Literature DB >> 21581326

Ethyl 1-(6-chloro-3-pyridylmeth-yl)-5-ethoxy-methyl-eneamino-1H-1,2,3-triazole-4-carboxyl-ate.

Xiao-Bao Chen, Feng-Mei Sun, Hai-Tao Gao, Jing Xu, Ai-Hua Zheng.   

Abstract

In the title compound, C(14)H(16)ClN(5)O(3), there is evidence for significant electron delocalization in the triazolyl system. Intra-molecular C-H⋯O and inter-molecular C-H⋯O and C-H⋯N hydrogen bonds stabilize the structure.

Entities:  

Year:  2008        PMID: 21581326      PMCID: PMC2959854          DOI: 10.1107/S1600536808037197

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Many derivatives of triazole have been prepared, and their biological activities have been studied, see: Ogura et al. (2000a ▶,b ▶); Najim et al. (2004 ▶); Banks & Chubb (1999a ▶,b ▶); Shuto et al. (1995a ▶,b ▶); Yuan et al. (2006 ▶); Chen et al. (2005 ▶); Liu et al. (2001 ▶). For the synthesis, see: Chen & Shi (2008 ▶). For bond-length data, see: Sasada (1984 ▶); Wang et al. (1998 ▶).

Experimental

Crystal data

C14H16ClN5O3 M = 337.77 Monoclinic, a = 16.8823 (17) Å b = 6.3134 (6) Å c = 15.3065 (15) Å β = 90.980 (1)° V = 1631.2 (3) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 291 (2) K 0.50 × 0.47 × 0.36 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: none 10092 measured reflections 2980 independent reflections 2551 reflections with I > 2σ(I) R int = 0.014

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.098 S = 1.04 2980 reflections 210 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.40 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808037197/at2675sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808037197/at2675Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H16ClN5O3F000 = 704
Mr = 337.77Dx = 1.375 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4752 reflections
a = 16.8823 (17) Åθ = 2.7–27.8º
b = 6.3134 (6) ŵ = 0.26 mm1
c = 15.3065 (15) ÅT = 291 (2) K
β = 90.9800 (10)ºBlock, colourless
V = 1631.2 (3) Å30.50 × 0.47 × 0.36 mm
Z = 4
Bruker SMART APEX CCD area-detector diffractometer2551 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.014
Monochromator: graphiteθmax = 25.5º
T = 291(2) Kθmin = 2.7º
φ and ω scansh = −20→20
Absorption correction: nonek = −7→7
10092 measured reflectionsl = −18→18
2980 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.036H-atom parameters constrained
wR(F2) = 0.098  w = 1/[σ2(Fo2) + (0.0449P)2 + 0.5005P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
2980 reflectionsΔρmax = 0.25 e Å3
210 parametersΔρmin = −0.40 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR andgoodness of fit S are based on F2, conventional R-factors R are basedon F, with F set to zero for negative F2. The threshold expression ofF2 > σ(F2) is used only for calculating R-factors(gt) etc. and isnot relevant to the choice of reflections for refinement. R-factors basedon F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.36873 (3)0.34616 (9)0.06142 (3)0.07336 (19)
O10.89923 (7)0.8586 (2)−0.04595 (8)0.0571 (3)
O20.91635 (9)0.6353 (3)0.06636 (11)0.0821 (5)
O30.80412 (9)0.27638 (19)0.22225 (8)0.0633 (4)
N10.50169 (9)0.4258 (2)0.14254 (10)0.0559 (4)
N20.69532 (8)0.9067 (2)0.13235 (8)0.0440 (3)
N30.69871 (8)1.0541 (2)0.06795 (9)0.0499 (3)
N40.76295 (8)1.0162 (2)0.02373 (9)0.0494 (3)
N50.76407 (8)0.6142 (2)0.19200 (8)0.0470 (3)
C10.44375 (10)0.5167 (3)0.09780 (10)0.0480 (4)
C20.43841 (11)0.7289 (3)0.07976 (12)0.0582 (5)
H20.39590.78420.04770.070*
C30.49856 (10)0.8571 (3)0.11104 (12)0.0545 (4)
H30.49721.00210.10040.065*
C40.56076 (9)0.7699 (3)0.15809 (10)0.0422 (4)
C50.55899 (10)0.5546 (3)0.17194 (12)0.0535 (4)
H50.60060.49460.20400.064*
C60.62874 (10)0.9037 (3)0.19223 (11)0.0504 (4)
H6A0.61031.04750.20120.061*
H6B0.64660.84850.24830.061*
C70.80079 (9)0.8443 (2)0.05900 (10)0.0443 (4)
C80.87732 (10)0.7667 (3)0.02805 (12)0.0515 (4)
C90.97474 (11)0.7873 (3)−0.08109 (14)0.0676 (5)
H9A0.97440.6348−0.08850.081*
H9B1.01790.8246−0.04140.081*
C100.98505 (15)0.8939 (5)−0.16692 (17)0.0994 (9)
H10A0.94330.8509−0.20650.149*
H10B1.03530.8547−0.19050.149*
H10C0.98321.0446−0.15910.149*
C110.75714 (9)0.7719 (2)0.12926 (10)0.0424 (4)
C120.79167 (12)0.4373 (3)0.16850 (11)0.0580 (5)
H120.80390.41940.11000.070*
C130.78506 (12)0.3050 (3)0.31347 (11)0.0584 (5)
H13A0.72810.31090.32050.070*
H13B0.80800.43560.33570.070*
C140.81906 (16)0.1190 (4)0.36122 (14)0.0812 (7)
H14A0.7993−0.00940.33530.122*
H14B0.80400.12480.42140.122*
H14C0.87580.12190.35780.122*
U11U22U33U12U13U23
Cl10.0601 (3)0.0926 (4)0.0674 (3)−0.0200 (3)0.0024 (2)−0.0204 (3)
O10.0478 (7)0.0593 (7)0.0647 (7)0.0024 (5)0.0108 (6)0.0029 (6)
O20.0658 (9)0.0824 (10)0.0985 (11)0.0239 (8)0.0096 (8)0.0267 (9)
O30.0954 (10)0.0428 (7)0.0519 (7)0.0049 (6)0.0048 (7)0.0053 (5)
N10.0510 (8)0.0480 (8)0.0687 (9)−0.0032 (7)−0.0003 (7)0.0059 (7)
N20.0445 (7)0.0411 (7)0.0464 (7)−0.0041 (6)−0.0016 (6)0.0019 (6)
N30.0495 (8)0.0455 (8)0.0546 (8)−0.0002 (6)−0.0009 (6)0.0080 (6)
N40.0477 (8)0.0475 (8)0.0529 (8)−0.0023 (6)−0.0001 (6)0.0067 (6)
N50.0504 (8)0.0442 (8)0.0461 (7)−0.0011 (6)−0.0046 (6)0.0045 (6)
C10.0440 (9)0.0595 (10)0.0409 (8)−0.0040 (7)0.0085 (7)−0.0054 (7)
C20.0475 (10)0.0673 (12)0.0596 (10)0.0089 (8)−0.0050 (8)0.0090 (9)
C30.0537 (10)0.0448 (9)0.0652 (11)0.0078 (8)0.0022 (8)0.0091 (8)
C40.0437 (8)0.0440 (8)0.0391 (8)0.0033 (7)0.0078 (6)0.0001 (7)
C50.0482 (9)0.0501 (10)0.0620 (10)0.0016 (8)−0.0058 (8)0.0132 (8)
C60.0540 (10)0.0485 (9)0.0490 (9)−0.0009 (8)0.0061 (7)−0.0045 (7)
C70.0437 (9)0.0413 (8)0.0476 (9)−0.0043 (7)−0.0045 (7)0.0016 (7)
C80.0461 (9)0.0477 (9)0.0607 (10)−0.0032 (7)−0.0022 (8)0.0003 (8)
C90.0483 (10)0.0690 (12)0.0859 (14)0.0012 (9)0.0135 (10)−0.0138 (11)
C100.0811 (16)0.127 (2)0.0917 (17)0.0149 (16)0.0392 (14)0.0044 (16)
C110.0437 (8)0.0391 (8)0.0441 (8)−0.0044 (7)−0.0070 (7)−0.0013 (7)
C120.0857 (13)0.0450 (10)0.0434 (9)−0.0065 (9)0.0000 (9)0.0018 (8)
C130.0672 (12)0.0585 (11)0.0494 (9)0.0055 (9)0.0033 (8)0.0074 (8)
C140.1104 (18)0.0668 (13)0.0665 (13)0.0154 (12)0.0013 (12)0.0190 (11)
Cl1—C11.7462 (17)C4—C51.376 (2)
O1—C81.331 (2)C4—C61.511 (2)
O1—C91.463 (2)C5—H50.9300
O2—C81.205 (2)C6—H6A0.9700
O3—C121.322 (2)C6—H6B0.9700
O3—C131.450 (2)C7—C111.391 (2)
N1—C11.316 (2)C7—C81.468 (2)
N1—C51.336 (2)C9—C101.489 (3)
N2—C111.348 (2)C9—H9A0.9700
N2—N31.3579 (18)C9—H9B0.9700
N2—C61.463 (2)C10—H10A0.9600
N3—N41.3103 (19)C10—H10B0.9600
N4—C71.366 (2)C10—H10C0.9600
N5—C121.264 (2)C12—H120.9300
N5—C111.387 (2)C13—C141.493 (3)
C1—C21.371 (3)C13—H13A0.9700
C2—C31.378 (3)C13—H13B0.9700
C2—H20.9300C14—H14A0.9600
C3—C41.378 (2)C14—H14B0.9600
C3—H30.9300C14—H14C0.9600
C8—O1—C9115.82 (15)O2—C8—O1123.82 (16)
C12—O3—C13117.92 (14)O2—C8—C7123.34 (17)
C1—N1—C5115.93 (15)O1—C8—C7112.83 (15)
C11—N2—N3111.41 (13)O1—C9—C10107.54 (18)
C11—N2—C6128.15 (13)O1—C9—H9A110.2
N3—N2—C6120.40 (13)C10—C9—H9A110.2
N4—N3—N2107.16 (13)O1—C9—H9B110.2
N3—N4—C7109.08 (13)C10—C9—H9B110.2
C12—N5—C11117.65 (14)H9A—C9—H9B108.5
N1—C1—C2125.22 (16)C9—C10—H10A109.5
N1—C1—Cl1115.20 (13)C9—C10—H10B109.5
C2—C1—Cl1119.57 (14)H10A—C10—H10B109.5
C1—C2—C3117.28 (16)C9—C10—H10C109.5
C1—C2—H2121.4H10A—C10—H10C109.5
C3—C2—H2121.4H10B—C10—H10C109.5
C4—C3—C2119.84 (16)N2—C11—N5119.02 (14)
C4—C3—H3120.1N2—C11—C7103.90 (13)
C2—C3—H3120.1N5—C11—C7137.02 (15)
C5—C4—C3117.18 (16)N5—C12—O3123.85 (16)
C5—C4—C6121.16 (15)N5—C12—H12118.1
C3—C4—C6121.65 (15)O3—C12—H12118.1
N1—C5—C4124.54 (16)O3—C13—C14106.49 (16)
N1—C5—H5117.7O3—C13—H13A110.4
C4—C5—H5117.7C14—C13—H13A110.4
N2—C6—C4112.19 (13)O3—C13—H13B110.4
N2—C6—H6A109.2C14—C13—H13B110.4
C4—C6—H6A109.2H13A—C13—H13B108.6
N2—C6—H6B109.2C13—C14—H14A109.5
C4—C6—H6B109.2C13—C14—H14B109.5
H6A—C6—H6B107.9H14A—C14—H14B109.5
N4—C7—C11108.44 (14)C13—C14—H14C109.5
N4—C7—C8123.09 (14)H14A—C14—H14C109.5
C11—C7—C8128.35 (15)H14B—C14—H14C109.5
C11—N2—N3—N4−0.55 (17)C9—O1—C8—C7−179.47 (14)
C6—N2—N3—N4−178.53 (13)N4—C7—C8—O2169.02 (17)
N2—N3—N4—C70.30 (17)C11—C7—C8—O2−6.6 (3)
C5—N1—C1—C20.0 (3)N4—C7—C8—O1−10.2 (2)
C5—N1—C1—Cl1−179.06 (13)C11—C7—C8—O1174.16 (15)
N1—C1—C2—C30.0 (3)C8—O1—C9—C10175.16 (19)
Cl1—C1—C2—C3179.07 (13)N3—N2—C11—N5178.28 (13)
C1—C2—C3—C40.2 (3)C6—N2—C11—N5−3.9 (2)
C2—C3—C4—C5−0.4 (2)N3—N2—C11—C70.55 (17)
C2—C3—C4—C6178.87 (15)C6—N2—C11—C7178.34 (14)
C1—N1—C5—C4−0.3 (3)C12—N5—C11—N2144.61 (16)
C3—C4—C5—N10.4 (3)C12—N5—C11—C7−38.6 (3)
C6—C4—C5—N1−178.81 (16)N4—C7—C11—N2−0.36 (17)
C11—N2—C6—C4−88.86 (19)C8—C7—C11—N2175.79 (15)
N3—N2—C6—C488.75 (17)N4—C7—C11—N5−177.45 (17)
C5—C4—C6—N285.12 (19)C8—C7—C11—N5−1.3 (3)
C3—C4—C6—N2−94.08 (18)C11—N5—C12—O3177.40 (16)
N3—N4—C7—C110.04 (18)C13—O3—C12—N5−0.1 (3)
N3—N4—C7—C8−176.36 (15)C12—O3—C13—C14−169.17 (18)
C9—O1—C8—O21.3 (3)
D—H···AD—HH···AD···AD—H···A
C2—H2···N3i0.932.573.488 (2)167
C9—H9A···O2ii0.972.533.246 (3)131
C12—H12···O20.932.442.924 (3)112
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯N3i0.932.573.488 (2)167
C9—H9A⋯O2ii0.972.533.246 (3)131
C12—H12⋯O20.932.442.924 (3)112

Symmetry codes: (i) ; (ii) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  2 in total

1.  Ethyl 1-[(2-chloro-1,3-thia-zol-5-yl)methyl]-5-methyl-1H-1,2,3-triazole-4-carboxylate.

Authors:  Xiao-Bao Chen; Feng-Mei Sun; Jing Xu; Zuan Ma; Ai-Hua Zheng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-20

2.  Ethyl 3-{[(3-methyl-anilino)(1H-1,2,4-triazol-1-yl)methyl-idene]amino}-1-benzofuran-2-carboxyl-ate.

Authors:  Hai-Tao Gao; Li Li; Jun-Kai Ma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-30
  2 in total

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