Literature DB >> 21581620

3-Nitro-benzaldehyde thio-semicarbazone.

De-Hong Wu1, Zhu-Feng Li, You-Hong Zhang.   

Abstract

The mol-ecule of the title compound, C(8)H(8)N(4)O(2)S, adopts an E configuration about both the C-n class="Chemical">N bonds. In the crystal structure, adjacent mol-ecules are linked by inter-molecular N-H⋯S hydrogen-bonding inter-actions, forming chains running parallel to the b axis.

Entities:  

Year:  2008        PMID: 21581620      PMCID: PMC2968075          DOI: 10.1107/S1600536808042645

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to thio­semicarbazone compounds, see: Casas et al. (2000 ▶); Tarafder et al. (2000 ▶); Deschamps et al. (2003 ▶); Liu et al. (1999 ▶); Wu et al. (2000 ▶). For similar structures, see: Sutton (1965 ▶).

Experimental

Crystal data

C8H8N4O2S M = 224.25 Monoclinic, a = 13.276 (3) Å b = 8.225 (7) Å c = 10.491 (4) Å β = 112.78 (5)° V = 1056.2 (11) Å3 Z = 4 Mo Kα radiation μ = 0.29 mm−1 T = 291 (2) K 0.20 × 0.20 × 0.20 mm

Data collection

Rigaku Mercury2 diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.930, T max = 0.940 9317 measured reflections 2071 independent reflections 1343 reflections with I > 2σ(I) R int = 0.081

Refinement

R[F 2 > 2σ(F 2)] = 0.069 wR(F 2) = 0.117 S = 1.01 2071 reflections 136 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.18 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808042645/rz2279sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808042645/rz2279Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H8N4O2SF(000) = 464
Mr = 224.25Dx = 1.410 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1712 reflections
a = 13.276 (3) Åθ = 3.0–27.4°
b = 8.225 (7) ŵ = 0.29 mm1
c = 10.491 (4) ÅT = 291 K
β = 112.78 (5)°Block, yellow
V = 1056.2 (11) Å30.20 × 0.20 × 0.20 mm
Z = 4
Rigaku Mercury2 diffractometer2071 independent reflections
Radiation source: fine-focus sealed tube1343 reflections with I > 2σ(I)
graphiteRint = 0.081
Detector resolution: 13.6612 pixels mm-1θmax = 26.0°, θmin = 3.0°
CCD_Profile_fitting scansh = −16→16
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −10→10
Tmin = 0.930, Tmax = 0.940l = −12→12
9317 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.069Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.117H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0122P)2 + 1.5479P] where P = (Fo2 + 2Fc2)/3
2071 reflections(Δ/σ)max < 0.001
136 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.18 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.9248 (3)1.1141 (4)1.1340 (3)0.0416 (8)
C20.8132 (3)0.8365 (4)0.8634 (3)0.0444 (9)
H2A0.84060.74290.91490.053*
C30.7415 (3)0.8218 (4)0.7163 (3)0.0412 (9)
C40.7111 (3)0.6666 (4)0.6615 (3)0.0441 (9)
H4A0.73750.57430.71530.053*
C50.6401 (3)0.6545 (5)0.5237 (4)0.0476 (10)
C60.5984 (3)0.7864 (5)0.4403 (4)0.0584 (11)
H6A0.55010.77330.34900.070*
C70.6301 (3)0.9401 (5)0.4955 (4)0.0603 (12)
H7A0.60361.03140.44040.072*
C80.7017 (3)0.9588 (5)0.6334 (4)0.0512 (10)
H8A0.72291.06220.66970.061*
N10.8999 (3)1.2497 (4)1.0619 (3)0.0572 (10)
H1A0.86911.24600.97320.069*
H1B0.91451.34201.10360.069*
N20.9000 (2)0.9732 (3)1.0633 (3)0.0425 (8)
H2B0.92220.88231.10550.051*
N30.8385 (2)0.9751 (3)0.9216 (3)0.0411 (7)
N40.6100 (3)0.4887 (5)0.4659 (4)0.0656 (10)
O10.6466 (3)0.3718 (4)0.5411 (4)0.0905 (11)
O20.5489 (3)0.4772 (5)0.3440 (3)0.1039 (13)
S10.98388 (9)1.10945 (12)1.30902 (9)0.0529 (3)
U11U22U33U12U13U23
C10.046 (2)0.038 (2)0.0381 (19)−0.0034 (18)0.0136 (17)0.0019 (17)
C20.048 (2)0.041 (2)0.0373 (19)0.0029 (18)0.0093 (17)0.0012 (17)
C30.045 (2)0.044 (2)0.0326 (18)−0.0016 (17)0.0121 (17)−0.0025 (16)
C40.043 (2)0.047 (2)0.041 (2)0.0013 (17)0.0138 (18)−0.0016 (17)
C50.038 (2)0.056 (3)0.047 (2)−0.0044 (18)0.0144 (18)−0.0142 (19)
C60.048 (3)0.077 (3)0.040 (2)0.003 (2)0.007 (2)−0.008 (2)
C70.063 (3)0.061 (3)0.046 (2)0.016 (2)0.010 (2)0.009 (2)
C80.054 (3)0.047 (2)0.045 (2)0.0008 (19)0.0120 (19)−0.0025 (18)
N10.084 (3)0.0394 (19)0.0371 (17)−0.0042 (17)0.0120 (18)−0.0012 (14)
N20.054 (2)0.0345 (17)0.0332 (16)−0.0005 (14)0.0102 (15)−0.0003 (13)
N30.0443 (19)0.0418 (18)0.0335 (15)−0.0040 (14)0.0110 (14)−0.0023 (13)
N40.056 (3)0.076 (3)0.063 (3)−0.017 (2)0.022 (2)−0.029 (2)
O10.107 (3)0.056 (2)0.095 (3)−0.016 (2)0.024 (2)−0.0196 (19)
O20.104 (3)0.110 (3)0.069 (2)−0.028 (2)0.003 (2)−0.042 (2)
S10.0735 (7)0.0436 (5)0.0345 (5)−0.0028 (5)0.0130 (5)−0.0035 (4)
C1—N11.316 (4)C6—C71.386 (5)
C1—N21.346 (4)C6—H6A0.9300
C1—S11.695 (3)C7—C81.398 (5)
C2—N31.276 (4)C7—H7A0.9300
C2—C31.471 (4)C8—H8A0.9300
C2—H2A0.9300N1—H1A0.8600
C3—C41.394 (5)N1—H1B0.8600
C3—C81.396 (5)N2—N31.392 (4)
C4—C51.391 (5)N2—H2B0.8600
C4—H4A0.9300N4—O11.219 (5)
C5—C61.369 (5)N4—O21.225 (4)
C5—N41.483 (5)
N1—C1—N2117.4 (3)C7—C6—H6A120.9
N1—C1—S1123.3 (3)C6—C7—C8120.5 (4)
N2—C1—S1119.3 (3)C6—C7—H7A119.8
N3—C2—C3121.3 (3)C8—C7—H7A119.8
N3—C2—H2A119.4C3—C8—C7119.9 (4)
C3—C2—H2A119.4C3—C8—H8A120.1
C4—C3—C8120.2 (3)C7—C8—H8A120.1
C4—C3—C2118.3 (3)C1—N1—H1A120.0
C8—C3—C2121.5 (3)C1—N1—H1B120.0
C5—C4—C3117.8 (3)H1A—N1—H1B120.0
C5—C4—H4A121.1C1—N2—N3119.7 (3)
C3—C4—H4A121.1C1—N2—H2B120.1
C6—C5—C4123.5 (4)N3—N2—H2B120.1
C6—C5—N4119.3 (3)C2—N3—N2116.0 (3)
C4—C5—N4117.2 (4)O1—N4—O2123.5 (4)
C5—C6—C7118.3 (4)O1—N4—C5118.9 (3)
C5—C6—H6A120.9O2—N4—C5117.6 (4)
N3—C2—C3—C4−175.8 (4)C2—C3—C8—C7−177.4 (4)
N3—C2—C3—C82.5 (6)C6—C7—C8—C3−0.1 (6)
C8—C3—C4—C5−0.6 (5)N1—C1—N2—N3−7.7 (5)
C2—C3—C4—C5177.7 (3)S1—C1—N2—N3171.4 (2)
C3—C4—C5—C6−0.4 (6)C3—C2—N3—N2175.3 (3)
C3—C4—C5—N4178.9 (3)C1—N2—N3—C2−176.1 (3)
C4—C5—C6—C71.1 (6)C6—C5—N4—O1−179.3 (4)
N4—C5—C6—C7−178.2 (4)C4—C5—N4—O11.3 (6)
C5—C6—C7—C8−0.8 (6)C6—C5—N4—O20.5 (6)
C4—C3—C8—C70.9 (6)C4—C5—N4—O2−178.9 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1B···S1i0.862.563.369 (4)158
N2—H2B···S1ii0.862.563.394 (4)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1B⋯S1i0.862.563.369 (4)158
N2—H2B⋯S1ii0.862.563.394 (4)165

Symmetry codes: (i) ; (ii) .

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