Literature DB >> 21581592

4-Amino-3-ammonio-pyridinium dichloride.

Jian-Hua Qin1, Jian-Ge Wang.   

Abstract

The anions and cations of the title compound, C(5)H(9)N(3) (2+)·2Cl(-), are connected by two chloride-bridged three-centered N-H⋯Cl hydrogen bonds into a three-dimensional network. The aromatic rings are not involved in stacking inter-actions.

Entities:  

Year:  2008        PMID: 21581592      PMCID: PMC2968050          DOI: 10.1107/S1600536808041962

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond distances and angles in pyridine, derived from microwave spectra, see: Sørensen et al. (1974 ▶). For details of the N—H⋯Cl hydrogen bond in 4,4′-bipyridine compounds, see: Iyere et al. (2003 ▶). For N—H⋯Cl and secondary inter­actions in pyridinium chlorides, see: Jones et al. (2002 ▶); in 4-acetyl­pyridinium chloride, see: Kochel (2005 ▶). For N—H⋯Cl and O—H⋯Cl contacts in a triphenyl-pyridinium chloride (1/1) adduct, see: Sykora & Cioffi (2007 ▶).

Experimental

Crystal data

C5H9N3 2+·2Cl− M = 182.05 Monoclinic, a = 8.362 (2) Å b = 7.3218 (19) Å c = 13.239 (3) Å β = 92.065 (4)° V = 810.0 (4) Å3 Z = 4 Mo Kα radiation μ = 0.73 mm−1 T = 296 (2) K 0.41 × 0.31 × 0.07 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1997 ▶) T min = 0.734, T max = 0.948 3949 measured reflections 1494 independent reflections 1345 reflections with I > 2σ(I) R int = 0.014

Refinement

R[F 2 > 2σ(F 2)] = 0.025 wR(F 2) = 0.068 S = 1.14 1494 reflections 92 parameters H-atom parameters constrained Δρmax = 0.24 e Å−3 Δρmin = −0.25 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808041962/si2142sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808041962/si2142Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C5H9N32+·2ClF(000) = 376
Mr = 182.05Dx = 1.493 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2439 reflections
a = 8.362 (2) Åθ = 3.1–28.2°
b = 7.3218 (19) ŵ = 0.73 mm1
c = 13.239 (3) ÅT = 296 K
β = 92.065 (4)°Block, colorless
V = 810.0 (4) Å30.41 × 0.31 × 0.07 mm
Z = 4
Bruker SMART CCD area-detector diffractometer1494 independent reflections
Radiation source: fine-focus sealed tube1345 reflections with I > 2σ(I)
graphiteRint = 0.014
φ and ω scansθmax = 25.5°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Bruker, 1997)h = −10→9
Tmin = 0.734, Tmax = 0.948k = −6→8
3949 measured reflectionsl = −16→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.025Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.068H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.0285P)2 + 0.2927P] where P = (Fo2 + 2Fc2)/3
1494 reflections(Δ/σ)max = 0.001
92 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.24 e Å3
xyzUiso*/Ueq
Cl10.05806 (5)0.10977 (6)0.30663 (3)0.03884 (15)
Cl20.51526 (5)0.00029 (6)0.35359 (3)0.03603 (14)
N10.26647 (16)0.68257 (19)0.30328 (10)0.0320 (3)
H1A0.32910.62810.25940.048*
H1B0.30260.79490.31600.048*
H1C0.16700.68870.27720.048*
N20.11914 (19)0.8105 (2)0.48188 (12)0.0439 (4)
H2A0.11820.87730.42840.053*
H2B0.07370.84850.53520.053*
N30.33856 (18)0.3102 (2)0.48536 (11)0.0376 (4)
H30.38610.20610.48690.045*
C10.3383 (2)0.4103 (2)0.40010 (13)0.0329 (4)
H10.38660.36490.34310.039*
C20.26762 (18)0.5778 (2)0.39701 (12)0.0271 (3)
C30.19067 (19)0.6488 (2)0.48205 (12)0.0296 (4)
C40.1921 (2)0.5357 (2)0.56891 (13)0.0366 (4)
H40.14220.57510.62670.044*
C50.2655 (2)0.3703 (2)0.56862 (14)0.0391 (4)
H50.26560.29760.62620.047*
U11U22U33U12U13U23
Cl10.0414 (3)0.0428 (3)0.0324 (2)0.00951 (19)0.00267 (18)−0.00166 (18)
Cl20.0410 (3)0.0298 (2)0.0379 (2)0.00388 (17)0.01080 (18)0.00231 (17)
N10.0335 (7)0.0344 (8)0.0283 (7)0.0006 (6)0.0044 (6)−0.0002 (6)
N20.0617 (10)0.0360 (8)0.0348 (8)0.0202 (8)0.0147 (7)0.0032 (7)
N30.0403 (8)0.0265 (7)0.0462 (9)0.0089 (6)0.0023 (7)0.0007 (6)
C10.0319 (9)0.0323 (9)0.0346 (9)0.0018 (7)0.0031 (7)−0.0054 (7)
C20.0260 (8)0.0283 (8)0.0270 (8)−0.0013 (6)0.0012 (6)−0.0008 (6)
C30.0309 (8)0.0274 (8)0.0306 (8)0.0029 (7)0.0017 (7)−0.0016 (7)
C40.0434 (10)0.0377 (10)0.0291 (9)0.0069 (8)0.0069 (7)0.0021 (7)
C50.0459 (10)0.0366 (10)0.0349 (10)0.0038 (8)0.0013 (8)0.0077 (8)
N1—C21.458 (2)N3—H30.8600
N1—H1A0.8900C1—C21.361 (2)
N1—H1B0.8900C1—H10.9300
N1—H1C0.8900C2—C31.416 (2)
N2—C31.326 (2)C3—C41.417 (2)
N2—H2A0.8600C4—C51.358 (3)
N2—H2B0.8600C4—H40.9300
N3—C11.346 (2)C5—H50.9300
N3—C51.353 (2)
C2—N1—H1A109.5C2—C1—H1119.9
C2—N1—H1B109.5C1—C2—C3121.06 (15)
H1A—N1—H1B109.5C1—C2—N1119.26 (14)
C2—N1—H1C109.5C3—C2—N1119.65 (14)
H1A—N1—H1C109.5N2—C3—C2122.95 (15)
H1B—N1—H1C109.5N2—C3—C4120.92 (15)
C3—N2—H2A120.0C2—C3—C4116.12 (15)
C3—N2—H2B120.0C5—C4—C3120.64 (16)
H2A—N2—H2B120.0C5—C4—H4119.7
C1—N3—C5121.29 (15)C3—C4—H4119.7
C1—N3—H3119.4N3—C5—C4120.64 (16)
C5—N3—H3119.4N3—C5—H5119.7
N3—C1—C2120.23 (16)C4—C5—H5119.7
N3—C1—H1119.9
C5—N3—C1—C21.9 (3)N1—C2—C3—C4177.72 (15)
N3—C1—C2—C3−1.2 (2)N2—C3—C4—C5179.99 (18)
N3—C1—C2—N1−178.99 (14)C2—C3—C4—C50.7 (3)
C1—C2—C3—N2−179.35 (16)C1—N3—C5—C4−1.2 (3)
N1—C2—C3—N2−1.6 (2)C3—C4—C5—N3−0.1 (3)
C1—C2—C3—C4−0.1 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1A···Cl2i0.892.223.1142 (15)178
N1—H1B···Cl2ii0.892.373.1754 (16)151
N1—H1C···Cl1iii0.892.233.0790 (16)160
N2—H2A···Cl1ii0.862.393.2188 (17)163
N2—H2B···Cl1iv0.862.423.2672 (17)168
N3—H3···Cl20.862.593.2499 (16)135
N3—H3···Cl2v0.862.703.3198 (16)130
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯Cl2i0.892.223.1142 (15)178
N1—H1B⋯Cl2ii0.892.373.1754 (16)151
N1—H1C⋯Cl1iii0.892.233.0790 (16)160
N2—H2A⋯Cl1ii0.862.393.2188 (17)163
N2—H2B⋯Cl1iv0.862.423.2672 (17)168
N3—H3⋯Cl20.862.593.2499 (16)135
N3—H3⋯Cl2v0.862.703.3198 (16)130

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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