Literature DB >> 21581245

1-Allyl-3-amino-1H-pyrazole-4-carboxylic acid.

Gong-Chun Li, Li-Ye Wang, Ran Zhu, Feng-Ling Yang.   

Abstract

The title compound, C(7)H(9)N(3)O(2), was prepared by alkaline hydrolysis of ethyl 1-allyl-3-amino-1H-pyrazole-4-carboxyl-ate. The crystal structure is stabilized by three types of inter-molecular hydrogen bond (N-H⋯O, N-H⋯N and O-H⋯N).

Entities:  

Year:  2008        PMID: 21581245      PMCID: PMC2959844          DOI: 10.1107/S1600536808035538

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of the biological activities of pyrazole derivatives, see: Malhotra et al. (1997 ▶); Takao et al. (1994 ▶); Wang et al. (2005 ▶).

Experimental

Crystal data

C7H9N3O2 M = 167.17 Monoclinic, a = 8.966 (2) Å b = 8.531 (2) Å c = 10.266 (2) Å β = 95.57 (3)° V = 781.5 (3) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 113 (2) K 0.20 × 0.18 × 0.14 mm

Data collection

Rigaku Saturn CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.979, T max = 0.985 5773 measured reflections 1852 independent reflections 1631 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.085 S = 1.06 1852 reflections 121 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.29 e Å−3 Δρmin = −0.26 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: CrystalStructure (Rigaku/MSC, 2005 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808035538/lx2076sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808035538/lx2076Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H9N3O2F000 = 352
Mr = 167.17Dx = 1.421 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2299 reflections
a = 8.966 (2) Åθ = 2.4–27.9º
b = 8.531 (2) ŵ = 0.11 mm1
c = 10.266 (2) ÅT = 113 (2) K
β = 95.57 (3)ºPrism, colorless
V = 781.5 (3) Å30.20 × 0.18 × 0.14 mm
Z = 4
Rigaku Saturn CCD area-detector diffractometer1852 independent reflections
Radiation source: rotating anode1631 reflections with I > 2σ(I)
Monochromator: confocalRint = 0.025
Detector resolution: 7.31 pixels mm-1θmax = 27.9º
T = 113(2) Kθmin = 3.1º
ω and φ scansh = −7→11
Absorption correction: Multi-scan(CrystalClear; Rigaku/MSC, 2005)k = −11→11
Tmin = 0.979, Tmax = 0.985l = −13→13
5773 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.034H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.085  w = 1/[σ2(Fo2) + (0.0353P)2 + 0.3376P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
1852 reflectionsΔρmax = 0.29 e Å3
121 parametersΔρmin = −0.25 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.64833 (12)0.69316 (12)0.51583 (10)0.0123 (2)
C20.68026 (12)0.53444 (13)0.56126 (10)0.0122 (2)
C30.63332 (12)0.46275 (12)0.67507 (10)0.0116 (2)
C40.75001 (12)0.41422 (13)0.49875 (10)0.0134 (2)
H40.79350.42170.41820.016*
C50.79757 (13)0.12954 (13)0.54567 (11)0.0149 (2)
H5A0.82120.12410.45360.018*
H5B0.71690.05290.55700.018*
C60.93408 (13)0.08629 (14)0.63419 (11)0.0177 (2)
H61.02040.15080.63400.021*
C70.94070 (15)−0.03654 (16)0.71224 (12)0.0238 (3)
H7A0.8560−0.10300.71430.029*
H7B1.0302−0.05870.76650.029*
N10.55906 (11)0.53395 (11)0.77249 (9)0.0132 (2)
H1A0.5169 (17)0.4628 (18)0.8213 (15)0.024 (4)*
H1B0.4929 (18)0.6087 (19)0.7423 (15)0.025 (4)*
N20.67310 (10)0.31234 (11)0.68348 (9)0.0128 (2)
N30.74458 (10)0.28673 (11)0.57279 (9)0.0128 (2)
O10.57152 (9)0.78485 (9)0.57215 (8)0.01648 (19)
O20.70880 (9)0.72908 (10)0.40620 (8)0.01749 (19)
H2A0.663 (2)0.818 (2)0.3719 (19)0.049 (5)*
U11U22U33U12U13U23
C10.0129 (5)0.0125 (5)0.0113 (5)−0.0016 (4)0.0006 (4)0.0004 (4)
C20.0130 (5)0.0122 (5)0.0114 (5)0.0000 (4)0.0007 (4)0.0000 (4)
C30.0118 (5)0.0113 (5)0.0114 (5)−0.0008 (4)0.0001 (4)−0.0012 (4)
C40.0141 (5)0.0142 (5)0.0119 (5)0.0006 (4)0.0016 (4)0.0012 (4)
C50.0187 (5)0.0114 (5)0.0151 (5)0.0026 (4)0.0029 (4)−0.0025 (4)
C60.0151 (5)0.0168 (6)0.0215 (5)0.0026 (4)0.0032 (4)−0.0032 (4)
C70.0237 (6)0.0262 (7)0.0216 (6)0.0075 (5)0.0021 (5)0.0031 (5)
N10.0170 (5)0.0104 (4)0.0127 (4)0.0009 (4)0.0043 (4)0.0006 (3)
N20.0148 (4)0.0124 (5)0.0114 (4)0.0007 (3)0.0032 (3)−0.0012 (3)
N30.0146 (4)0.0124 (5)0.0116 (4)0.0015 (3)0.0027 (3)−0.0010 (3)
O10.0215 (4)0.0125 (4)0.0160 (4)0.0026 (3)0.0048 (3)−0.0005 (3)
O20.0216 (4)0.0160 (4)0.0160 (4)0.0043 (3)0.0077 (3)0.0058 (3)
C1—O11.2238 (13)C5—H5A0.9900
C1—O21.3316 (13)C5—H5B0.9900
C1—C21.4516 (15)C6—C71.3170 (17)
C2—C41.3902 (15)C6—H60.9500
C2—C31.4182 (14)C7—H7A0.9500
C3—N21.3323 (14)C7—H7B0.9500
C3—N11.3936 (14)N1—H1A0.894 (16)
C4—N31.3305 (14)N1—H1B0.905 (17)
C4—H40.9500N2—N31.3752 (13)
C5—N31.4585 (14)O2—H2A0.92 (2)
C5—C61.4980 (16)
O1—C1—O2123.11 (10)C6—C5—H5B109.2
O1—C1—C2123.16 (10)H5A—C5—H5B107.9
O2—C1—C2113.73 (9)C7—C6—C5123.43 (11)
C4—C2—C3104.18 (9)C7—C6—H6118.3
C4—C2—C1128.56 (10)C5—C6—H6118.3
C3—C2—C1127.00 (10)C6—C7—H7A120.0
N2—C3—N1121.12 (10)C6—C7—H7B120.0
N2—C3—C2111.70 (9)H7A—C7—H7B120.0
N1—C3—C2127.15 (10)C3—N1—H1A111.3 (10)
N3—C4—C2107.24 (9)C3—N1—H1B113.8 (10)
N3—C4—H4126.4H1A—N1—H1B111.8 (14)
C2—C4—H4126.4C3—N2—N3104.05 (9)
N3—C5—C6111.89 (9)C4—N3—N2112.83 (9)
N3—C5—H5A109.2C4—N3—C5127.73 (9)
C6—C5—H5A109.2N2—N3—C5119.37 (9)
N3—C5—H5B109.2C1—O2—H2A108.1 (12)
O1—C1—C2—C4171.64 (11)N3—C5—C6—C7121.64 (12)
O2—C1—C2—C4−7.54 (16)N1—C3—N2—N3−178.90 (9)
O1—C1—C2—C3−1.60 (17)C2—C3—N2—N3−0.81 (12)
O2—C1—C2—C3179.22 (10)C2—C4—N3—N20.52 (12)
C4—C2—C3—N21.12 (12)C2—C4—N3—C5177.29 (10)
C1—C2—C3—N2175.67 (10)C3—N2—N3—C40.18 (12)
C4—C2—C3—N1179.07 (10)C3—N2—N3—C5−176.89 (9)
C1—C2—C3—N1−6.38 (18)C6—C5—N3—C4109.64 (12)
C3—C2—C4—N3−0.95 (12)C6—C5—N3—N2−73.77 (12)
C1—C2—C4—N3−175.38 (10)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O1i0.894 (16)2.073 (16)2.9652 (13)175.7 (14)
N1—H1B···N2ii0.905 (17)2.457 (16)3.2187 (14)142.1 (13)
O2—H2A···N1iii0.92 (2)1.82 (2)2.7232 (14)166.8 (18)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O1i0.894 (16)2.073 (16)2.9652 (13)175.7 (14)
N1—H1B⋯N2ii0.905 (17)2.457 (16)3.2187 (14)142.1 (13)
O2—H2A⋯N1iii0.92 (2)1.82 (2)2.7232 (14)166.8 (18)

Symmetry codes: (i) ; (ii) ; (iii) .

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