Literature DB >> 21581515

Di-μ-sulfato-bis-[diaqua-(1H-imidazo[4,5-f][1,10]phenanthroline)nickel(II)] dihydrate.

Wei Zeng, Jin-Hua She, Cui-Juan Wang, Yi Fang.   

Abstract

In the title compound, [Ni(2)(SO(4))(2)(C(13)H(8)N(4))(2)(H(2)O)(4)]·2H(2)O, the complete dimeric complex is generated by an inversion center. The n class="Chemical">Ni(II) atoms are octa-hedrally coordinated by two N atoms from one 1H-imidazo[4,5-f][1,10]phenanthroline (IP) ligand and two O atoms from two adjacent sulfate ions forming the equatorial plane, with two coordinated water mol-ecules in the axial sites. Both of the sulfate ions act as bidentate-bridging ligands connecting the two Ni(II) ions, thus generating a binuclear complex. In the crystal structure, O-H⋯O and O-H⋯N hydrogen bonds involving the coordinated and uncoordinated water mol-ecules and N-H⋯O links lead to the formation of a two-dimensional sheet structure developing parallel to (010). Weak π-π stacking inter-actions [centroid-centroid separation = 3.613 (2) Å] between the IP ligands also occur.

Entities:  

Year:  2008        PMID: 21581515      PMCID: PMC2967888          DOI: 10.1107/S1600536808040634

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: An et al. (2007 ▶); Gu et al. (2004 ▶). For general background, see: Ross et al. (1999 ▶); Xu et al. (2003 ▶); Xiong et al. (1999 ▶). For details of graph-set theory, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

[Ni2(SO4)2(C13H8N4)2(H2O)4]·2H2O M = 858.10 Monoclinic, a = 10.296 (2) Å b = 9.0560 (18) Å c = 16.836 (3) Å β = 99.108 (3)° V = 1550.0 (5) Å3 Z = 2 Mo Kα radiation μ = 1.44 mm−1 T = 298 (2) K 0.28 × 0.20 × 0.13 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.689, T max = 0.835 7756 measured reflections 2887 independent reflections 2085 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.146 S = 0.81 2887 reflections 236 parameters H-atom parameters constrained Δρmax = 0.47 e Å−3 Δρmin = −0.41 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808040634/hb2874sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808040634/hb2874Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni2(SO4)2(C13H8N4)2(H2O)4]·2H2OF(000) = 880
Mr = 858.10Dx = 1.839 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2887 reflections
a = 10.296 (2) Åθ = 2.5–25.5°
b = 9.0560 (18) ŵ = 1.44 mm1
c = 16.836 (3) ÅT = 298 K
β = 99.108 (3)°Block, green
V = 1550.0 (5) Å30.28 × 0.20 × 0.13 mm
Z = 2
Bruker APEXII CCD diffractometer2887 independent reflections
Radiation source: fine-focus sealed tube2085 reflections with I > 2σ(I)
graphiteRint = 0.040
φ and ω scansθmax = 25.5°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −12→11
Tmin = 0.689, Tmax = 0.835k = −8→10
7756 measured reflectionsl = −20→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.146H-atom parameters constrained
S = 0.81w = 1/[σ2(Fo2) + (0.127P)2] where P = (Fo2 + 2Fc2)/3
2887 reflections(Δ/σ)max < 0.001
236 parametersΔρmax = 0.47 e Å3
0 restraintsΔρmin = −0.40 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.18902 (5)0.68064 (6)0.04131 (3)0.0299 (2)
S1−0.03201 (9)0.60119 (10)−0.11230 (5)0.0263 (3)
N10.2570 (3)0.9021 (4)0.03289 (18)0.0266 (7)
N20.3746 (3)0.6769 (3)0.11665 (19)0.0275 (7)
N30.6436 (3)1.2065 (4)0.1392 (2)0.0338 (8)
N40.7470 (3)1.0131 (4)0.20327 (19)0.0340 (8)
H4A0.80770.96270.23210.034 (12)*
O1W0.0747 (3)0.7638 (4)0.12140 (18)0.0487 (9)
H1WA0.07830.84000.14570.058*
H1WB0.03400.68940.12480.058*
O2W0.2961 (3)0.5649 (3)−0.03940 (15)0.0342 (7)
H2WA0.31370.6304−0.06780.041*
H2WB0.22810.5421−0.06660.041*
O2−0.0906 (3)0.6771 (3)−0.18632 (17)0.0401 (8)
O40.0613 (3)0.4873 (3)−0.13353 (15)0.0311 (6)
O10.0382 (2)0.7092 (3)−0.05661 (16)0.0300 (6)
O3W0.0861 (4)0.0146 (4)0.20094 (19)0.0661 (11)
H3WB0.08730.10250.19630.079*
H3WA0.07900.01370.24760.079*
C10.1913 (4)1.0142 (5)−0.0056 (2)0.0314 (9)
H1A0.10830.9961−0.03470.038*
C20.2408 (4)1.1571 (5)−0.0042 (2)0.0339 (10)
H2A0.19151.2325−0.03180.041*
C30.3637 (4)1.1857 (4)0.0385 (2)0.0308 (9)
H3A0.39891.28040.03950.037*
C40.4353 (3)1.0702 (4)0.0806 (2)0.0263 (9)
C50.3759 (3)0.9290 (4)0.0770 (2)0.0231 (8)
C60.4416 (4)0.8062 (4)0.1208 (2)0.0250 (8)
C70.4319 (4)0.5593 (5)0.1541 (2)0.0337 (9)
H7A0.38600.47050.15050.040*
C80.5586 (4)0.5636 (5)0.1988 (2)0.0358 (10)
H8A0.59600.47900.22410.043*
C90.6267 (4)0.6942 (4)0.2048 (2)0.0323 (10)
H9A0.71070.69930.23470.039*
C100.5692 (4)0.8195 (4)0.1657 (2)0.0250 (8)
C110.6261 (4)0.9622 (5)0.1659 (2)0.0300 (9)
C120.5625 (4)1.0813 (4)0.1265 (2)0.0291 (9)
C130.7502 (4)1.1573 (5)0.1853 (3)0.0378 (10)
H13A0.82181.21750.20390.045*
O3−0.1354 (3)0.5305 (3)−0.07522 (17)0.0352 (7)
U11U22U33U12U13U23
Ni10.0279 (3)0.0279 (4)0.0327 (3)−0.0050 (2)0.0010 (2)−0.0018 (2)
S10.0263 (5)0.0234 (6)0.0273 (5)−0.0047 (4)−0.0016 (4)0.0013 (4)
N10.0259 (17)0.0269 (19)0.0260 (16)−0.0023 (14)0.0013 (13)0.0010 (14)
N20.0265 (17)0.0267 (19)0.0294 (17)−0.0031 (14)0.0046 (14)−0.0015 (14)
N30.033 (2)0.033 (2)0.0345 (19)−0.0099 (15)0.0029 (16)−0.0019 (15)
N40.0277 (18)0.040 (2)0.0310 (17)−0.0034 (16)−0.0053 (15)0.0003 (16)
O1W0.061 (2)0.0305 (18)0.061 (2)−0.0183 (16)0.0311 (18)−0.0190 (16)
O2W0.0315 (15)0.0345 (17)0.0370 (15)−0.0029 (13)0.0061 (13)−0.0004 (12)
O20.0454 (19)0.0349 (18)0.0342 (16)−0.0055 (13)−0.0118 (14)0.0063 (13)
O40.0293 (15)0.0253 (15)0.0375 (15)−0.0050 (12)0.0021 (12)−0.0043 (12)
O10.0253 (14)0.0252 (15)0.0348 (15)−0.0025 (11)−0.0096 (12)−0.0042 (11)
O3W0.126 (4)0.0292 (19)0.0479 (19)−0.015 (2)0.028 (2)−0.0107 (16)
C10.023 (2)0.033 (2)0.036 (2)−0.0010 (17)−0.0009 (16)0.0032 (18)
C20.034 (2)0.031 (2)0.034 (2)0.0067 (18)−0.0012 (18)0.0047 (18)
C30.036 (2)0.019 (2)0.036 (2)−0.0032 (17)0.0020 (18)−0.0029 (17)
C40.025 (2)0.028 (2)0.0251 (18)−0.0012 (16)0.0022 (16)−0.0029 (16)
C50.0232 (19)0.021 (2)0.0240 (18)−0.0031 (15)0.0006 (15)0.0002 (15)
C60.026 (2)0.025 (2)0.0239 (19)−0.0050 (16)0.0027 (16)−0.0018 (15)
C70.038 (2)0.027 (2)0.035 (2)−0.0067 (18)0.0029 (18)0.0014 (18)
C80.039 (2)0.029 (2)0.038 (2)0.0085 (19)0.0021 (19)0.0065 (18)
C90.024 (2)0.038 (3)0.032 (2)−0.0001 (18)−0.0031 (17)−0.0009 (18)
C100.027 (2)0.025 (2)0.0236 (18)−0.0011 (16)0.0045 (16)−0.0009 (15)
C110.024 (2)0.039 (2)0.0252 (19)−0.0072 (18)−0.0023 (16)−0.0030 (18)
C120.031 (2)0.030 (2)0.0265 (19)−0.0052 (17)0.0061 (16)−0.0013 (17)
C130.038 (3)0.035 (3)0.038 (2)−0.019 (2)−0.001 (2)−0.0038 (19)
O30.0311 (15)0.0242 (15)0.0521 (17)−0.0034 (12)0.0116 (13)0.0031 (13)
Ni1—O1W2.067 (3)O3W—H3WB0.8000
Ni1—O3i2.095 (3)O3W—H3WA0.8000
Ni1—O12.094 (3)C1—C21.390 (6)
Ni1—N22.120 (3)C1—H1A0.9300
Ni1—N12.136 (3)C2—C31.378 (6)
Ni1—O2W2.152 (3)C2—H2A0.9300
S1—O11.464 (3)C3—C41.405 (5)
S1—O31.464 (3)C3—H3A0.9300
S1—O21.467 (3)C4—C51.414 (5)
S1—O41.491 (3)C4—C121.415 (5)
N1—C11.330 (5)C5—C61.442 (5)
N1—C51.349 (5)C6—C101.413 (5)
N2—C71.327 (5)C7—C81.400 (6)
N2—C61.355 (5)C7—H7A0.9300
N3—C131.317 (5)C8—C91.371 (6)
N3—C121.405 (5)C8—H8A0.9300
N4—C131.341 (5)C9—C101.396 (5)
N4—C111.382 (5)C9—H9A0.9300
N4—H4A0.8600C10—C111.419 (5)
O1W—H1WA0.8000C11—C121.376 (6)
O1W—H1WB0.8000C13—H13A0.9300
O2W—H2WA0.8000O3—Ni1i2.095 (3)
O2W—H2WB0.8000
O1W—Ni1—O3i87.30 (12)N1—C1—H1A118.5
O1W—Ni1—O192.33 (12)C2—C1—H1A118.5
O3i—Ni1—O197.62 (11)C3—C2—C1119.2 (4)
O1W—Ni1—N299.67 (13)C3—C2—H2A120.4
O3i—Ni1—N294.22 (11)C1—C2—H2A120.4
O1—Ni1—N2163.51 (11)C2—C3—C4119.2 (4)
O1W—Ni1—N185.86 (12)C2—C3—H3A120.4
O3i—Ni1—N1168.08 (11)C4—C3—H3A120.4
O1—Ni1—N192.40 (11)C3—C4—C5117.6 (3)
N2—Ni1—N177.35 (12)C3—C4—C12126.1 (4)
O1W—Ni1—O2W172.06 (12)C5—C4—C12116.4 (3)
O3i—Ni1—O2W84.89 (10)N1—C5—C4122.4 (3)
O1—Ni1—O2W87.31 (11)N1—C5—C6117.0 (3)
N2—Ni1—O2W82.35 (11)C4—C5—C6120.7 (3)
N1—Ni1—O2W102.08 (11)N2—C6—C10121.6 (3)
O1—S1—O3109.72 (16)N2—C6—C5116.5 (3)
O1—S1—O2109.01 (16)C10—C6—C5121.9 (3)
O3—S1—O2109.77 (17)N2—C7—C8122.7 (4)
O1—S1—O4110.14 (15)N2—C7—H7A118.7
O3—S1—O4109.85 (16)C8—C7—H7A118.7
O2—S1—O4108.32 (17)C9—C8—C7119.1 (4)
C1—N1—C5118.5 (3)C9—C8—H8A120.5
C1—N1—Ni1127.0 (3)C7—C8—H8A120.5
C5—N1—Ni1114.3 (2)C8—C9—C10119.5 (4)
C7—N2—C6119.0 (3)C8—C9—H9A120.2
C7—N2—Ni1126.0 (3)C10—C9—H9A120.2
C6—N2—Ni1114.9 (3)C9—C10—C11126.5 (4)
C13—N3—C12103.7 (3)C9—C10—C6118.2 (3)
C13—N4—C11106.0 (3)C11—C10—C6115.3 (3)
C13—N4—H4A127.0N4—C11—C12106.5 (4)
C11—N4—H4A127.0N4—C11—C10130.3 (4)
Ni1—O1W—H1WA131.4C12—C11—C10123.2 (3)
Ni1—O1W—H1WB95.7C11—C12—N3109.4 (3)
H1WA—O1W—H1WB132.3C11—C12—C4122.4 (4)
Ni1—O2W—H2WA101.7N3—C12—C4128.1 (4)
Ni1—O2W—H2WB89.9N3—C13—N4114.4 (4)
H2WA—O2W—H2WB96.3N3—C13—H13A122.8
S1—O1—Ni1130.62 (17)N4—C13—H13A122.8
H3WB—O3W—H3WA96.4S1—O3—Ni1i139.12 (17)
N1—C1—C2123.1 (4)
D—H···AD—HH···AD···AD—H···A
N4—H4A···O2ii0.862.032.870 (5)165
O1W—H1WA···O3Wiii0.801.832.630 (4)180
O1W—H1WB···O4i0.801.892.695 (4)180
O1W—H1WB···O3i0.802.462.873 (4)114
O2W—H2WA···N3iv0.802.002.797 (4)179
O3W—H3WB···O2i0.802.002.803 (4)179
O3W—H3WA···O4v0.802.042.839 (4)180
O2W—H2WB···O40.801.962.764 (4)180
O2W—H2WB···O10.802.502.932 (4)115
Table 1

Selected bond lengths (Å)

Ni1—O1W2.067 (3)
Ni1—O3i2.095 (3)
Ni1—O12.094 (3)
Ni1—N22.120 (3)
Ni1—N12.136 (3)
Ni1—O2W2.152 (3)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N4—H4A⋯O2ii0.862.032.870 (5)165
O1W—H1WA⋯O3Wiii0.801.832.630 (4)180
O1W—H1WB⋯O4i0.801.892.695 (4)180
O1W—H1WB⋯O3i0.802.462.873 (4)114
O2W—H2WA⋯N3iv0.802.002.797 (4)179
O3W—H3WB⋯O2i0.802.002.803 (4)179
O3W—H3WA⋯O4v0.802.042.839 (4)180
O2W—H2WB⋯O40.801.962.764 (4)180
O2W—H2WB⋯O10.802.502.932 (4)115

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  Di-μ-sulfato-κO:O'-bis-[diaqua-(1H-imidazo[4,5-f][1,10]phenanthroline)manganese(II)] dihydrate.

Authors:  Ming-Xing Yang; Shen Lin; Li-Juan Chen; Xiao-Hua Chen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-18
  1 in total

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