| Literature DB >> 21581318 |
Mohd Basyaruddin Abdul Rahman, Khairulazhar Jumbri, Kamaliah Sirat, Reza Kia, Hoong-Kun Fun.
Abstract
In the crystal structure of the title compound, C(8)H(20)N(+)·C(4)H(5)O(6) (-)·2H(2)O, the ions and water mol-ecules are linked via O-H⋯O and C-H⋯O hydrogen bonds, forming a two-dimensional network parallel to (001).Entities:
Year: 2008 PMID: 21581318 PMCID: PMC2960025 DOI: 10.1107/S1600536808036969
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H20N+·C4H5O6–·2H2O | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 4555 reflections |
| θ = 2.6–33.5º | |
| µ = 0.11 mm−1 | |
| β = 106.553 (1)º | Block, colourless |
| 0.47 × 0.45 × 0.17 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 3579 independent reflections |
| Radiation source: fine-focus sealed tube | 3240 reflections with |
| Monochromator: graphite | |
| θmax = 35.0º | |
| φ and ω scans | θmin = 2.6º |
| Absorption correction: multi-scan(SADABS; Bruker, 2005) | |
| 10518 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max = 0.001 | |
| 3579 reflections | Δρmax = 0.29 e Å−3 |
| 218 parameters | Δρmin = −0.23 e Å−3 |
| 1 restraint | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.71436 (14) | 0.19227 (7) | −0.03566 (13) | 0.01818 (18) | |
| O2 | 1.02013 (14) | 0.23261 (7) | 0.04449 (14) | 0.0201 (2) | |
| O3 | 0.61932 (14) | 0.36818 (7) | −0.18764 (12) | 0.01677 (18) | |
| O4 | 0.68458 (16) | 0.39108 (7) | 0.17930 (13) | 0.0190 (2) | |
| C1 | 0.83853 (18) | 0.25107 (9) | −0.01824 (15) | 0.0138 (2) | |
| C2 | 0.79871 (18) | 0.35668 (9) | −0.06869 (15) | 0.0134 (2) | |
| H2A | 0.8929 | 0.3785 | −0.1246 | 0.016* | |
| C3 | 0.81928 (18) | 0.41837 (9) | 0.09447 (16) | 0.0144 (2) | |
| H3A | 0.9446 | 0.4064 | 0.1739 | 0.017* | |
| C4 | 0.80699 (19) | 0.52553 (9) | 0.04614 (16) | 0.0156 (2) | |
| N1 | 0.61784 (16) | 0.13577 (8) | 0.44527 (13) | 0.01415 (19) | |
| C5 | 0.68066 (19) | 0.05680 (10) | 0.34333 (17) | 0.0169 (2) | |
| H5A | 0.5698 | 0.0232 | 0.2745 | 0.020* | |
| H5B | 0.7406 | 0.0866 | 0.2638 | 0.020* | |
| C6 | 0.8153 (2) | −0.01643 (11) | 0.4516 (2) | 0.0249 (3) | |
| H6A | 0.8474 | −0.0632 | 0.3769 | 0.037* | |
| H6B | 0.7563 | −0.0481 | 0.5285 | 0.037* | |
| H6C | 0.9275 | 0.0156 | 0.5181 | 0.037* | |
| C7 | 0.78506 (19) | 0.18803 (10) | 0.56438 (16) | 0.0174 (2) | |
| H7A | 0.7381 | 0.2382 | 0.6249 | 0.021* | |
| H7B | 0.8550 | 0.1428 | 0.6507 | 0.021* | |
| C8 | 0.9195 (2) | 0.23319 (12) | 0.47596 (19) | 0.0227 (3) | |
| H8A | 1.0203 | 0.2644 | 0.5609 | 0.034* | |
| H8B | 0.8532 | 0.2797 | 0.3926 | 0.034* | |
| H8C | 0.9703 | 0.1841 | 0.4183 | 0.034* | |
| C9 | 0.50734 (19) | 0.09482 (11) | 0.56176 (16) | 0.0186 (2) | |
| H9A | 0.5880 | 0.0505 | 0.6428 | 0.022* | |
| H9B | 0.4763 | 0.1471 | 0.6286 | 0.022* | |
| C10 | 0.3270 (2) | 0.04279 (11) | 0.46895 (19) | 0.0218 (3) | |
| H10A | 0.2674 | 0.0194 | 0.5523 | 0.033* | |
| H10B | 0.3558 | −0.0104 | 0.4047 | 0.033* | |
| H10C | 0.2437 | 0.0864 | 0.3910 | 0.033* | |
| C11 | 0.49727 (18) | 0.20335 (10) | 0.31067 (15) | 0.0157 (2) | |
| H11A | 0.5737 | 0.2288 | 0.2411 | 0.019* | |
| H11B | 0.3959 | 0.1665 | 0.2344 | 0.019* | |
| C12 | 0.4121 (2) | 0.28706 (11) | 0.38285 (18) | 0.0205 (3) | |
| H12A | 0.3389 | 0.3259 | 0.2891 | 0.031* | |
| H12B | 0.5110 | 0.3253 | 0.4562 | 0.031* | |
| H12C | 0.3325 | 0.2630 | 0.4489 | 0.031* | |
| O1W | 0.30848 (16) | 0.27561 (10) | 0.84652 (15) | 0.0243 (2) | |
| O2W | 0.69834 (18) | 0.97603 (9) | 0.95574 (16) | 0.0252 (2) | |
| O5 | 0.93673 (14) | 0.55475 (7) | −0.01728 (15) | 0.0218 (2) | |
| O6 | 0.67739 (15) | 0.57466 (8) | 0.07043 (14) | 0.0226 (2) | |
| H1O2 | 1.043 (4) | 0.161 (2) | 0.045 (3) | 0.045 (7)* | |
| H1O3 | 0.534 (3) | 0.3304 (19) | −0.159 (3) | 0.036 (6)* | |
| H1O4 | 0.590 (3) | 0.422 (2) | 0.122 (3) | 0.033 (6)* | |
| H1W1 | 0.260 (4) | 0.306 (2) | 0.911 (4) | 0.055 (8)* | |
| H2W1 | 0.316 (4) | 0.216 (2) | 0.884 (3) | 0.043 (7)* | |
| H1W2 | 0.818 (4) | 0.9985 (19) | 0.980 (3) | 0.037 (6)* | |
| H2W2 | 0.630 (4) | 1.025 (2) | 0.962 (3) | 0.039 (6)* |
| O1 | 0.0174 (4) | 0.0115 (4) | 0.0261 (4) | −0.0015 (3) | 0.0070 (4) | 0.0010 (4) |
| O2 | 0.0150 (4) | 0.0121 (4) | 0.0307 (5) | 0.0009 (4) | 0.0027 (4) | −0.0024 (4) |
| O3 | 0.0174 (4) | 0.0135 (4) | 0.0167 (4) | −0.0013 (3) | 0.0006 (3) | 0.0020 (3) |
| O4 | 0.0242 (5) | 0.0155 (4) | 0.0191 (4) | 0.0013 (4) | 0.0091 (4) | 0.0022 (3) |
| C1 | 0.0164 (5) | 0.0107 (5) | 0.0146 (4) | 0.0011 (4) | 0.0050 (4) | −0.0005 (4) |
| C2 | 0.0151 (5) | 0.0095 (5) | 0.0156 (4) | −0.0007 (4) | 0.0040 (4) | 0.0005 (4) |
| C3 | 0.0161 (5) | 0.0096 (5) | 0.0162 (5) | 0.0001 (4) | 0.0024 (4) | −0.0005 (4) |
| C4 | 0.0164 (5) | 0.0104 (5) | 0.0180 (5) | −0.0001 (4) | 0.0013 (4) | −0.0010 (4) |
| N1 | 0.0153 (5) | 0.0138 (5) | 0.0131 (4) | −0.0007 (4) | 0.0037 (3) | 0.0003 (3) |
| C5 | 0.0185 (5) | 0.0134 (5) | 0.0191 (5) | −0.0001 (5) | 0.0057 (4) | −0.0026 (4) |
| C6 | 0.0232 (7) | 0.0160 (6) | 0.0349 (7) | 0.0027 (5) | 0.0071 (6) | 0.0032 (5) |
| C7 | 0.0168 (5) | 0.0175 (6) | 0.0156 (5) | −0.0016 (5) | 0.0007 (4) | −0.0013 (4) |
| C8 | 0.0191 (6) | 0.0217 (7) | 0.0256 (6) | −0.0052 (5) | 0.0036 (5) | 0.0012 (5) |
| C9 | 0.0200 (6) | 0.0209 (6) | 0.0162 (5) | −0.0018 (5) | 0.0073 (4) | 0.0025 (4) |
| C10 | 0.0196 (6) | 0.0221 (7) | 0.0254 (6) | −0.0029 (5) | 0.0089 (5) | 0.0024 (5) |
| C11 | 0.0171 (5) | 0.0147 (5) | 0.0140 (4) | 0.0012 (4) | 0.0024 (4) | 0.0012 (4) |
| C12 | 0.0213 (6) | 0.0161 (6) | 0.0235 (6) | 0.0025 (5) | 0.0055 (5) | −0.0020 (5) |
| O1W | 0.0200 (5) | 0.0272 (6) | 0.0262 (5) | −0.0003 (4) | 0.0076 (4) | 0.0019 (4) |
| O2W | 0.0250 (6) | 0.0191 (5) | 0.0321 (5) | −0.0048 (4) | 0.0094 (4) | −0.0044 (4) |
| O5 | 0.0187 (4) | 0.0118 (4) | 0.0361 (5) | −0.0022 (4) | 0.0096 (4) | 0.0006 (4) |
| O6 | 0.0245 (5) | 0.0164 (5) | 0.0286 (5) | 0.0071 (4) | 0.0102 (4) | 0.0021 (4) |
| O1—C1 | 1.2084 (16) | C6—H6C | 0.96 |
| O2—C1 | 1.3203 (15) | C7—C8 | 1.516 (2) |
| O2—H1O2 | 1.01 (3) | C7—H7A | 0.97 |
| O3—C2 | 1.4085 (16) | C7—H7B | 0.97 |
| O3—H1O3 | 0.90 (3) | C8—H8A | 0.96 |
| O4—C3 | 1.4124 (17) | C8—H8B | 0.96 |
| O4—H1O4 | 0.84 (3) | C8—H8C | 0.96 |
| C1—C2 | 1.5292 (17) | C9—C10 | 1.516 (2) |
| C2—C3 | 1.5400 (17) | C9—H9A | 0.97 |
| C2—H2A | 0.98 | C9—H9B | 0.97 |
| C3—C4 | 1.5356 (18) | C10—H10A | 0.96 |
| C3—H3A | 0.98 | C10—H10B | 0.96 |
| C4—O6 | 1.2382 (17) | C10—H10C | 0.96 |
| C4—O5 | 1.2763 (17) | C11—C12 | 1.516 (2) |
| N1—C11 | 1.5178 (16) | C11—H11A | 0.97 |
| N1—C7 | 1.5183 (17) | C11—H11B | 0.97 |
| N1—C9 | 1.5205 (16) | C12—H12A | 0.96 |
| N1—C5 | 1.5209 (17) | C12—H12B | 0.96 |
| C5—C6 | 1.515 (2) | C12—H12C | 0.96 |
| C5—H5A | 0.97 | O1W—H1W1 | 0.83 (3) |
| C5—H5B | 0.97 | O1W—H2W1 | 0.88 (3) |
| C6—H6A | 0.96 | O2W—H1W2 | 0.91 (3) |
| C6—H6B | 0.96 | O2W—H2W2 | 0.85 (3) |
| C1—O2—H1O2 | 110.3 (15) | C8—C7—N1 | 115.36 (10) |
| C2—O3—H1O3 | 110.7 (16) | C8—C7—H7A | 108.4 |
| C3—O4—H1O4 | 101.3 (17) | N1—C7—H7A | 108.4 |
| O1—C1—O2 | 124.88 (12) | C8—C7—H7B | 108.4 |
| O1—C1—C2 | 122.38 (11) | N1—C7—H7B | 108.4 |
| O2—C1—C2 | 112.74 (11) | H7A—C7—H7B | 107.5 |
| O3—C2—C1 | 111.28 (10) | C7—C8—H8A | 109.5 |
| O3—C2—C3 | 111.23 (10) | C7—C8—H8B | 109.5 |
| C1—C2—C3 | 110.06 (10) | H8A—C8—H8B | 109.5 |
| O3—C2—H2A | 108.0 | C7—C8—H8C | 109.5 |
| C1—C2—H2A | 108.0 | H8A—C8—H8C | 109.5 |
| C3—C2—H2A | 108.0 | H8B—C8—H8C | 109.5 |
| O4—C3—C4 | 112.59 (11) | C10—C9—N1 | 115.34 (10) |
| O4—C3—C2 | 110.58 (10) | C10—C9—H9A | 108.4 |
| C4—C3—C2 | 109.84 (10) | N1—C9—H9A | 108.4 |
| O4—C3—H3A | 107.9 | C10—C9—H9B | 108.4 |
| C4—C3—H3A | 107.9 | N1—C9—H9B | 108.4 |
| C2—C3—H3A | 107.9 | H9A—C9—H9B | 107.5 |
| O6—C4—O5 | 126.43 (13) | C9—C10—H10A | 109.5 |
| O6—C4—C3 | 119.17 (12) | C9—C10—H10B | 109.5 |
| O5—C4—C3 | 114.40 (11) | H10A—C10—H10B | 109.5 |
| C11—N1—C7 | 111.31 (10) | C9—C10—H10C | 109.5 |
| C11—N1—C9 | 111.21 (10) | H10A—C10—H10C | 109.5 |
| C7—N1—C9 | 105.96 (9) | H10B—C10—H10C | 109.5 |
| C11—N1—C5 | 105.62 (9) | C12—C11—N1 | 115.18 (10) |
| C7—N1—C5 | 111.49 (10) | C12—C11—H11A | 108.5 |
| C9—N1—C5 | 111.36 (10) | N1—C11—H11A | 108.5 |
| C6—C5—N1 | 115.24 (11) | C12—C11—H11B | 108.5 |
| C6—C5—H5A | 108.5 | N1—C11—H11B | 108.5 |
| N1—C5—H5A | 108.5 | H11A—C11—H11B | 107.5 |
| C6—C5—H5B | 108.5 | C11—C12—H12A | 109.5 |
| N1—C5—H5B | 108.5 | C11—C12—H12B | 109.5 |
| H5A—C5—H5B | 107.5 | H12A—C12—H12B | 109.5 |
| C5—C6—H6A | 109.5 | C11—C12—H12C | 109.5 |
| C5—C6—H6B | 109.5 | H12A—C12—H12C | 109.5 |
| H6A—C6—H6B | 109.5 | H12B—C12—H12C | 109.5 |
| C5—C6—H6C | 109.5 | H1W1—O1W—H2W1 | 106 (3) |
| H6A—C6—H6C | 109.5 | H1W2—O2W—H2W2 | 106 (2) |
| H6B—C6—H6C | 109.5 | ||
| O1—C1—C2—O3 | −20.73 (16) | C11—N1—C5—C6 | 175.99 (11) |
| O2—C1—C2—O3 | 159.12 (10) | C7—N1—C5—C6 | 54.95 (15) |
| O1—C1—C2—C3 | 103.04 (13) | C9—N1—C5—C6 | −63.16 (15) |
| O2—C1—C2—C3 | −77.11 (13) | C11—N1—C7—C8 | −60.40 (15) |
| O3—C2—C3—O4 | 60.68 (13) | C9—N1—C7—C8 | 178.57 (12) |
| C1—C2—C3—O4 | −63.12 (13) | C5—N1—C7—C8 | 57.25 (15) |
| O3—C2—C3—C4 | −64.19 (13) | C11—N1—C9—C10 | 56.22 (15) |
| C1—C2—C3—C4 | 172.01 (10) | C7—N1—C9—C10 | 177.31 (12) |
| O4—C3—C4—O6 | −5.84 (16) | C5—N1—C9—C10 | −61.29 (15) |
| C2—C3—C4—O6 | 117.86 (13) | C7—N1—C11—C12 | −60.88 (14) |
| O4—C3—C4—O5 | 174.27 (11) | C9—N1—C11—C12 | 57.02 (14) |
| C2—C3—C4—O5 | −62.03 (14) | C5—N1—C11—C12 | 177.97 (12) |
| H··· | ||||
| O2—H1O2···O5i | 1.00 (2) | 1.52 (2) | 2.5108 (13) | 173 (2) |
| O3—H1O3···O1Wii | 0.91 (2) | 1.85 (2) | 2.7191 (14) | 162 (2) |
| O4—H1O4···O2Wiii | 0.84 (2) | 2.18 (2) | 2.9780 (16) | 160 (2) |
| O1W—H1W1···O2iv | 0.82 (2) | 2.56 (2) | 3.0668 (14) | 122 (2) |
| O1W—H1W1···O2Wv | 0.82 (2) | 2.57 (2) | 3.2155 (16) | 137 (2) |
| O1W—H2W1···O6iii | 0.88 (3) | 2.00 (3) | 2.8672 (15) | 171 (2) |
| O2W—H2W2···O1vi | 0.84 (2) | 2.40 (2) | 3.0082 (14) | 129 (2) |
| C5—H5A···O3vii | 0.97 | 2.56 | 3.4344 (15) | 151 |
| C8—H8B···O4 | 0.96 | 2.38 | 3.3447 (16) | 178 |
| C10—H10B···O3vii | 0.96 | 2.47 | 3.4195 (16) | 168 |
| C11—H11A···O4 | 0.97 | 2.50 | 3.2693 (15) | 136 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H1 | 1.00 (2) | 1.52 (2) | 2.5108 (13) | 173 (2) |
| O3—H1 | 0.91 (2) | 1.85 (2) | 2.7191 (14) | 162 (2) |
| O4—H1 | 0.84 (2) | 2.18 (2) | 2.9780 (16) | 160 (2) |
| O1 | 0.82 (2) | 2.56 (2) | 3.0668 (14) | 122 (2) |
| O1 | 0.82 (2) | 2.57 (2) | 3.2155 (16) | 137 (2) |
| O1 | 0.88 (3) | 2.00 (3) | 2.8672 (15) | 171 (2) |
| O2 | 0.84 (2) | 2.40 (2) | 3.0082 (14) | 129 (2) |
| C5—H5 | 0.97 | 2.56 | 3.4344 (15) | 151 |
| C8—H8 | 0.96 | 2.38 | 3.3447 (16) | 178 |
| C10—H10 | 0.96 | 2.47 | 3.4195 (16) | 168 |
| C11—H11 | 0.97 | 2.50 | 3.2693 (15) | 136 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .