Literature DB >> 21581491

Bis(μ-N,N'-di-3-pyridylpyridine-2,6-dicarboxamide)bis-[dichloridomercury(II)] N,N-dimethyl-formamide disolvate.

Li-Hua Huang1, Jie Wu.   

Abstract

The asymmetric unit of the binuclear title complex, [Hg(2)Cl(4)(C(17)H(13)N(5)O(2))(2)]·2C(3)H(7)NO, contains one-half of the centrosymmetric mol-ecule and one dimethyl-formamide solvent mol-ecule. The Hg(II) atom is four-coordinated by two N atoms from two ligands and two Cl atoms in a distorted tetra-hedral coordination geometry. Intra-molecular N-H⋯O hydrogen bonds may be effective in the stabilization of the structure. In the crystal structure, π-π contacts between pyridine rings [centroid-to-centroid distances 3.629 (3) and 3.595 (3) Å] may further stabilize the structure.

Entities:  

Year:  2008        PMID: 21581491      PMCID: PMC2967866          DOI: 10.1107/S1600536808040269

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Ockwig et al. (2005 ▶); Qin et al. (2003 ▶); Baer et al. (2002 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

[Hg2Cl4(C17H13N5O2)2]·2C3H7NO M = 1327.82 Triclinic, a = 7.4947 (15) Å b = 12.262 (3) Å c = 13.284 (3) Å α = 79.79 (3)° β = 73.74 (3)° γ = 76.21 (3)° V = 1130.2 (5) Å3 Z = 1 Mo Kα radiation μ = 7.08 mm−1 T = 294 (2) K 0.20 × 0.18 × 0.17 mm

Data collection

Rigaku Saturn 724 diffractometer Absorption correction: numerical (CrystalClear; Rigaku/MSC, 2006 ▶) T min = 0.332, T max = 0.379 12347 measured reflections 4422 independent reflections 3995 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.054 S = 1.03 4422 reflections 291 parameters H-atom parameters constrained Δρmax = 0.65 e Å−3 Δρmin = −0.83 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2006 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶) and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808040269/hk2534sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808040269/hk2534Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Hg2Cl4(C17H13N5O2)2]·2C3H7NOZ = 1
Mr = 1327.82F(000) = 640
Triclinic, P1Dx = 1.951 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.4947 (15) ÅCell parameters from 3289 reflections
b = 12.262 (3) Åθ = 2.9–26.0°
c = 13.284 (3) ŵ = 7.08 mm1
α = 79.79 (3)°T = 294 K
β = 73.74 (3)°Prism, colourless
γ = 76.21 (3)°0.20 × 0.18 × 0.17 mm
V = 1130.2 (5) Å3
Rigaku Saturn 724 diffractometer4422 independent reflections
Radiation source: fine-focus sealed tube3995 reflections with I > 2σ(I)
graphiteRint = 0.030
Detector resolution: 28.5714 pixels mm-1θmax = 26.0°, θmin = 2.9°
dtprofit.ref scansh = −9→9
Absorption correction: numerical (CrystalClear; Rigaku/MSC, 2006)k = −15→15
Tmin = 0.332, Tmax = 0.379l = −16→16
12347 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.054H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0195P)2 + 0.7349P] where P = (Fo2 + 2Fc2)/3
4422 reflections(Δ/σ)max = 0.002
291 parametersΔρmax = 0.65 e Å3
0 restraintsΔρmin = −0.83 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Hg10.47943 (3)0.144664 (13)0.675659 (12)0.04821 (7)
Cl10.39934 (16)−0.03890 (9)0.72493 (9)0.0566 (3)
Cl20.26095 (18)0.30392 (9)0.61184 (9)0.0611 (3)
O10.2543 (5)0.4774 (3)1.1235 (2)0.0738 (10)
O2−0.1219 (4)0.9357 (2)0.7985 (2)0.0511 (7)
O30.3641 (4)0.5771 (2)0.7182 (2)0.0546 (8)
N10.4906 (4)0.2103 (2)0.8281 (2)0.0358 (7)
N20.2824 (4)0.4689 (2)0.9507 (2)0.0337 (7)
H2A0.25840.50870.89410.040*
N30.1061 (4)0.6871 (2)0.9285 (2)0.0316 (7)
N40.0775 (4)0.7801 (2)0.7310 (2)0.0352 (7)
H4A0.14520.71510.74590.042*
N50.2361 (4)0.8435 (2)0.4443 (2)0.0387 (7)
N60.6833 (5)0.5377 (3)0.6475 (2)0.0417 (8)
C10.5503 (5)0.1381 (3)0.9066 (3)0.0387 (9)
H70.61180.06450.89440.046*
C20.5222 (5)0.1712 (3)1.0037 (3)0.0401 (9)
H80.56340.11981.05690.048*
C30.4326 (5)0.2808 (3)1.0236 (3)0.0388 (9)
H90.41240.30361.08970.047*
C40.3738 (5)0.3557 (3)0.9418 (3)0.0313 (8)
C50.4047 (5)0.3161 (3)0.8456 (3)0.0323 (8)
H110.36390.36540.79110.039*
C60.2281 (5)0.5222 (3)1.0382 (3)0.0385 (9)
C70.1299 (5)0.6438 (3)1.0247 (3)0.0315 (8)
C80.0694 (5)0.7050 (3)1.1103 (3)0.0419 (9)
H140.08860.67151.17590.050*
C9−0.0202 (5)0.8169 (3)1.0963 (3)0.0432 (9)
H15−0.06010.86071.15190.052*
C10−0.0493 (5)0.8622 (3)0.9980 (3)0.0384 (9)
H16−0.11210.93670.98670.046*
C110.0159 (5)0.7954 (3)0.9168 (3)0.0323 (8)
C12−0.0168 (5)0.8443 (3)0.8101 (3)0.0346 (8)
C130.0691 (5)0.8157 (3)0.6251 (3)0.0324 (8)
C14−0.1022 (5)0.8551 (3)0.5975 (3)0.0397 (9)
H20−0.21650.86040.64880.048*
C15−0.0995 (6)0.8861 (3)0.4925 (3)0.0437 (10)
H21−0.21270.91150.47200.052*
C160.0711 (6)0.8796 (3)0.4179 (3)0.0424 (10)
H220.07130.90100.34710.051*
C170.2348 (5)0.8112 (3)0.5462 (3)0.0341 (8)
H230.35000.78470.56450.041*
C180.8658 (6)0.5671 (4)0.6339 (4)0.0574 (12)
H24A0.91040.59820.56200.086*
H24B0.95520.50050.65040.086*
H24C0.85260.62200.68020.086*
C190.6793 (7)0.4444 (4)0.5953 (4)0.0645 (13)
H25A0.55250.43080.61370.097*
H25B0.76300.37780.61740.097*
H25C0.71960.46290.52020.097*
C200.5254 (6)0.5959 (3)0.7025 (3)0.0470 (10)
H260.53630.65650.73220.056*
U11U22U33U12U13U23
Hg10.06800 (12)0.04056 (10)0.03301 (9)−0.01143 (8)−0.00684 (7)−0.00492 (7)
Cl10.0584 (7)0.0423 (6)0.0694 (7)−0.0179 (5)−0.0136 (6)−0.0004 (5)
Cl20.0773 (8)0.0504 (6)0.0618 (7)−0.0063 (6)−0.0364 (6)−0.0009 (5)
O10.125 (3)0.0519 (19)0.0363 (17)0.0185 (19)−0.0330 (18)−0.0114 (14)
O20.0582 (18)0.0368 (15)0.0444 (16)0.0123 (14)−0.0092 (14)−0.0039 (13)
O30.0463 (18)0.0508 (18)0.0482 (17)0.0070 (14)0.0008 (14)−0.0013 (14)
N10.0415 (18)0.0313 (16)0.0329 (16)−0.0063 (14)−0.0069 (14)−0.0047 (13)
N20.0470 (18)0.0270 (15)0.0231 (15)0.0000 (13)−0.0109 (13)0.0006 (12)
N30.0299 (15)0.0311 (16)0.0310 (16)−0.0052 (13)−0.0035 (13)−0.0043 (13)
N40.0411 (18)0.0278 (15)0.0287 (16)0.0016 (13)−0.0053 (13)−0.0002 (13)
N50.050 (2)0.0323 (16)0.0319 (17)−0.0067 (15)−0.0090 (15)−0.0024 (14)
N60.050 (2)0.0349 (17)0.0342 (17)−0.0052 (15)−0.0043 (15)−0.0021 (14)
C10.039 (2)0.0321 (19)0.040 (2)−0.0018 (16)−0.0055 (17)−0.0050 (17)
C20.044 (2)0.036 (2)0.037 (2)−0.0031 (17)−0.0159 (18)0.0055 (17)
C30.050 (2)0.036 (2)0.031 (2)−0.0041 (18)−0.0150 (18)−0.0041 (16)
C40.0338 (19)0.0305 (18)0.0276 (18)−0.0051 (15)−0.0075 (15)−0.0006 (15)
C50.042 (2)0.0294 (18)0.0243 (18)−0.0056 (16)−0.0101 (15)0.0007 (15)
C60.044 (2)0.041 (2)0.029 (2)−0.0039 (18)−0.0095 (17)−0.0072 (17)
C70.0316 (19)0.0341 (19)0.0273 (18)−0.0065 (15)−0.0045 (15)−0.0045 (15)
C80.045 (2)0.051 (2)0.029 (2)−0.0106 (19)−0.0050 (17)−0.0096 (18)
C90.048 (2)0.044 (2)0.037 (2)−0.0104 (19)0.0008 (18)−0.0206 (18)
C100.037 (2)0.034 (2)0.043 (2)−0.0042 (16)−0.0050 (17)−0.0120 (17)
C110.0293 (18)0.0325 (19)0.0319 (19)−0.0071 (15)−0.0004 (15)−0.0063 (16)
C120.033 (2)0.032 (2)0.035 (2)−0.0030 (16)−0.0058 (16)−0.0025 (16)
C130.039 (2)0.0212 (17)0.035 (2)−0.0014 (15)−0.0110 (16)−0.0010 (15)
C140.039 (2)0.0318 (19)0.048 (2)−0.0065 (17)−0.0102 (18)−0.0053 (17)
C150.051 (2)0.0291 (19)0.059 (3)−0.0043 (18)−0.030 (2)−0.0036 (19)
C160.064 (3)0.029 (2)0.040 (2)−0.0092 (19)−0.024 (2)−0.0007 (17)
C170.039 (2)0.0298 (18)0.0311 (19)−0.0017 (16)−0.0099 (16)−0.0016 (15)
C180.058 (3)0.059 (3)0.054 (3)−0.019 (2)−0.013 (2)0.005 (2)
C190.058 (3)0.053 (3)0.074 (3)−0.016 (2)0.010 (2)−0.024 (2)
C200.064 (3)0.036 (2)0.033 (2)0.003 (2)−0.012 (2)−0.0016 (17)
Hg1—N5i2.295 (3)C3—H90.9300
Hg1—N12.337 (3)C4—C51.387 (5)
Hg1—Cl12.3994 (12)C5—H110.9300
Hg1—Cl22.4249 (14)C6—C71.501 (5)
O1—C61.215 (4)C7—C81.383 (5)
O2—C121.219 (4)C8—C91.381 (5)
O3—C201.238 (5)C8—H140.9300
N1—C51.333 (4)C9—C101.381 (5)
N1—C11.348 (5)C9—H150.9300
N2—C61.349 (4)C10—C111.378 (5)
N2—C41.404 (4)C10—H160.9300
N2—H2A0.8600C11—C121.501 (5)
N3—C71.338 (4)C13—C171.379 (5)
N3—C111.343 (4)C13—C141.386 (5)
N4—C121.354 (4)C14—C151.374 (5)
N4—C131.412 (4)C14—H200.9300
N4—H4A0.8600C15—C161.377 (6)
N5—C161.332 (5)C15—H210.9300
N5—C171.340 (4)C16—H220.9300
N5—Hg1i2.295 (3)C17—H230.9300
N6—C201.320 (5)C18—H24A0.9600
N6—C191.449 (5)C18—H24B0.9600
N6—C181.451 (5)C18—H24C0.9600
C1—C21.365 (5)C19—H25A0.9600
C1—H70.9300C19—H25B0.9600
C2—C31.387 (5)C19—H25C0.9600
C2—H80.9300C20—H260.9300
C3—C41.392 (5)
N5i—Hg1—N1106.50 (11)C9—C8—H14120.7
N5i—Hg1—Cl1117.02 (8)C7—C8—H14120.7
N1—Hg1—Cl1108.03 (8)C10—C9—C8118.6 (4)
N5i—Hg1—Cl2103.20 (9)C10—C9—H15120.7
N1—Hg1—Cl299.40 (8)C8—C9—H15120.7
Cl1—Hg1—Cl2120.60 (4)C11—C10—C9119.1 (4)
C5—N1—C1119.2 (3)C11—C10—H16120.5
C5—N1—Hg1118.8 (2)C9—C10—H16120.5
C1—N1—Hg1120.8 (2)N3—C11—C10123.2 (3)
C6—N2—C4127.2 (3)N3—C11—C12117.7 (3)
C6—N2—H2A116.4C10—C11—C12119.1 (3)
C4—N2—H2A116.4O2—C12—N4124.1 (3)
C7—N3—C11117.0 (3)O2—C12—C11120.6 (3)
C12—N4—C13122.6 (3)N4—C12—C11115.3 (3)
C12—N4—H4A118.7C17—C13—C14118.5 (3)
C13—N4—H4A118.7C17—C13—N4119.7 (3)
C16—N5—C17118.8 (3)C14—C13—N4121.8 (3)
C16—N5—Hg1i122.1 (2)C15—C14—C13118.6 (4)
C17—N5—Hg1i118.7 (2)C15—C14—H20120.7
C20—N6—C19120.9 (4)C13—C14—H20120.7
C20—N6—C18121.5 (4)C14—C15—C16119.9 (4)
C19—N6—C18117.6 (3)C14—C15—H21120.1
N1—C1—C2121.1 (3)C16—C15—H21120.1
N1—C1—H7119.4N5—C16—C15121.8 (4)
C2—C1—H7119.4N5—C16—H22119.1
C1—C2—C3120.6 (3)C15—C16—H22119.1
C1—C2—H8119.7N5—C17—C13122.5 (3)
C3—C2—H8119.7N5—C17—H23118.8
C2—C3—C4118.1 (3)C13—C17—H23118.8
C2—C3—H9120.9N6—C18—H24A109.5
C4—C3—H9120.9N6—C18—H24B109.5
C5—C4—C3118.3 (3)H24A—C18—H24B109.5
C5—C4—N2117.5 (3)N6—C18—H24C109.5
C3—C4—N2124.2 (3)H24A—C18—H24C109.5
N1—C5—C4122.6 (3)H24B—C18—H24C109.5
N1—C5—H11118.7N6—C19—H25A109.5
C4—C5—H11118.7N6—C19—H25B109.5
O1—C6—N2123.9 (4)H25A—C19—H25B109.5
O1—C6—C7120.5 (3)N6—C19—H25C109.5
N2—C6—C7115.5 (3)H25A—C19—H25C109.5
N3—C7—C8123.5 (3)H25B—C19—H25C109.5
N3—C7—C6117.1 (3)O3—C20—N6126.0 (4)
C8—C7—C6119.5 (3)O3—C20—H26117.0
C9—C8—C7118.7 (4)N6—C20—H26117.0
N5i—Hg1—N1—C599.7 (3)C6—C7—C8—C9179.8 (3)
Cl1—Hg1—N1—C5−133.8 (2)C7—C8—C9—C101.4 (6)
Cl2—Hg1—N1—C5−7.2 (3)C8—C9—C10—C11−1.6 (6)
N5i—Hg1—N1—C1−92.7 (3)C7—N3—C11—C100.7 (5)
Cl1—Hg1—N1—C133.8 (3)C7—N3—C11—C12−178.3 (3)
Cl2—Hg1—N1—C1160.5 (3)C9—C10—C11—N30.6 (6)
C5—N1—C1—C20.9 (6)C9—C10—C11—C12179.6 (3)
Hg1—N1—C1—C2−166.7 (3)C13—N4—C12—O22.8 (6)
N1—C1—C2—C3−0.7 (6)C13—N4—C12—C11−177.2 (3)
C1—C2—C3—C4−0.4 (6)N3—C11—C12—O2168.8 (3)
C2—C3—C4—C51.2 (5)C10—C11—C12—O2−10.3 (5)
C2—C3—C4—N2−179.7 (3)N3—C11—C12—N4−11.2 (5)
C6—N2—C4—C5175.5 (4)C10—C11—C12—N4169.7 (3)
C6—N2—C4—C3−3.6 (6)C12—N4—C13—C17129.3 (4)
C1—N1—C5—C40.0 (5)C12—N4—C13—C14−51.0 (5)
Hg1—N1—C5—C4167.8 (3)C17—C13—C14—C151.0 (5)
C3—C4—C5—N1−1.0 (5)N4—C13—C14—C15−178.7 (3)
N2—C4—C5—N1179.8 (3)C13—C14—C15—C16−1.2 (5)
C4—N2—C6—O10.8 (7)C17—N5—C16—C151.1 (5)
C4—N2—C6—C7−179.0 (3)Hg1i—N5—C16—C15−171.3 (3)
C11—N3—C7—C8−0.9 (5)C14—C15—C16—N50.1 (6)
C11—N3—C7—C6179.1 (3)C16—N5—C17—C13−1.2 (5)
O1—C6—C7—N3−179.9 (4)Hg1i—N5—C17—C13171.4 (3)
N2—C6—C7—N30.0 (5)C14—C13—C17—N50.1 (5)
O1—C6—C7—C80.1 (6)N4—C13—C17—N5179.9 (3)
N2—C6—C7—C8−180.0 (3)C19—N6—C20—O32.2 (6)
N3—C7—C8—C9−0.1 (6)C18—N6—C20—O3179.9 (4)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O30.862.323.090 (4)149
N2—H2A···N30.862.272.692 (2)110
N4—H4A···O30.862.062.870 (4)156
N4—H4A···N30.862.332.714 (3)107
Hg1—N5i2.295 (3)
Hg1—N12.337 (3)
Hg1—Cl12.3994 (12)
Hg1—Cl22.4249 (14)
N5i—Hg1—N1106.50 (11)
N5i—Hg1—Cl1117.02 (8)
N1—Hg1—Cl1108.03 (8)
N5i—Hg1—Cl2103.20 (9)
N1—Hg1—Cl299.40 (8)
Cl1—Hg1—Cl2120.60 (4)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O30.862.323.090 (4)149
N2—H2A⋯N30.862.272.692 (2)110
N4—H4A⋯O30.862.062.870 (4)156
N4—H4A⋯N30.862.332.714 (3)107
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