1 (3)
C4—C5—C6—C7−1.3 (5)C8—C9—C10—O3179.3 (3)
O1—C5—C6—C11−4.6 (5)O2—C9—C10—O30.2 (4)
C4—C5—C6—C11177.5 (3)O3—C10—C11—C6179.0 (3)
C11—C6—C7—C80.4 (5)C9—C10—C11—C60.2 (5)
C5—C6—C7—C8179.1 (3)C7—C6—C11—C100.4 (5)
C6—C7—C8—C9−1.8 (5)C5—C6—C11—C10−178.4 (3)
C7—C8—C9—O2−178.6 (3)C10—O3—C12—O21.8 (4)
C7—C8—C9—C102.5 (5)C9—O2—C12—O3−1.7 (4)
C12—O2—C9—C8−178.1 (4)
D—H···AD—HH···AD···AD—H···A
C8—H8A···O1i0.932.603.419 (4)148
C3—H3A···Cg2ii0.972.993.831 (3)145
C12—H12A···Cg2iii0.972.843.633 (3)139
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C8—H8A⋯O1i0.932.603.419 (4)148
C3—H3ACg2ii0.972.993.831 (3)145
C12—H12ACg2iii0.972.843.633 (3)139

Symmetry codes: (i) ; (ii) ; (iii) . Cg2 is the centroid of the C6–C11 ring.

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