Literature DB >> 21581304

4-Acetyl-3,3-diethyl-5-hydr-oxy-2-morpholino-2,3-dihydro-1-benzofuran.

Andrés Vega, Oney Ramírez-Rodríguez, Maximiliano Martínez-Cifuentes, Andrés Ibañez, Ramiro Araya-Maturana.   

Abstract

In the title compound, C(18)H(25)NO(4), the benzofuran ring is almost planar and the morpholino ring displays a chair conformation. The packing of compound has a one-dimensional structure constructed through inter-molecular O-H⋯O hydrogen bonds. The conformation is stabilized by intra-molecular C-H⋯N and C-H⋯O inter-actions.

Entities:  

Year:  2008        PMID: 21581304      PMCID: PMC2959820          DOI: 10.1107/S1600536808034065

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological activity, see: Araya-Maturana et al. (2002 ▶, 2006 ▶). For related structures, see: Dusausoy et al. (1973 ▶); Filarowski et al. (2005 ▶); Huang et al. (2004 ▶). For the synthesis, see: Castro et al. (1983 ▶). For hydrogen bonding, see: Desiraju (2002 ▶). For puckering parameters, see: Cremer & Pople, 1975 ▶).

Experimental

Crystal data

C18H25NO4 M = 319.39 Orthorhombic, a = 7.7769 (2) Å b = 19.4256 (5) Å c = 22.3875 (6) Å V = 3382.10 (15) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 150 (2) K 0.43 × 0.30 × 0.30 mm

Data collection

Siemens SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker 1999 ▶) T min = 0.963, T max = 0.974 19635 measured reflections 2988 independent reflections 2537 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.099 S = 1.04 2988 reflections 215 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.22 e Å−3 Δρmin = −0.15 e Å−3 Data collection: SMART-NT (Bruker, 2001 ▶); cell refinement: SAINT-NT (Bruker, 1999 ▶); data reduction: SAINT-NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL-NT (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL-NT. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808034065/pv2104sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808034065/pv2104Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H25NO4F000 = 1376
Mr = 319.39Dx = 1.255 Mg m3
Orthorhombic, PbcaMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 6371 reflections
a = 7.7769 (2) Åθ = 2.3–24.8º
b = 19.4256 (5) ŵ = 0.09 mm1
c = 22.3875 (6) ÅT = 150 (2) K
V = 3382.10 (15) Å3Block, colorless
Z = 80.43 × 0.30 × 0.30 mm
Siemens SMART CCD area-detector diffractometer2988 independent reflections
Radiation source: fine-focus sealed tube2537 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.027
T = 150(2) Kθmax = 25.0º
φ and ω scansθmin = 1.8º
Absorption correction: part of the refinement model (ΔF)(SADABS; Bruker 1999)h = −9→9
Tmin = 0.963, Tmax = 0.974k = −23→23
19635 measured reflectionsl = −26→26
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.037H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.099  w = 1/[σ2(Fo2) + (0.0508P)2 + 1.1025P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
2988 reflectionsΔρmax = 0.22 e Å3
215 parametersΔρmin = −0.15 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Experimental. Proton and 13C NMR spectra were acquired using a Bruker AVANCE DRX 300 spectrometer operating at 300.13 MHz (1H) or 75.47 MHz (13 C). All measurements were carried out at a probe temperature of 300 K.1H-RMN(CDCl3): 0.65(3H, t, J = 7 Hz); 1.05(3H, t, J = 7 Hz); 1.59–1.85 (4H, m, 2XCH2-CH3); 2.55(3H, S, CH3CO); 2.51–2.61(2H, m, CH2); 2.66–2.78(2H, m, CH2); 3.55–3.70(4H, m, 2XCH2); 4.71(1H, s, CH); 6.19(1H, s broad, OH); 6.56(1H, d, J = 8.5 Hz); 6.62(1H, d, J = 8.5 Hz).13C-RMN(CDCl3): 8.36; 10.18; 25.45; 32.68; 32.90; 49.81; 52.00; 66.93; 106.51; 109.63; 115.36; 126.63; 129.92; 146.31; 153.25; 205.62.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.Least-squares planes (x,y,z in crystal coordinates) and deviations from them (* indicates atom used to define plane)7.0500 (0.0020) x + 7.3246 (0.0105) y + 4.2493 (0.0126) z = 12.9211 (0.0092)* -0.0040 (0.0010) C4 * 0.0120 (0.0009) C5 * -0.0103 (0.0010) C6 * 0.0006 (0.0010) C7 * 0.0076 (0.0011) C8 * -0.0059 (0.0010) C9Rms deviation of fitted atoms = 0.00781.4062(0.0062) x + 16.5869(0.0074) y - 10.9267(0.0135) z = 13.1527(0.0123)Angle to previous plane (with approximate e.s.d.) =S 66.84 (0.06)* 0.0007 (0.0003) C5 * -0.0022 (0.0011) C14 * 0.0007 (0.0003) C15 * 0.0009 (0.0004) O3
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.80326 (14)0.80844 (5)0.31337 (4)0.0345 (3)
C20.74318 (19)0.78750 (7)0.37275 (6)0.0280 (3)
H200.84280.76590.39390.034*
N10.60986 (15)0.73632 (6)0.36854 (5)0.0270 (3)
C160.6798 (2)0.66749 (7)0.35651 (7)0.0328 (3)
H16A0.77120.65670.38590.039*
H16B0.73140.66640.31610.039*
C170.5395 (2)0.61465 (8)0.36064 (7)0.0360 (4)
H17A0.58790.56840.35270.043*
H17B0.49130.61460.40160.043*
O40.40535 (14)0.62893 (5)0.31851 (5)0.0367 (3)
C180.3362 (2)0.69617 (7)0.32890 (7)0.0355 (4)
H18A0.28270.69760.36900.043*
H18B0.24570.70590.29900.043*
C190.47396 (19)0.75074 (8)0.32496 (6)0.0320 (3)
H19A0.52320.75140.28420.038*
H19B0.42320.79650.33310.038*
C30.69878 (18)0.85594 (7)0.40661 (6)0.0264 (3)
C100.53656 (19)0.85133 (7)0.44592 (6)0.0292 (3)
H10A0.51180.89780.46190.035*
H10B0.43850.83800.42020.035*
C110.5450 (2)0.80105 (8)0.49828 (7)0.0399 (4)
H11A0.57570.75520.48350.060*
H11B0.43270.79910.51800.060*
H11C0.63210.81670.52690.060*
C120.85520 (19)0.87683 (8)0.44551 (7)0.0328 (3)
H12A0.82710.92050.46610.039*
H12B0.87130.84120.47670.039*
C131.0247 (2)0.88622 (10)0.41292 (8)0.0492 (4)
H13A1.05830.84270.39420.074*
H13B1.11360.90040.44140.074*
H13C1.01170.92170.38210.074*
C40.67804 (17)0.90534 (7)0.35435 (6)0.0248 (3)
C50.61288 (17)0.97222 (7)0.35094 (6)0.0239 (3)
C140.55496 (19)1.01250 (7)0.40490 (6)0.0262 (3)
O30.65792 (14)1.02913 (5)0.44311 (4)0.0361 (3)
C150.3689 (2)1.03120 (8)0.40908 (7)0.0356 (4)
H15A0.34771.05540.44680.053*
H15B0.29900.98930.40770.053*
H15C0.33811.06120.37550.053*
C60.60992 (18)1.00459 (7)0.29479 (6)0.0257 (3)
O20.54332 (14)1.07011 (5)0.29248 (5)0.0315 (3)
C70.67545 (19)0.97197 (7)0.24488 (6)0.0303 (3)
H70.67430.99510.20750.036*
C80.7427 (2)0.90606 (7)0.24851 (7)0.0333 (3)
H80.78850.88370.21430.040*
C90.74103 (18)0.87401 (7)0.30338 (6)0.0284 (3)
H20.562 (3)1.0879 (10)0.2559 (10)0.063 (6)*
U11U22U33U12U13U23
O10.0429 (6)0.0272 (5)0.0333 (6)0.0089 (5)0.0125 (5)0.0046 (4)
C20.0319 (7)0.0258 (7)0.0265 (7)0.0034 (6)0.0022 (6)0.0045 (6)
N10.0327 (6)0.0213 (6)0.0270 (6)0.0044 (5)−0.0028 (5)0.0003 (5)
C160.0385 (8)0.0254 (7)0.0344 (8)0.0067 (6)−0.0023 (7)−0.0021 (6)
C170.0466 (9)0.0255 (7)0.0359 (8)0.0036 (7)−0.0054 (7)−0.0019 (6)
O40.0447 (6)0.0306 (6)0.0349 (6)0.0018 (5)−0.0063 (5)−0.0089 (4)
C180.0387 (8)0.0343 (8)0.0334 (8)0.0064 (7)−0.0059 (7)−0.0076 (6)
C190.0398 (8)0.0288 (7)0.0274 (7)0.0075 (7)−0.0043 (6)−0.0005 (6)
C30.0305 (7)0.0222 (7)0.0263 (7)0.0007 (6)0.0004 (6)0.0026 (5)
C100.0362 (8)0.0248 (7)0.0265 (7)−0.0007 (6)0.0046 (6)0.0005 (6)
C110.0569 (10)0.0318 (8)0.0311 (8)−0.0051 (7)0.0082 (7)0.0046 (6)
C120.0366 (8)0.0286 (8)0.0333 (8)−0.0005 (6)−0.0056 (6)0.0051 (6)
C130.0362 (9)0.0511 (11)0.0603 (11)−0.0074 (8)−0.0052 (8)0.0048 (9)
C40.0241 (7)0.0252 (7)0.0252 (7)−0.0020 (5)0.0009 (5)0.0029 (5)
C50.0245 (7)0.0216 (7)0.0257 (7)−0.0044 (5)0.0000 (5)0.0007 (5)
C140.0360 (8)0.0176 (6)0.0249 (7)−0.0042 (6)−0.0015 (6)0.0031 (5)
O30.0437 (6)0.0339 (6)0.0306 (6)−0.0042 (5)−0.0063 (5)−0.0040 (4)
C150.0388 (9)0.0380 (8)0.0301 (8)0.0050 (7)0.0022 (6)−0.0037 (6)
C60.0279 (7)0.0207 (7)0.0284 (7)−0.0036 (6)−0.0025 (6)0.0022 (5)
O20.0446 (6)0.0210 (5)0.0288 (5)0.0013 (4)−0.0005 (5)0.0042 (4)
C70.0374 (8)0.0304 (7)0.0231 (7)−0.0019 (6)0.0032 (6)0.0066 (6)
C80.0406 (8)0.0314 (8)0.0278 (7)0.0028 (6)0.0106 (7)0.0008 (6)
C90.0301 (7)0.0238 (7)0.0314 (7)0.0023 (6)0.0055 (6)0.0018 (6)
O1—C91.3808 (17)C11—H11A0.9800
O1—C21.4665 (16)C11—H11B0.9800
C2—N11.4395 (18)C11—H11C0.9800
C2—C31.5690 (19)C12—C131.518 (2)
C2—H201.0000C12—H12A0.9900
N1—C191.4654 (18)C12—H12B0.9900
N1—C161.4683 (17)C13—H13A0.9800
C16—C171.501 (2)C13—H13B0.9800
C16—H16A0.9900C13—H13C0.9800
C16—H16B0.9900C4—C91.3828 (19)
C17—O41.4338 (18)C4—C51.3966 (19)
C17—H17A0.9900C5—C61.4057 (18)
C17—H17B0.9900C5—C141.5082 (18)
O4—C181.4315 (17)C14—O31.2154 (17)
C18—C191.510 (2)C14—C151.494 (2)
C18—H18A0.9900C15—H15A0.9800
C18—H18B0.9900C15—H15B0.9800
C19—H19A0.9900C15—H15C0.9800
C19—H19B0.9900C6—O21.3752 (16)
C3—C41.5218 (18)C6—C71.382 (2)
C3—C101.5409 (19)O2—H20.90 (2)
C3—C121.550 (2)C7—C81.385 (2)
C10—C111.5270 (19)C7—H70.9500
C10—H10A0.9900C8—C91.377 (2)
C10—H10B0.9900C8—H80.9500
C9—O1—C2106.92 (10)C10—C11—H11A109.5
N1—C2—O1111.21 (11)C10—C11—H11B109.5
N1—C2—C3117.28 (11)H11A—C11—H11B109.5
O1—C2—C3105.85 (10)C10—C11—H11C109.5
N1—C2—H20107.4H11A—C11—H11C109.5
O1—C2—H20107.4H11B—C11—H11C109.5
C3—C2—H20107.4C13—C12—C3116.30 (13)
C2—N1—C19115.54 (11)C13—C12—H12A108.2
C2—N1—C16111.96 (11)C3—C12—H12A108.2
C19—N1—C16108.62 (11)C13—C12—H12B108.2
N1—C16—C17110.01 (12)C3—C12—H12B108.2
N1—C16—H16A109.7H12A—C12—H12B107.4
C17—C16—H16A109.7C12—C13—H13A109.5
N1—C16—H16B109.7C12—C13—H13B109.5
C17—C16—H16B109.7H13A—C13—H13B109.5
H16A—C16—H16B108.2C12—C13—H13C109.5
O4—C17—C16110.86 (12)H13A—C13—H13C109.5
O4—C17—H17A109.5H13B—C13—H13C109.5
C16—C17—H17A109.5C9—C4—C5119.53 (12)
O4—C17—H17B109.5C9—C4—C3108.62 (12)
C16—C17—H17B109.5C5—C4—C3131.84 (12)
H17A—C17—H17B108.1C4—C5—C6118.09 (12)
C18—O4—C17110.06 (11)C4—C5—C14123.18 (12)
O4—C18—C19111.39 (12)C6—C5—C14118.64 (12)
O4—C18—H18A109.4O3—C14—C15121.94 (13)
C19—C18—H18A109.4O3—C14—C5120.33 (13)
O4—C18—H18B109.4C15—C14—C5117.73 (12)
C19—C18—H18B109.4C14—C15—H15A109.5
H18A—C18—H18B108.0C14—C15—H15B109.5
N1—C19—C18109.80 (12)H15A—C15—H15B109.5
N1—C19—H19A109.7C14—C15—H15C109.5
C18—C19—H19A109.7H15A—C15—H15C109.5
N1—C19—H19B109.7H15B—C15—H15C109.5
C18—C19—H19B109.7O2—C6—C7122.20 (12)
H19A—C19—H19B108.2O2—C6—C5116.99 (12)
C4—C3—C10112.89 (11)C7—C6—C5120.79 (12)
C4—C3—C12110.49 (11)C6—O2—H2109.1 (13)
C10—C3—C12109.69 (11)C6—C7—C8121.04 (13)
C4—C3—C2100.72 (10)C6—C7—H7119.5
C10—C3—C2114.01 (11)C8—C7—H7119.5
C12—C3—C2108.70 (11)C9—C8—C7117.80 (13)
C11—C10—C3116.13 (13)C9—C8—H8121.1
C11—C10—H10A108.3C7—C8—H8121.1
C3—C10—H10A108.3C8—C9—O1123.93 (12)
C11—C10—H10B108.3C8—C9—C4122.71 (13)
C3—C10—H10B108.3O1—C9—C4113.36 (12)
H10A—C10—H10B107.4
O1—C2—C3—C419.89 (13)C10—C3—C4—C9−134.46 (13)
C2—C3—C4—C9−12.49 (15)C12—C3—C4—C9102.28 (14)
C3—C4—C9—O10.16 (17)C10—C3—C4—C546.6 (2)
N1—C16—C17—O459.38 (15)C12—C3—C4—C5−76.61 (19)
O4—C18—C19—N1−58.28 (15)C2—C3—C4—C5168.61 (14)
C9—O1—C2—N1107.54 (12)C9—C4—C5—C61.7 (2)
C9—O1—C2—C3−20.87 (14)C3—C4—C5—C6−179.54 (13)
O1—C2—N1—C19−46.17 (15)C9—C4—C5—C14−174.88 (13)
C3—C2—N1—C1975.82 (15)C3—C4—C5—C143.9 (2)
O1—C2—N1—C1678.87 (13)C4—C5—C14—O364.89 (18)
C3—C2—N1—C16−159.14 (12)C6—C5—C14—O3−111.63 (15)
C2—N1—C16—C17172.46 (11)C4—C5—C14—C15−115.53 (15)
C19—N1—C16—C17−58.76 (15)C6—C5—C14—C1567.95 (17)
C16—C17—O4—C18−58.14 (16)C4—C5—C6—O2179.26 (12)
C17—O4—C18—C1957.71 (15)C14—C5—C6—O2−4.04 (19)
C2—N1—C19—C18−175.35 (11)C4—C5—C6—C7−2.3 (2)
C16—N1—C19—C1857.90 (15)C14—C5—C6—C7174.40 (13)
N1—C2—C3—C4−104.83 (13)O2—C6—C7—C8179.62 (13)
N1—C2—C3—C1016.35 (17)C5—C6—C7—C81.3 (2)
O1—C2—C3—C10141.07 (11)C6—C7—C8—C90.4 (2)
N1—C2—C3—C12139.05 (12)C7—C8—C9—O1179.80 (13)
O1—C2—C3—C12−96.23 (13)C7—C8—C9—C4−1.1 (2)
C4—C3—C10—C11178.14 (12)C2—O1—C9—C8−167.31 (14)
C12—C3—C10—C11−58.16 (16)C2—O1—C9—C413.50 (16)
C2—C3—C10—C1163.99 (16)C5—C4—C9—C80.0 (2)
C4—C3—C12—C13−52.74 (17)C3—C4—C9—C8−179.04 (14)
C10—C3—C12—C13−177.83 (13)C5—C4—C9—O1179.21 (12)
C2—C3—C12—C1356.91 (16)
D—H···AD—HH···AD···AD—H···A
O2—H2···O4i0.90 (2)1.86 (2)2.7639 (14)177 (2)
C11—H11A···N10.982.613.205 (2)119
C12—H12A···O30.992.543.333 (2)137
C15—H15C···O20.982.463.037 (2)118
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯O4i0.90 (2)1.86 (2)2.7639 (14)177 (2)
C11—H11A⋯N10.982.613.205 (2)119
C12—H12A⋯O30.992.543.333 (2)137
C15—H15C⋯O20.982.463.037 (2)118

Symmetry code: (i) .

  4 in total

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Ramiro Araya-Maturana; Wilson Cardona; Bruce K Cassels; Tomás Delgado-Castro; Jorge Ferreira; Dante Miranda; Mario Pavani; Hernán Pessoa-Mahana; Jorge Soto-Delgado; Boris Weiss-López
Journal:  Bioorg Med Chem       Date:  2006-02-28       Impact factor: 3.641

Review 3.  Hydrogen bridges in crystal engineering: interactions without borders.

Authors:  Gautam R Desiraju
Journal:  Acc Chem Res       Date:  2002-07       Impact factor: 22.384

4.  Effects of 4,4-dimethyl-5,8-dihydroxynaphtalene-1-one and 4,4-dimethyl-5,8-dihydroxytetralone derivatives on tumor cell respiration.

Authors:  Ramiro Araya-Maturana; Tomás Delgado-Castro; Mario Gárate; Jorge Ferreira; Mario Pavani; Hernán Pessoa-Mahana; Bruce K Cassels
Journal:  Bioorg Med Chem       Date:  2002-09       Impact factor: 3.641

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1.  8,8-Diethyl-1,4,5,8-tetra-hydro-naphthalene-1,4,5-trione.

Authors:  Andrés Vega; Oney Ramirez-Rodríguez; Maximiliano Martínez-Cifuentes; Andrés Ibañez; Ramiro Araya-Maturana
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-17
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