Literature DB >> 21581542

Poly[diaqua-μ-oxalato-μ-pyrazine-2-carbox-yl-ato-lanthanum(III)].

Lu Han, Qun-Hui Meng, Jian-Dong Hao, Yi-Fan Luo, Rong-Hua Zeng.   

Abstract

In the title complex, [La(C(5)H(3)N(2)O(2))(C(2)O(4))(H(2)O)(2)](n), the La(III) ion is coordinated by one N and three O atoms from two pyrazine-2-carboxylate ligands, by four O atoms from two oxalate ligands and by two O atoms of two water molecules, displaying a distorted bicapped square-anti-prismatic geometry. The carboxyl-ate groups of pyrazine-2-carboxyl-ate and oxalate ligands link the lanthanum metal centres, forming layers parallel to (10). The layers are further connected by inter-molecular O-H⋯O and N-H⋯O hydrogen-bonding inter-actions, forming a three-dimensional supra-molecular network.

Entities:  

Year:  2008        PMID: 21581542      PMCID: PMC2967913          DOI: 10.1107/S1600536808041664

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Eddaoudi et al. (2001 ▶); Rizk et al. (2005 ▶); Zeng et al. (2007 ▶).

Experimental

Crystal data

[La(C5H3N2O2)(C2O4)(H2O)2] M = 386.06 Triclinic, a = 8.040 (3) Å b = 8.7343 (18) Å c = 8.8329 (18) Å α = 115.552 (2)° β = 101.447 (3)° γ = 95.789 (3)° V = 536.1 (3) Å3 Z = 2 Mo Kα radiation μ = 4.02 mm−1 T = 296 (2) K 0.17 × 0.16 × 0.14 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (APEX2; Bruker, 2004 ▶) T min = 0.548, T max = 0.603 (expected range = 0.518–0.569) 2761 measured reflections 1898 independent reflections 1787 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.078 S = 1.07 1898 reflections 163 parameters 6 restraints H-atom parameters constrained Δρmax = 1.61 e Å−3 Δρmin = −1.22 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), PLATON (Spek, 2003 ▶) and SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808041664/dn2413sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808041664/dn2413Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[La(C5H3N2O2)(C2O4)(H2O)2]Z = 2
Mr = 386.06F(000) = 368
Triclinic, P1Dx = 2.391 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.040 (3) ÅCell parameters from 6377 reflections
b = 8.7343 (18) Åθ = 1.7–28.0°
c = 8.8329 (18) ŵ = 4.02 mm1
α = 115.552 (2)°T = 296 K
β = 101.447 (3)°Block, colourless
γ = 95.789 (3)°0.17 × 0.16 × 0.14 mm
V = 536.1 (3) Å3
Bruker APEXII area-detector diffractometer1898 independent reflections
Radiation source: fine-focus sealed tube1787 reflections with I > 2σ(I)
graphiteRint = 0.020
φ and ω scansθmax = 25.2°, θmin = 2.6°
Absorption correction: multi-scan (APEX2; Bruker, 2004)h = −5→9
Tmin = 0.548, Tmax = 0.603k = −10→10
2761 measured reflectionsl = −10→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.078H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0533P)2] where P = (Fo2 + 2Fc2)/3
1898 reflections(Δ/σ)max < 0.001
163 parametersΔρmax = 1.61 e Å3
6 restraintsΔρmin = −1.22 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.2750 (6)0.2794 (6)0.7523 (6)0.0218 (10)
C20.2577 (7)0.4053 (7)0.9066 (7)0.0285 (11)
H20.31910.41221.01110.034*
C30.0676 (7)0.4974 (7)0.7564 (7)0.0304 (12)
H3−0.00790.57060.75290.036*
C40.0849 (7)0.3716 (7)0.6014 (7)0.0289 (11)
H40.02020.36210.49680.035*
C50.5718 (6)0.4928 (6)0.5701 (6)0.0204 (10)
C60.0553 (6)−0.0282 (6)−0.0653 (6)0.0218 (10)
C70.3936 (6)0.1564 (7)0.7458 (6)0.0238 (10)
La10.33941 (3)0.08521 (3)0.32247 (3)0.01745 (13)
N10.1560 (6)0.5173 (6)0.9109 (6)0.0284 (10)
N80.1914 (5)0.2634 (5)0.5974 (5)0.0235 (9)
O10.3920 (5)0.0398 (4)0.5980 (4)0.0248 (8)
O20.4933 (5)0.1760 (5)0.8841 (5)0.0314 (8)
O30.5571 (5)0.3495 (4)0.5715 (4)0.0246 (7)
O40.6879 (4)0.6241 (4)0.6678 (4)0.0264 (8)
O5−0.0155 (4)−0.0721 (5)−0.2201 (4)0.0299 (8)
O60.2119 (4)−0.0240 (5)−0.0025 (4)0.0292 (8)
O1W0.2022 (5)−0.2208 (4)0.2499 (4)0.0271 (8)
O2W0.5746 (5)0.1980 (5)0.2097 (4)0.0300 (8)
H1W0.1827−0.29130.14410.045*
H3W0.52930.20790.12100.045*
H2W0.2583−0.26300.30710.045*
H4W0.66110.15340.19000.045*
U11U22U33U12U13U23
C10.018 (2)0.027 (2)0.021 (2)0.007 (2)0.005 (2)0.012 (2)
C20.024 (3)0.033 (3)0.026 (3)0.008 (2)0.004 (2)0.012 (2)
C30.030 (3)0.030 (3)0.033 (3)0.012 (2)0.010 (2)0.014 (2)
C40.031 (3)0.033 (3)0.029 (3)0.017 (2)0.007 (2)0.018 (2)
C50.015 (2)0.025 (2)0.021 (2)0.0083 (19)0.005 (2)0.009 (2)
C60.017 (2)0.023 (2)0.024 (2)0.0043 (19)0.004 (2)0.010 (2)
C70.018 (2)0.033 (3)0.025 (3)0.005 (2)0.007 (2)0.016 (2)
La10.01352 (18)0.01999 (18)0.01806 (18)0.00464 (11)0.00163 (12)0.00898 (13)
N10.022 (2)0.027 (2)0.031 (2)0.0072 (18)0.0067 (19)0.0093 (19)
N80.022 (2)0.027 (2)0.023 (2)0.0084 (17)0.0035 (17)0.0132 (18)
O10.0267 (19)0.0270 (18)0.0238 (18)0.0104 (15)0.0089 (15)0.0126 (15)
O20.028 (2)0.046 (2)0.0244 (18)0.0153 (17)0.0049 (16)0.0195 (17)
O30.0261 (19)0.0225 (17)0.0260 (18)0.0047 (14)0.0020 (15)0.0143 (15)
O40.0196 (18)0.0241 (18)0.0316 (19)0.0037 (15)−0.0015 (15)0.0131 (16)
O50.0172 (18)0.049 (2)0.0197 (18)0.0097 (16)0.0016 (15)0.0132 (16)
O60.0147 (18)0.046 (2)0.0220 (17)0.0100 (16)0.0020 (14)0.0123 (16)
O1W0.0262 (19)0.0239 (18)0.0263 (18)0.0031 (15)0.0015 (15)0.0100 (15)
O2W0.027 (2)0.039 (2)0.0272 (19)0.0109 (17)0.0114 (16)0.0166 (17)
C1—N81.340 (6)C7—O11.259 (6)
C1—C21.378 (7)La1—O1W2.533 (3)
C1—C71.497 (7)La1—O4i2.536 (3)
C2—N11.330 (7)La1—O62.544 (3)
C2—H20.9300La1—O32.551 (3)
C3—N11.336 (7)La1—O5ii2.555 (4)
C3—C41.382 (7)La1—O12.592 (3)
C3—H30.9300La1—O2W2.600 (4)
C4—N81.332 (7)La1—O1iii2.623 (3)
C4—H40.9300La1—N82.828 (4)
C5—O41.242 (6)La1—O2iii2.889 (4)
C5—O31.250 (6)La1—C7iii3.124 (5)
C5—C5i1.574 (9)O1W—H1W0.8385
C6—O51.239 (6)O1W—H2W0.8353
C6—O61.261 (6)O2W—H3W0.8400
C6—C6ii1.539 (9)O2W—H4W0.8421
C7—O21.252 (6)
N8—C1—C2122.0 (5)O5ii—La1—O1iii154.21 (12)
N8—C1—C7115.3 (4)O1—La1—O1iii60.45 (13)
C2—C1—C7122.7 (5)O2W—La1—O1iii75.58 (11)
N1—C2—C1122.1 (5)O1W—La1—N897.55 (12)
N1—C2—H2118.9O4i—La1—N872.37 (12)
C1—C2—H2118.9O6—La1—N8128.17 (11)
N1—C3—C4122.0 (5)O3—La1—N868.57 (12)
N1—C3—H3119.0O5ii—La1—N866.44 (11)
C4—C3—H3119.0O1—La1—N858.52 (11)
N8—C4—C3121.9 (5)O2W—La1—N8131.02 (12)
N8—C4—H4119.0O1iii—La1—N8115.86 (11)
C3—C4—H4119.0O1W—La1—O2iii66.41 (11)
O4—C5—O3126.6 (4)O4i—La1—O2iii129.49 (11)
O4—C5—C5i117.0 (5)O6—La1—O2iii68.05 (11)
O3—C5—C5i116.4 (5)O3—La1—O2iii112.40 (11)
O5—C6—O6126.1 (4)O5ii—La1—O2iii121.50 (11)
O5—C6—C6ii118.0 (5)O1—La1—O2iii99.45 (10)
O6—C6—C6ii115.9 (5)O2W—La1—O2iii65.10 (11)
O2—C7—O1122.7 (5)O1iii—La1—O2iii46.83 (10)
O2—C7—C1119.7 (5)N8—La1—O2iii157.23 (11)
O1—C7—C1117.5 (4)O1W—La1—C7iii68.77 (12)
O2—C7—La1iii67.6 (3)O4i—La1—C7iii137.10 (12)
O1—C7—La1iii55.5 (3)O6—La1—C7iii91.66 (12)
C1—C7—La1iii169.0 (3)O3—La1—C7iii95.00 (12)
O1W—La1—O4i150.33 (12)O5ii—La1—C7iii139.98 (12)
O1W—La1—O682.82 (11)O1—La1—C7iii78.74 (11)
O4i—La1—O682.26 (12)O2W—La1—C7iii70.04 (12)
O1W—La1—O3139.37 (10)O1iii—La1—C7iii23.29 (11)
O4i—La1—O363.95 (11)N8—La1—C7iii136.97 (12)
O6—La1—O3136.33 (11)O2iii—La1—C7iii23.62 (11)
O1W—La1—O5ii77.14 (12)C2—N1—C3116.0 (5)
O4i—La1—O5ii73.25 (12)C4—N8—C1115.9 (4)
O6—La1—O5ii63.19 (11)C4—N8—La1126.3 (3)
O3—La1—O5ii124.85 (11)C1—N8—La1114.8 (3)
O1W—La1—O168.69 (11)C7—O1—La1122.9 (3)
O4i—La1—O1122.78 (11)C7—O1—La1iii101.2 (3)
O6—La1—O1151.51 (12)La1—O1—La1iii119.55 (13)
O3—La1—O171.74 (11)C7—O2—La1iii88.8 (3)
O5ii—La1—O1108.11 (11)C5—O3—La1120.1 (3)
O1W—La1—O2W130.93 (11)C5—O4—La1i120.6 (3)
O4i—La1—O2W67.57 (12)C6—O5—La1ii121.0 (3)
O6—La1—O2W72.86 (11)C6—O6—La1121.8 (3)
O3—La1—O2W69.18 (11)La1—O1W—H1W113.1
O5ii—La1—O2W123.82 (12)La1—O1W—H2W115.0
O1—La1—O2W126.58 (11)H1W—O1W—H2W107.3
O1W—La1—O1iii77.11 (11)La1—O2W—H3W111.1
O4i—La1—O1iii132.53 (11)La1—O2W—H4W123.8
O6—La1—O1iii114.65 (11)H3W—O2W—H4W106.5
O3—La1—O1iii75.79 (11)
D—H···AD—HH···AD···AD—H···A
O1W—H1W···N1iv0.841.972.796 (6)170
O2W—H3W···O2v0.841.942.737 (5)157
O1W—H2W···O3iii0.842.052.874 (5)167
O2W—H4W···O6vi0.842.092.825 (5)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1W⋯N1i0.841.972.796 (6)170
O2W—H3W⋯O2ii0.841.942.737 (5)157
O1W—H2W⋯O3iii0.842.052.874 (5)167
O2W—H4W⋯O6iv0.842.092.825 (5)146

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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