| Literature DB >> 21581422 |
Xianqiang Huang, Feng Xin, Qiu-Lan Shi, Yong Wang, Guo-Dong Wei.
Abstract
In the title mol-ecule, C(21)H(16)Cl(2)O(2)S, the five-membered ring is rotationally disordered between two orientations in a 1:1 ratio. In the crystal structure, weak inter-molecular C-H⋯O hydrogen bonds link mol-ecules related by translation along the a axis into chains, which are further combined into layers parallel to the bc plane via C-H⋯π inter-actions. The crystal studied was a racemic twin with a 0.37 (19):0.63 (19) domain ratio.Entities:
Year: 2008 PMID: 21581422 PMCID: PMC2959928 DOI: 10.1107/S1600536808038993
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H16Cl2O2S | |
| Mo | |
| Orthorhombic, | Cell parameters from 1035 reflections |
| θ = 2.9–18.1º | |
| µ = 0.45 mm−1 | |
| Block, colourless | |
| 0.50 × 0.18 × 0.15 mm | |
| Bruker SMART CCD area-detector diffractometer | 3430 independent reflections |
| Radiation source: fine-focus sealed tube | 1466 reflections with |
| Monochromator: graphite | |
| θmax = 25.0º | |
| φ and ω scans | θmin = 1.8º |
| Absorption correction: multi-scan(SADABS; Sheldrick, 1996) | |
| 9549 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| | |
| (Δ/σ)max = 0.049 | |
| Δρmax = 0.22 e Å−3 | |
| 3430 reflections | Δρmin = −0.24 e Å−3 |
| 274 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 93 restraints | Extinction coefficient: 0.007 (3) |
| Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983); 1650 Friedel pairs |
| Secondary atom site location: difference Fourier map | Flack parameter: 0.37 (19) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Cl1 | 0.2204 (5) | 0.35740 (19) | 0.37574 (14) | 0.0939 (10) | |
| Cl2 | −0.1208 (5) | 0.1215 (2) | 1.10502 (16) | 0.1172 (13) | |
| O1 | 0.4870 (9) | 0.2902 (4) | 0.7007 (3) | 0.077 (2) | |
| O2 | 0.5943 (10) | 0.1389 (5) | 0.8854 (4) | 0.092 (2) | |
| S1' | 0.4882 (12) | −0.0928 (5) | 0.7244 (4) | 0.081 (3) | 0.501 (11) |
| C1' | 0.670 (3) | −0.1622 (13) | 0.7454 (11) | 0.072 (6) | 0.501 (11) |
| H1' | 0.6698 | −0.2277 | 0.7403 | 0.086* | 0.501 (11) |
| C2' | 0.818 (3) | −0.1125 (15) | 0.7705 (12) | 0.089 (6) | 0.501 (11) |
| H2' | 0.9278 | −0.1396 | 0.7869 | 0.106* | 0.501 (11) |
| C3' | 0.782 (3) | −0.0134 (17) | 0.7684 (14) | 0.088 (7) | 0.501 (11) |
| H3' | 0.8728 | 0.0324 | 0.7770 | 0.106* | 0.501 (11) |
| S1 | 0.7978 (12) | −0.0198 (6) | 0.7932 (5) | 0.107 (3) | 0.499 (11) |
| C1 | 0.772 (3) | −0.1384 (11) | 0.7777 (13) | 0.085 (6) | 0.499 (11) |
| H1 | 0.8553 | −0.1848 | 0.7920 | 0.102* | 0.499 (11) |
| C2 | 0.609 (4) | −0.1556 (14) | 0.7408 (15) | 0.096 (7) | 0.499 (11) |
| H2 | 0.5705 | −0.2157 | 0.7273 | 0.116* | 0.499 (11) |
| C3 | 0.510 (4) | −0.0733 (15) | 0.7263 (16) | 0.097 (7) | 0.499 (11) |
| H3 | 0.3984 | −0.0724 | 0.7018 | 0.116* | 0.499 (11) |
| C4 | 0.5961 (12) | 0.0071 (5) | 0.7518 (4) | 0.059 (2) | |
| C5 | 0.5207 (13) | 0.1047 (6) | 0.7477 (4) | 0.058 (2) | |
| H5 | 0.6228 | 0.1486 | 0.7585 | 0.070* | |
| C6 | 0.4526 (13) | 0.1269 (6) | 0.6752 (4) | 0.060 (2) | |
| H6A | 0.5338 | 0.0954 | 0.6424 | 0.072* | |
| H6B | 0.3279 | 0.1009 | 0.6696 | 0.072* | |
| C7 | 0.4467 (13) | 0.2307 (6) | 0.6581 (5) | 0.058 (2) | |
| C8 | 0.3898 (11) | 0.2589 (6) | 0.5866 (4) | 0.053 (2) | |
| C9 | 0.3827 (13) | 0.3539 (6) | 0.5708 (4) | 0.062 (2) | |
| H9 | 0.4142 | 0.3983 | 0.6043 | 0.074* | |
| C10 | 0.3292 (14) | 0.3844 (7) | 0.5056 (5) | 0.073 (3) | |
| H10 | 0.3216 | 0.4486 | 0.4957 | 0.088* | |
| C11 | 0.2880 (14) | 0.3186 (7) | 0.4564 (4) | 0.067 (2) | |
| C12 | 0.2986 (13) | 0.2235 (6) | 0.4700 (5) | 0.063 (2) | |
| H12 | 0.2735 | 0.1796 | 0.4354 | 0.076* | |
| C13 | 0.3468 (12) | 0.1938 (6) | 0.5352 (5) | 0.062 (2) | |
| H13 | 0.3506 | 0.1294 | 0.5451 | 0.074* | |
| C14 | 0.3630 (13) | 0.1219 (6) | 0.7999 (4) | 0.060 (2) | |
| H14A | 0.2971 | 0.1793 | 0.7872 | 0.072* | |
| H14B | 0.2748 | 0.0699 | 0.7972 | 0.072* | |
| C15 | 0.4286 (14) | 0.1311 (6) | 0.8727 (5) | 0.064 (2) | |
| C16 | 0.2903 (16) | 0.1309 (5) | 0.9295 (4) | 0.057 (2) | |
| C17 | 0.1016 (14) | 0.1270 (6) | 0.9166 (5) | 0.061 (2) | |
| H17 | 0.0591 | 0.1252 | 0.8713 | 0.073* | |
| C18 | −0.0272 (14) | 0.1257 (7) | 0.9706 (5) | 0.077 (3) | |
| H18 | −0.1550 | 0.1233 | 0.9616 | 0.092* | |
| C19 | 0.0376 (16) | 0.1278 (6) | 1.0372 (5) | 0.071 (3) | |
| C20 | 0.2218 (17) | 0.1315 (7) | 1.0516 (5) | 0.080 (3) | |
| H20 | 0.2633 | 0.1324 | 1.0971 | 0.096* | |
| C21 | 0.3488 (14) | 0.1341 (7) | 0.9974 (4) | 0.071 (3) | |
| H21 | 0.4760 | 0.1379 | 1.0070 | 0.085* |
| Cl1 | 0.119 (2) | 0.0946 (19) | 0.0679 (17) | 0.0109 (16) | −0.0102 (16) | 0.0201 (14) |
| Cl2 | 0.114 (3) | 0.163 (3) | 0.075 (2) | 0.021 (2) | 0.0267 (17) | −0.0001 (17) |
| O1 | 0.106 (6) | 0.060 (4) | 0.063 (4) | −0.004 (4) | −0.015 (4) | −0.002 (3) |
| O2 | 0.063 (5) | 0.147 (6) | 0.067 (5) | −0.005 (4) | −0.010 (4) | −0.016 (4) |
| S1' | 0.099 (6) | 0.075 (5) | 0.070 (4) | −0.012 (4) | 0.003 (4) | 0.007 (3) |
| C1' | 0.091 (12) | 0.063 (10) | 0.062 (10) | 0.013 (9) | 0.010 (10) | 0.018 (8) |
| C2' | 0.106 (13) | 0.077 (11) | 0.083 (11) | −0.001 (10) | −0.002 (10) | 0.011 (10) |
| C3' | 0.101 (13) | 0.081 (12) | 0.083 (11) | 0.012 (11) | −0.013 (11) | 0.009 (10) |
| S1 | 0.092 (5) | 0.084 (5) | 0.146 (8) | 0.026 (3) | −0.034 (5) | −0.004 (4) |
| C1 | 0.086 (12) | 0.048 (10) | 0.122 (13) | 0.014 (10) | 0.005 (11) | 0.013 (9) |
| C2 | 0.099 (12) | 0.072 (11) | 0.118 (13) | 0.019 (11) | −0.001 (11) | 0.016 (10) |
| C3 | 0.093 (13) | 0.063 (12) | 0.135 (14) | 0.018 (11) | −0.003 (12) | 0.013 (11) |
| C4 | 0.056 (6) | 0.067 (6) | 0.054 (5) | 0.000 (5) | −0.006 (4) | 0.010 (4) |
| C5 | 0.051 (6) | 0.061 (5) | 0.063 (6) | 0.000 (4) | −0.004 (4) | 0.003 (4) |
| C6 | 0.057 (6) | 0.064 (6) | 0.058 (6) | −0.002 (4) | 0.005 (4) | 0.011 (4) |
| C7 | 0.054 (6) | 0.067 (6) | 0.055 (5) | 0.009 (5) | 0.003 (4) | 0.016 (5) |
| C8 | 0.044 (5) | 0.060 (6) | 0.056 (5) | 0.006 (4) | 0.000 (4) | 0.010 (5) |
| C9 | 0.065 (6) | 0.059 (6) | 0.062 (6) | 0.000 (5) | −0.016 (5) | −0.001 (4) |
| C10 | 0.081 (8) | 0.069 (6) | 0.070 (7) | 0.004 (5) | −0.009 (6) | 0.016 (5) |
| C11 | 0.076 (7) | 0.069 (6) | 0.057 (6) | −0.002 (5) | −0.001 (5) | 0.015 (5) |
| C12 | 0.057 (6) | 0.071 (6) | 0.062 (6) | 0.001 (5) | 0.004 (4) | 0.005 (5) |
| C13 | 0.061 (7) | 0.061 (6) | 0.064 (6) | 0.010 (4) | 0.004 (4) | 0.006 (5) |
| C14 | 0.060 (6) | 0.070 (6) | 0.051 (5) | 0.001 (4) | −0.008 (4) | 0.004 (4) |
| C15 | 0.059 (6) | 0.082 (6) | 0.050 (5) | 0.003 (5) | −0.009 (5) | −0.005 (4) |
| C16 | 0.074 (7) | 0.049 (5) | 0.047 (5) | 0.002 (5) | −0.007 (5) | −0.007 (4) |
| C17 | 0.068 (7) | 0.067 (6) | 0.048 (5) | 0.013 (5) | −0.003 (5) | 0.002 (4) |
| C18 | 0.056 (7) | 0.106 (8) | 0.068 (7) | 0.009 (5) | −0.004 (6) | 0.002 (5) |
| C19 | 0.092 (9) | 0.064 (6) | 0.058 (6) | 0.001 (5) | 0.005 (6) | −0.015 (4) |
| C20 | 0.090 (9) | 0.106 (8) | 0.044 (5) | −0.015 (6) | −0.009 (6) | 0.003 (5) |
| C21 | 0.070 (7) | 0.090 (7) | 0.053 (6) | −0.007 (5) | −0.013 (5) | −0.009 (4) |
| Cl1—C11 | 1.724 (9) | C6—H6B | 0.9700 |
| Cl2—C19 | 1.736 (11) | C7—C8 | 1.498 (11) |
| O1—C7 | 1.213 (10) | C8—C9 | 1.377 (10) |
| O2—C15 | 1.215 (10) | C8—C13 | 1.389 (11) |
| S1'—C1' | 1.678 (16) | C9—C10 | 1.387 (12) |
| S1'—C4 | 1.694 (10) | C9—H9 | 0.9300 |
| C1'—C2' | 1.359 (17) | C10—C11 | 1.364 (13) |
| C1'—H1' | 0.9300 | C10—H10 | 0.9300 |
| C2'—C3' | 1.423 (18) | C11—C12 | 1.371 (12) |
| C2'—H2' | 0.9300 | C12—C13 | 1.376 (12) |
| C3'—C4 | 1.401 (18) | C12—H12 | 0.9300 |
| C3'—H3' | 0.9300 | C13—H13 | 0.9300 |
| S1—C4 | 1.693 (10) | C14—C15 | 1.490 (12) |
| S1—C1 | 1.713 (16) | C14—H14A | 0.9700 |
| C1—C2 | 1.385 (18) | C14—H14B | 0.9700 |
| C1—H1 | 0.9300 | C15—C16 | 1.479 (13) |
| C2—C3 | 1.390 (18) | C16—C17 | 1.373 (12) |
| C2—H2 | 0.9300 | C16—C21 | 1.381 (12) |
| C3—C4 | 1.383 (19) | C17—C18 | 1.393 (13) |
| C3—H3 | 0.9300 | C17—H17 | 0.9300 |
| C4—C5 | 1.482 (10) | C18—C19 | 1.372 (14) |
| C5—C6 | 1.518 (11) | C18—H18 | 0.9300 |
| C5—C14 | 1.535 (13) | C19—C20 | 1.347 (14) |
| C5—H5 | 0.9800 | C20—C21 | 1.389 (14) |
| C6—C7 | 1.504 (10) | C20—H20 | 0.9300 |
| C6—H6A | 0.9700 | C21—H21 | 0.9300 |
| C1'—S1'—C4 | 93.3 (9) | C9—C8—C13 | 118.6 (7) |
| C2'—C1'—S1' | 112.8 (13) | C9—C8—C7 | 118.3 (7) |
| C2'—C1'—H1' | 123.6 | C13—C8—C7 | 123.1 (7) |
| S1'—C1'—H1' | 123.6 | C8—C9—C10 | 120.9 (8) |
| C1'—C2'—C3' | 111.1 (17) | C8—C9—H9 | 119.5 |
| C1'—C2'—H2' | 124.5 | C10—C9—H9 | 119.5 |
| C3'—C2'—H2' | 124.4 | C11—C10—C9 | 119.0 (9) |
| C4—C3'—C2' | 112.3 (17) | C11—C10—H10 | 120.5 |
| C4—C3'—H3' | 123.8 | C9—C10—H10 | 120.5 |
| C2'—C3'—H3' | 123.8 | C10—C11—C12 | 121.4 (8) |
| C4—S1—C1 | 92.5 (9) | C10—C11—Cl1 | 118.6 (7) |
| C2—C1—S1 | 110.7 (13) | C12—C11—Cl1 | 120.1 (7) |
| C2—C1—H1 | 124.6 | C11—C12—C13 | 119.3 (9) |
| S1—C1—H1 | 124.6 | C11—C12—H12 | 120.4 |
| C1—C2—C3 | 112.6 (17) | C13—C12—H12 | 120.4 |
| C1—C2—H2 | 123.7 | C12—C13—C8 | 120.7 (8) |
| C3—C2—H2 | 123.7 | C12—C13—H13 | 119.6 |
| C4—C3—C2 | 112.9 (18) | C8—C13—H13 | 119.6 |
| C4—C3—H3 | 123.5 | C15—C14—C5 | 114.0 (8) |
| C2—C3—H3 | 123.5 | C15—C14—H14A | 108.8 |
| C3—C4—C3' | 109.4 (15) | C5—C14—H14A | 108.8 |
| C3—C4—C5 | 125.7 (13) | C15—C14—H14B | 108.8 |
| C3'—C4—C5 | 123.5 (12) | C5—C14—H14B | 108.8 |
| C3—C4—S1 | 111.3 (12) | H14A—C14—H14B | 107.7 |
| C3'—C4—S1 | 15.2 (13) | O2—C15—C16 | 120.0 (9) |
| C5—C4—S1 | 123.0 (7) | O2—C15—C14 | 120.4 (9) |
| C3—C4—S1' | 2.8 (15) | C16—C15—C14 | 119.6 (9) |
| C3'—C4—S1' | 109.4 (11) | C17—C16—C21 | 118.1 (9) |
| C5—C4—S1' | 126.3 (7) | C17—C16—C15 | 121.4 (8) |
| S1—C4—S1' | 110.4 (6) | C21—C16—C15 | 120.4 (9) |
| C4—C5—C6 | 111.1 (7) | C16—C17—C18 | 120.9 (8) |
| C4—C5—C14 | 112.3 (7) | C16—C17—H17 | 119.5 |
| C6—C5—C14 | 109.9 (7) | C18—C17—H17 | 119.5 |
| C4—C5—H5 | 107.8 | C19—C18—C17 | 118.9 (9) |
| C6—C5—H5 | 107.8 | C19—C18—H18 | 120.6 |
| C14—C5—H5 | 107.8 | C17—C18—H18 | 120.6 |
| C7—C6—C5 | 114.5 (7) | C20—C19—C18 | 121.7 (10) |
| C7—C6—H6A | 108.6 | C20—C19—Cl2 | 118.9 (8) |
| C5—C6—H6A | 108.6 | C18—C19—Cl2 | 119.4 (9) |
| C7—C6—H6B | 108.6 | C19—C20—C21 | 118.9 (9) |
| C5—C6—H6B | 108.6 | C19—C20—H20 | 120.6 |
| H6A—C6—H6B | 107.6 | C21—C20—H20 | 120.6 |
| O1—C7—C8 | 120.7 (8) | C16—C21—C20 | 121.5 (10) |
| O1—C7—C6 | 121.2 (8) | C16—C21—H21 | 119.3 |
| C8—C7—C6 | 118.1 (8) | C20—C21—H21 | 119.3 |
| C4—S1'—C1'—C2' | −2.6 (7) | C5—C6—C7—C8 | 177.1 (8) |
| S1'—C1'—C2'—C3' | −3.5 (9) | O1—C7—C8—C9 | −0.6 (13) |
| C1'—C2'—C3'—C4 | 9.7 (17) | C6—C7—C8—C9 | 179.5 (8) |
| C4—S1—C1—C2 | 0.2 (7) | O1—C7—C8—C13 | 178.3 (9) |
| S1—C1—C2—C3 | −0.1 (10) | C6—C7—C8—C13 | −1.5 (12) |
| C1—C2—C3—C4 | −0.1 (19) | C13—C8—C9—C10 | 1.6 (14) |
| C2—C3—C4—C3' | 16 (3) | C7—C8—C9—C10 | −179.4 (9) |
| C2—C3—C4—C5 | −176.9 (13) | C8—C9—C10—C11 | −1.7 (16) |
| C2—C3—C4—S1 | 0(2) | C9—C10—C11—C12 | 0.0 (16) |
| C2—C3—C4—S1' | −73 (26) | C9—C10—C11—Cl1 | 179.6 (8) |
| C2'—C3'—C4—C3 | −14 (2) | C10—C11—C12—C13 | 1.8 (14) |
| C2'—C3'—C4—C5 | 178.6 (12) | Cl1—C11—C12—C13 | −177.8 (8) |
| C2'—C3'—C4—S1 | 85 (5) | C11—C12—C13—C8 | −1.9 (14) |
| C2'—C3'—C4—S1' | −11.3 (19) | C9—C8—C13—C12 | 0.2 (13) |
| C1—S1—C4—C3 | −0.3 (15) | C7—C8—C13—C12 | −178.8 (9) |
| C1—S1—C4—C3' | −86 (4) | C4—C5—C14—C15 | 73.6 (9) |
| C1—S1—C4—C5 | 176.9 (11) | C6—C5—C14—C15 | −162.3 (7) |
| C1—S1—C4—S1' | 2.5 (10) | C5—C14—C15—O2 | 11.0 (12) |
| C1'—S1'—C4—C3 | 100 (27) | C5—C14—C15—C16 | −169.3 (7) |
| C1'—S1'—C4—C3' | 7.9 (13) | O2—C15—C16—C17 | 176.7 (8) |
| C1'—S1'—C4—C5 | 177.6 (10) | C14—C15—C16—C17 | −3.1 (12) |
| C1'—S1'—C4—S1 | −8.2 (9) | O2—C15—C16—C21 | −3.8 (13) |
| C3—C4—C5—C6 | −47.4 (19) | C14—C15—C16—C21 | 176.4 (8) |
| C3'—C4—C5—C6 | 117.6 (16) | C21—C16—C17—C18 | −0.4 (12) |
| S1—C4—C5—C6 | 135.8 (8) | C15—C16—C17—C18 | 179.1 (8) |
| S1'—C4—C5—C6 | −50.7 (11) | C16—C17—C18—C19 | −0.3 (13) |
| C3—C4—C5—C14 | 76.2 (18) | C17—C18—C19—C20 | 0.2 (14) |
| C3'—C4—C5—C14 | −118.8 (15) | C17—C18—C19—Cl2 | −177.5 (7) |
| S1—C4—C5—C14 | −100.6 (9) | C18—C19—C20—C21 | 0.6 (14) |
| S1'—C4—C5—C14 | 72.9 (10) | Cl2—C19—C20—C21 | 178.3 (7) |
| C4—C5—C6—C7 | −156.7 (8) | C17—C16—C21—C20 | 1.2 (13) |
| C14—C5—C6—C7 | 78.5 (10) | C15—C16—C21—C20 | −178.3 (8) |
| C5—C6—C7—O1 | −2.7 (13) | C19—C20—C21—C16 | −1.3 (14) |
| H··· | ||||
| C18—H18···O2i | 0.93 | 2.33 | 3.175 (12) | 150 |
| C10—H10···Cgii | 0.93 | 2.57 | 3.489 (10) | 171 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C18—H18⋯O2i | 0.93 | 2.33 | 3.175 (12) | 150 |
| C10—H10⋯ | 0.93 | 2.57 | 3.489 (10) | 171 |
Symmetry codes: (i) ; (ii) . Cg is the centroid of the C16–C21 ring.