| Literature DB >> 21581491 |
Abstract
The asymmetric unit of the binuclear title complex, [Hg(2)Cl(4)(C(17)H(13)N(5)O(2))(2)]·2C(3)H(7)NO, contains one-half of the centrosymmetric mol-ecule and one dimethyl-formamide solvent mol-ecule. The Hg(II) atom is four-coordinated by two N atoms from two ligands and two Cl atoms in a distorted tetra-hedral coordination geometry. Intra-molecular N-H⋯O hydrogen bonds may be effective in the stabilization of the structure. In the crystal structure, π-π contacts between pyridine rings [centroid-to-centroid distances 3.629 (3) and 3.595 (3) Å] may further stabilize the structure.Entities:
Year: 2008 PMID: 21581491 PMCID: PMC2967866 DOI: 10.1107/S1600536808040269
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Hg2Cl4(C17H13N5O2)2]·2C3H7NO | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3289 reflections | |
| θ = 2.9–26.0° | |
| µ = 7.08 mm−1 | |
| α = 79.79 (3)° | |
| β = 73.74 (3)° | Prism, colourless |
| γ = 76.21 (3)° | 0.20 × 0.18 × 0.17 mm |
| Rigaku Saturn 724 diffractometer | 4422 independent reflections |
| Radiation source: fine-focus sealed tube | 3995 reflections with |
| graphite | |
| Detector resolution: 28.5714 pixels mm-1 | θmax = 26.0°, θmin = 2.9° |
| dtprofit.ref scans | |
| Absorption correction: numerical ( | |
| 12347 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4422 reflections | (Δ/σ)max = 0.002 |
| 291 parameters | Δρmax = 0.65 e Å−3 |
| 0 restraints | Δρmin = −0.83 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Hg1 | 0.47943 (3) | 0.144664 (13) | 0.675659 (12) | 0.04821 (7) | |
| Cl1 | 0.39934 (16) | −0.03890 (9) | 0.72493 (9) | 0.0566 (3) | |
| Cl2 | 0.26095 (18) | 0.30392 (9) | 0.61184 (9) | 0.0611 (3) | |
| O1 | 0.2543 (5) | 0.4774 (3) | 1.1235 (2) | 0.0738 (10) | |
| O2 | −0.1219 (4) | 0.9357 (2) | 0.7985 (2) | 0.0511 (7) | |
| O3 | 0.3641 (4) | 0.5771 (2) | 0.7182 (2) | 0.0546 (8) | |
| N1 | 0.4906 (4) | 0.2103 (2) | 0.8281 (2) | 0.0358 (7) | |
| N2 | 0.2824 (4) | 0.4689 (2) | 0.9507 (2) | 0.0337 (7) | |
| H2A | 0.2584 | 0.5087 | 0.8941 | 0.040* | |
| N3 | 0.1061 (4) | 0.6871 (2) | 0.9285 (2) | 0.0316 (7) | |
| N4 | 0.0775 (4) | 0.7801 (2) | 0.7310 (2) | 0.0352 (7) | |
| H4A | 0.1452 | 0.7151 | 0.7459 | 0.042* | |
| N5 | 0.2361 (4) | 0.8435 (2) | 0.4443 (2) | 0.0387 (7) | |
| N6 | 0.6833 (5) | 0.5377 (3) | 0.6475 (2) | 0.0417 (8) | |
| C1 | 0.5503 (5) | 0.1381 (3) | 0.9066 (3) | 0.0387 (9) | |
| H7 | 0.6118 | 0.0645 | 0.8944 | 0.046* | |
| C2 | 0.5222 (5) | 0.1712 (3) | 1.0037 (3) | 0.0401 (9) | |
| H8 | 0.5634 | 0.1198 | 1.0569 | 0.048* | |
| C3 | 0.4326 (5) | 0.2808 (3) | 1.0236 (3) | 0.0388 (9) | |
| H9 | 0.4124 | 0.3036 | 1.0897 | 0.047* | |
| C4 | 0.3738 (5) | 0.3557 (3) | 0.9418 (3) | 0.0313 (8) | |
| C5 | 0.4047 (5) | 0.3161 (3) | 0.8456 (3) | 0.0323 (8) | |
| H11 | 0.3639 | 0.3654 | 0.7911 | 0.039* | |
| C6 | 0.2281 (5) | 0.5222 (3) | 1.0382 (3) | 0.0385 (9) | |
| C7 | 0.1299 (5) | 0.6438 (3) | 1.0247 (3) | 0.0315 (8) | |
| C8 | 0.0694 (5) | 0.7050 (3) | 1.1103 (3) | 0.0419 (9) | |
| H14 | 0.0886 | 0.6715 | 1.1759 | 0.050* | |
| C9 | −0.0202 (5) | 0.8169 (3) | 1.0963 (3) | 0.0432 (9) | |
| H15 | −0.0601 | 0.8607 | 1.1519 | 0.052* | |
| C10 | −0.0493 (5) | 0.8622 (3) | 0.9980 (3) | 0.0384 (9) | |
| H16 | −0.1121 | 0.9367 | 0.9867 | 0.046* | |
| C11 | 0.0159 (5) | 0.7954 (3) | 0.9168 (3) | 0.0323 (8) | |
| C12 | −0.0168 (5) | 0.8443 (3) | 0.8101 (3) | 0.0346 (8) | |
| C13 | 0.0691 (5) | 0.8157 (3) | 0.6251 (3) | 0.0324 (8) | |
| C14 | −0.1022 (5) | 0.8551 (3) | 0.5975 (3) | 0.0397 (9) | |
| H20 | −0.2165 | 0.8604 | 0.6488 | 0.048* | |
| C15 | −0.0995 (6) | 0.8861 (3) | 0.4925 (3) | 0.0437 (10) | |
| H21 | −0.2127 | 0.9115 | 0.4720 | 0.052* | |
| C16 | 0.0711 (6) | 0.8796 (3) | 0.4179 (3) | 0.0424 (10) | |
| H22 | 0.0713 | 0.9010 | 0.3471 | 0.051* | |
| C17 | 0.2348 (5) | 0.8112 (3) | 0.5462 (3) | 0.0341 (8) | |
| H23 | 0.3500 | 0.7847 | 0.5645 | 0.041* | |
| C18 | 0.8658 (6) | 0.5671 (4) | 0.6339 (4) | 0.0574 (12) | |
| H24A | 0.9104 | 0.5982 | 0.5620 | 0.086* | |
| H24B | 0.9552 | 0.5005 | 0.6504 | 0.086* | |
| H24C | 0.8526 | 0.6220 | 0.6802 | 0.086* | |
| C19 | 0.6793 (7) | 0.4444 (4) | 0.5953 (4) | 0.0645 (13) | |
| H25A | 0.5525 | 0.4308 | 0.6137 | 0.097* | |
| H25B | 0.7630 | 0.3778 | 0.6174 | 0.097* | |
| H25C | 0.7196 | 0.4629 | 0.5202 | 0.097* | |
| C20 | 0.5254 (6) | 0.5959 (3) | 0.7025 (3) | 0.0470 (10) | |
| H26 | 0.5363 | 0.6565 | 0.7322 | 0.056* |
| Hg1 | 0.06800 (12) | 0.04056 (10) | 0.03301 (9) | −0.01143 (8) | −0.00684 (7) | −0.00492 (7) |
| Cl1 | 0.0584 (7) | 0.0423 (6) | 0.0694 (7) | −0.0179 (5) | −0.0136 (6) | −0.0004 (5) |
| Cl2 | 0.0773 (8) | 0.0504 (6) | 0.0618 (7) | −0.0063 (6) | −0.0364 (6) | −0.0009 (5) |
| O1 | 0.125 (3) | 0.0519 (19) | 0.0363 (17) | 0.0185 (19) | −0.0330 (18) | −0.0114 (14) |
| O2 | 0.0582 (18) | 0.0368 (15) | 0.0444 (16) | 0.0123 (14) | −0.0092 (14) | −0.0039 (13) |
| O3 | 0.0463 (18) | 0.0508 (18) | 0.0482 (17) | 0.0070 (14) | 0.0008 (14) | −0.0013 (14) |
| N1 | 0.0415 (18) | 0.0313 (16) | 0.0329 (16) | −0.0063 (14) | −0.0069 (14) | −0.0047 (13) |
| N2 | 0.0470 (18) | 0.0270 (15) | 0.0231 (15) | 0.0000 (13) | −0.0109 (13) | 0.0006 (12) |
| N3 | 0.0299 (15) | 0.0311 (16) | 0.0310 (16) | −0.0052 (13) | −0.0035 (13) | −0.0043 (13) |
| N4 | 0.0411 (18) | 0.0278 (15) | 0.0287 (16) | 0.0016 (13) | −0.0053 (13) | −0.0002 (13) |
| N5 | 0.050 (2) | 0.0323 (16) | 0.0319 (17) | −0.0067 (15) | −0.0090 (15) | −0.0024 (14) |
| N6 | 0.050 (2) | 0.0349 (17) | 0.0342 (17) | −0.0052 (15) | −0.0043 (15) | −0.0021 (14) |
| C1 | 0.039 (2) | 0.0321 (19) | 0.040 (2) | −0.0018 (16) | −0.0055 (17) | −0.0050 (17) |
| C2 | 0.044 (2) | 0.036 (2) | 0.037 (2) | −0.0031 (17) | −0.0159 (18) | 0.0055 (17) |
| C3 | 0.050 (2) | 0.036 (2) | 0.031 (2) | −0.0041 (18) | −0.0150 (18) | −0.0041 (16) |
| C4 | 0.0338 (19) | 0.0305 (18) | 0.0276 (18) | −0.0051 (15) | −0.0075 (15) | −0.0006 (15) |
| C5 | 0.042 (2) | 0.0294 (18) | 0.0243 (18) | −0.0056 (16) | −0.0101 (15) | 0.0007 (15) |
| C6 | 0.044 (2) | 0.041 (2) | 0.029 (2) | −0.0039 (18) | −0.0095 (17) | −0.0072 (17) |
| C7 | 0.0316 (19) | 0.0341 (19) | 0.0273 (18) | −0.0065 (15) | −0.0045 (15) | −0.0045 (15) |
| C8 | 0.045 (2) | 0.051 (2) | 0.029 (2) | −0.0106 (19) | −0.0050 (17) | −0.0096 (18) |
| C9 | 0.048 (2) | 0.044 (2) | 0.037 (2) | −0.0104 (19) | 0.0008 (18) | −0.0206 (18) |
| C10 | 0.037 (2) | 0.034 (2) | 0.043 (2) | −0.0042 (16) | −0.0050 (17) | −0.0120 (17) |
| C11 | 0.0293 (18) | 0.0325 (19) | 0.0319 (19) | −0.0071 (15) | −0.0004 (15) | −0.0063 (16) |
| C12 | 0.033 (2) | 0.032 (2) | 0.035 (2) | −0.0030 (16) | −0.0058 (16) | −0.0025 (16) |
| C13 | 0.039 (2) | 0.0212 (17) | 0.035 (2) | −0.0014 (15) | −0.0110 (16) | −0.0010 (15) |
| C14 | 0.039 (2) | 0.0318 (19) | 0.048 (2) | −0.0065 (17) | −0.0102 (18) | −0.0053 (17) |
| C15 | 0.051 (2) | 0.0291 (19) | 0.059 (3) | −0.0043 (18) | −0.030 (2) | −0.0036 (19) |
| C16 | 0.064 (3) | 0.029 (2) | 0.040 (2) | −0.0092 (19) | −0.024 (2) | −0.0007 (17) |
| C17 | 0.039 (2) | 0.0298 (18) | 0.0311 (19) | −0.0017 (16) | −0.0099 (16) | −0.0016 (15) |
| C18 | 0.058 (3) | 0.059 (3) | 0.054 (3) | −0.019 (2) | −0.013 (2) | 0.005 (2) |
| C19 | 0.058 (3) | 0.053 (3) | 0.074 (3) | −0.016 (2) | 0.010 (2) | −0.024 (2) |
| C20 | 0.064 (3) | 0.036 (2) | 0.033 (2) | 0.003 (2) | −0.012 (2) | −0.0016 (17) |
| Hg1—N5i | 2.295 (3) | C3—H9 | 0.9300 |
| Hg1—N1 | 2.337 (3) | C4—C5 | 1.387 (5) |
| Hg1—Cl1 | 2.3994 (12) | C5—H11 | 0.9300 |
| Hg1—Cl2 | 2.4249 (14) | C6—C7 | 1.501 (5) |
| O1—C6 | 1.215 (4) | C7—C8 | 1.383 (5) |
| O2—C12 | 1.219 (4) | C8—C9 | 1.381 (5) |
| O3—C20 | 1.238 (5) | C8—H14 | 0.9300 |
| N1—C5 | 1.333 (4) | C9—C10 | 1.381 (5) |
| N1—C1 | 1.348 (5) | C9—H15 | 0.9300 |
| N2—C6 | 1.349 (4) | C10—C11 | 1.378 (5) |
| N2—C4 | 1.404 (4) | C10—H16 | 0.9300 |
| N2—H2A | 0.8600 | C11—C12 | 1.501 (5) |
| N3—C7 | 1.338 (4) | C13—C17 | 1.379 (5) |
| N3—C11 | 1.343 (4) | C13—C14 | 1.386 (5) |
| N4—C12 | 1.354 (4) | C14—C15 | 1.374 (5) |
| N4—C13 | 1.412 (4) | C14—H20 | 0.9300 |
| N4—H4A | 0.8600 | C15—C16 | 1.377 (6) |
| N5—C16 | 1.332 (5) | C15—H21 | 0.9300 |
| N5—C17 | 1.340 (4) | C16—H22 | 0.9300 |
| N5—Hg1i | 2.295 (3) | C17—H23 | 0.9300 |
| N6—C20 | 1.320 (5) | C18—H24A | 0.9600 |
| N6—C19 | 1.449 (5) | C18—H24B | 0.9600 |
| N6—C18 | 1.451 (5) | C18—H24C | 0.9600 |
| C1—C2 | 1.365 (5) | C19—H25A | 0.9600 |
| C1—H7 | 0.9300 | C19—H25B | 0.9600 |
| C2—C3 | 1.387 (5) | C19—H25C | 0.9600 |
| C2—H8 | 0.9300 | C20—H26 | 0.9300 |
| C3—C4 | 1.392 (5) | ||
| N5i—Hg1—N1 | 106.50 (11) | C9—C8—H14 | 120.7 |
| N5i—Hg1—Cl1 | 117.02 (8) | C7—C8—H14 | 120.7 |
| N1—Hg1—Cl1 | 108.03 (8) | C10—C9—C8 | 118.6 (4) |
| N5i—Hg1—Cl2 | 103.20 (9) | C10—C9—H15 | 120.7 |
| N1—Hg1—Cl2 | 99.40 (8) | C8—C9—H15 | 120.7 |
| Cl1—Hg1—Cl2 | 120.60 (4) | C11—C10—C9 | 119.1 (4) |
| C5—N1—C1 | 119.2 (3) | C11—C10—H16 | 120.5 |
| C5—N1—Hg1 | 118.8 (2) | C9—C10—H16 | 120.5 |
| C1—N1—Hg1 | 120.8 (2) | N3—C11—C10 | 123.2 (3) |
| C6—N2—C4 | 127.2 (3) | N3—C11—C12 | 117.7 (3) |
| C6—N2—H2A | 116.4 | C10—C11—C12 | 119.1 (3) |
| C4—N2—H2A | 116.4 | O2—C12—N4 | 124.1 (3) |
| C7—N3—C11 | 117.0 (3) | O2—C12—C11 | 120.6 (3) |
| C12—N4—C13 | 122.6 (3) | N4—C12—C11 | 115.3 (3) |
| C12—N4—H4A | 118.7 | C17—C13—C14 | 118.5 (3) |
| C13—N4—H4A | 118.7 | C17—C13—N4 | 119.7 (3) |
| C16—N5—C17 | 118.8 (3) | C14—C13—N4 | 121.8 (3) |
| C16—N5—Hg1i | 122.1 (2) | C15—C14—C13 | 118.6 (4) |
| C17—N5—Hg1i | 118.7 (2) | C15—C14—H20 | 120.7 |
| C20—N6—C19 | 120.9 (4) | C13—C14—H20 | 120.7 |
| C20—N6—C18 | 121.5 (4) | C14—C15—C16 | 119.9 (4) |
| C19—N6—C18 | 117.6 (3) | C14—C15—H21 | 120.1 |
| N1—C1—C2 | 121.1 (3) | C16—C15—H21 | 120.1 |
| N1—C1—H7 | 119.4 | N5—C16—C15 | 121.8 (4) |
| C2—C1—H7 | 119.4 | N5—C16—H22 | 119.1 |
| C1—C2—C3 | 120.6 (3) | C15—C16—H22 | 119.1 |
| C1—C2—H8 | 119.7 | N5—C17—C13 | 122.5 (3) |
| C3—C2—H8 | 119.7 | N5—C17—H23 | 118.8 |
| C2—C3—C4 | 118.1 (3) | C13—C17—H23 | 118.8 |
| C2—C3—H9 | 120.9 | N6—C18—H24A | 109.5 |
| C4—C3—H9 | 120.9 | N6—C18—H24B | 109.5 |
| C5—C4—C3 | 118.3 (3) | H24A—C18—H24B | 109.5 |
| C5—C4—N2 | 117.5 (3) | N6—C18—H24C | 109.5 |
| C3—C4—N2 | 124.2 (3) | H24A—C18—H24C | 109.5 |
| N1—C5—C4 | 122.6 (3) | H24B—C18—H24C | 109.5 |
| N1—C5—H11 | 118.7 | N6—C19—H25A | 109.5 |
| C4—C5—H11 | 118.7 | N6—C19—H25B | 109.5 |
| O1—C6—N2 | 123.9 (4) | H25A—C19—H25B | 109.5 |
| O1—C6—C7 | 120.5 (3) | N6—C19—H25C | 109.5 |
| N2—C6—C7 | 115.5 (3) | H25A—C19—H25C | 109.5 |
| N3—C7—C8 | 123.5 (3) | H25B—C19—H25C | 109.5 |
| N3—C7—C6 | 117.1 (3) | O3—C20—N6 | 126.0 (4) |
| C8—C7—C6 | 119.5 (3) | O3—C20—H26 | 117.0 |
| C9—C8—C7 | 118.7 (4) | N6—C20—H26 | 117.0 |
| N5i—Hg1—N1—C5 | 99.7 (3) | C6—C7—C8—C9 | 179.8 (3) |
| Cl1—Hg1—N1—C5 | −133.8 (2) | C7—C8—C9—C10 | 1.4 (6) |
| Cl2—Hg1—N1—C5 | −7.2 (3) | C8—C9—C10—C11 | −1.6 (6) |
| N5i—Hg1—N1—C1 | −92.7 (3) | C7—N3—C11—C10 | 0.7 (5) |
| Cl1—Hg1—N1—C1 | 33.8 (3) | C7—N3—C11—C12 | −178.3 (3) |
| Cl2—Hg1—N1—C1 | 160.5 (3) | C9—C10—C11—N3 | 0.6 (6) |
| C5—N1—C1—C2 | 0.9 (6) | C9—C10—C11—C12 | 179.6 (3) |
| Hg1—N1—C1—C2 | −166.7 (3) | C13—N4—C12—O2 | 2.8 (6) |
| N1—C1—C2—C3 | −0.7 (6) | C13—N4—C12—C11 | −177.2 (3) |
| C1—C2—C3—C4 | −0.4 (6) | N3—C11—C12—O2 | 168.8 (3) |
| C2—C3—C4—C5 | 1.2 (5) | C10—C11—C12—O2 | −10.3 (5) |
| C2—C3—C4—N2 | −179.7 (3) | N3—C11—C12—N4 | −11.2 (5) |
| C6—N2—C4—C5 | 175.5 (4) | C10—C11—C12—N4 | 169.7 (3) |
| C6—N2—C4—C3 | −3.6 (6) | C12—N4—C13—C17 | 129.3 (4) |
| C1—N1—C5—C4 | 0.0 (5) | C12—N4—C13—C14 | −51.0 (5) |
| Hg1—N1—C5—C4 | 167.8 (3) | C17—C13—C14—C15 | 1.0 (5) |
| C3—C4—C5—N1 | −1.0 (5) | N4—C13—C14—C15 | −178.7 (3) |
| N2—C4—C5—N1 | 179.8 (3) | C13—C14—C15—C16 | −1.2 (5) |
| C4—N2—C6—O1 | 0.8 (7) | C17—N5—C16—C15 | 1.1 (5) |
| C4—N2—C6—C7 | −179.0 (3) | Hg1i—N5—C16—C15 | −171.3 (3) |
| C11—N3—C7—C8 | −0.9 (5) | C14—C15—C16—N5 | 0.1 (6) |
| C11—N3—C7—C6 | 179.1 (3) | C16—N5—C17—C13 | −1.2 (5) |
| O1—C6—C7—N3 | −179.9 (4) | Hg1i—N5—C17—C13 | 171.4 (3) |
| N2—C6—C7—N3 | 0.0 (5) | C14—C13—C17—N5 | 0.1 (5) |
| O1—C6—C7—C8 | 0.1 (6) | N4—C13—C17—N5 | 179.9 (3) |
| N2—C6—C7—C8 | −180.0 (3) | C19—N6—C20—O3 | 2.2 (6) |
| N3—C7—C8—C9 | −0.1 (6) | C18—N6—C20—O3 | 179.9 (4) |
| H··· | ||||
| N2—H2A···O3 | 0.86 | 2.32 | 3.090 (4) | 149 |
| N2—H2A···N3 | 0.86 | 2.27 | 2.692 (2) | 110 |
| N4—H4A···O3 | 0.86 | 2.06 | 2.870 (4) | 156 |
| N4—H4A···N3 | 0.86 | 2.33 | 2.714 (3) | 107 |
| Hg1—N5i | 2.295 (3) |
| Hg1—N1 | 2.337 (3) |
| Hg1—Cl1 | 2.3994 (12) |
| Hg1—Cl2 | 2.4249 (14) |
| N5i—Hg1—N1 | 106.50 (11) |
| N5i—Hg1—Cl1 | 117.02 (8) |
| N1—Hg1—Cl1 | 108.03 (8) |
| N5i—Hg1—Cl2 | 103.20 (9) |
| N1—Hg1—Cl2 | 99.40 (8) |
| Cl1—Hg1—Cl2 | 120.60 (4) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.86 | 2.32 | 3.090 (4) | 149 |
| N2—H2 | 0.86 | 2.27 | 2.692 (2) | 110 |
| N4—H4 | 0.86 | 2.06 | 2.870 (4) | 156 |
| N4—H4 | 0.86 | 2.33 | 2.714 (3) | 107 |