| Literature DB >> 21581081 |
Shao-Yuan Chen, Chao Huang, Chu-Long Zhang, Yu-Zhe Chen, Fu-Cheng Lin.
Abstract
The title compound, C(16)H(16)O(8), is a potent nonspecific phyto-toxin. The crystal structure is the average of two tauto-mers, 5,6,7,9,10-penta-hydr-oxy-2-meth-oxy-7-methyl-1,4,5,6,7,8-hexa-hydro-anthracene-1,4-dione and 1,4,5,6,7-pentahydr-oxy-2-meth--oxy-7-methyl-5,6,7,8,9,10-hexa-hydro-anthracene-9,10-di-one. The cyclo-hexene rings in both tautomers display a half-chair conformation. An extensive O-H⋯O hydrogen-bonding network is present in the crystal structure.Entities:
Year: 2008 PMID: 21581081 PMCID: PMC2959567 DOI: 10.1107/S1600536808032030
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H16O8 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 5814 reflections |
| θ = 6.1–54.9° | |
| µ = 0.13 mm−1 | |
| β = 102.12 (2)° | Chunk, red |
| 0.30 × 0.20 × 0.08 mm | |
| Rigaku R-AXIS RAPID IP diffractometer | 1517 independent reflections |
| Radiation source: fine-focus sealed tube | 1282 reflections with |
| graphite | |
| Detector resolution: 10 pixels mm-1 | θmax = 26.0°, θmin = 3.2° |
| ω scans | |
| Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | |
| 6151 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 1517 reflections | Δρmax = 0.24 e Å−3 |
| 220 parameters | Δρmin = −0.19 e Å−3 |
| 1 restraint | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.009 (3) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| O1 | 0.4354 (2) | 0.3424 (4) | 0.34450 (13) | 0.0399 (5) | |
| H1A | 0.5153 | 0.3341 | 0.3968 | 0.060* | 0.50 |
| O2 | 0.1814 (2) | 0.3555 (4) | 0.19361 (12) | 0.0414 (5) | |
| O3 | −0.1725 (2) | 0.3863 (4) | 0.43528 (13) | 0.0384 (5) | |
| H3A | −0.1659 | 0.3844 | 0.4995 | 0.058* | 0.50 |
| O4 | −0.0420 (2) | 0.3933 (4) | 0.63061 (13) | 0.0370 (5) | |
| H4A | −0.1226 | 0.4012 | 0.5725 | 0.055* | 0.50 |
| O5 | 0.1000 (3) | 0.2810 (5) | 0.82507 (17) | 0.0571 (7) | |
| H5A | 0.0233 | 0.2963 | 0.7644 | 0.086* | |
| O6 | 0.3619 (2) | 0.4004 (4) | 0.97960 (12) | 0.0417 (5) | |
| H6A | 0.4364 | 0.3205 | 1.0303 | 0.063* | |
| O7 | 0.5068 (2) | 0.6526 (3) | 0.84879 (13) | 0.0336 (5) | |
| H7A | 0.5511 | 0.7105 | 0.7990 | 0.050* | |
| O8 | 0.5671 (2) | 0.3429 (4) | 0.54013 (13) | 0.0401 (6) | |
| H8A | 0.5559 | 0.3636 | 0.4666 | 0.060* | 0.50 |
| C1 | 0.2943 (3) | 0.3552 (4) | 0.37142 (18) | 0.0302 (6) | |
| C2 | 0.1464 (3) | 0.3632 (4) | 0.28875 (18) | 0.0303 (6) | |
| C3 | −0.0063 (3) | 0.3742 (5) | 0.31216 (18) | 0.0314 (6) | |
| H3 | −0.0996 | 0.3781 | 0.2587 | 0.038* | |
| C4 | −0.0247 (3) | 0.3798 (4) | 0.41735 (18) | 0.0284 (5) | |
| C5 | 0.1177 (3) | 0.3742 (4) | 0.50050 (17) | 0.0263 (5) | |
| C6 | 0.1023 (3) | 0.3820 (4) | 0.60602 (17) | 0.0268 (5) | |
| C7 | 0.2492 (3) | 0.3761 (5) | 0.68900 (17) | 0.0291 (6) | |
| C8 | 0.2301 (3) | 0.3980 (5) | 0.80142 (17) | 0.0311 (6) | |
| H8 | 0.2063 | 0.5396 | 0.8130 | 0.037* | |
| C9 | 0.3863 (3) | 0.3403 (4) | 0.87974 (18) | 0.0323 (6) | |
| H9 | 0.3996 | 0.1938 | 0.8790 | 0.039* | |
| C10 | 0.5382 (3) | 0.4387 (4) | 0.85300 (17) | 0.0309 (6) | |
| C11 | 0.5585 (3) | 0.3595 (5) | 0.74721 (17) | 0.0319 (6) | |
| H11A | 0.6425 | 0.4383 | 0.7240 | 0.038* | |
| H11B | 0.5970 | 0.2213 | 0.7552 | 0.038* | |
| C12 | 0.4022 (3) | 0.3671 (4) | 0.66537 (17) | 0.0294 (6) | |
| C13 | 0.4195 (3) | 0.3563 (4) | 0.55826 (18) | 0.0296 (6) | |
| C14 | 0.2770 (3) | 0.3626 (4) | 0.47627 (17) | 0.0262 (5) | |
| C15 | 0.0456 (3) | 0.3549 (6) | 0.10420 (18) | 0.0435 (8) | |
| H15A | −0.0220 | 0.2384 | 0.1068 | 0.065* | |
| H15B | 0.0881 | 0.3517 | 0.0417 | 0.065* | |
| H15C | −0.0196 | 0.4743 | 0.1048 | 0.065* | |
| C16 | 0.6936 (3) | 0.3933 (6) | 0.93488 (19) | 0.0408 (7) | |
| H16A | 0.7885 | 0.4434 | 0.9117 | 0.061* | |
| H16B | 0.7039 | 0.2505 | 0.9453 | 0.061* | |
| H16C | 0.6861 | 0.4575 | 0.9991 | 0.061* |
| O1 | 0.0294 (10) | 0.0644 (15) | 0.0268 (8) | 0.0039 (10) | 0.0076 (7) | −0.0058 (10) |
| O2 | 0.0318 (10) | 0.0719 (15) | 0.0203 (7) | 0.0052 (11) | 0.0050 (7) | −0.0025 (10) |
| O3 | 0.0233 (9) | 0.0584 (13) | 0.0343 (9) | 0.0031 (10) | 0.0082 (7) | 0.0005 (10) |
| O4 | 0.0279 (10) | 0.0541 (12) | 0.0311 (8) | −0.0002 (10) | 0.0112 (7) | −0.0016 (10) |
| O5 | 0.0513 (14) | 0.0811 (19) | 0.0421 (11) | −0.0192 (13) | 0.0170 (10) | 0.0069 (12) |
| O6 | 0.0528 (12) | 0.0518 (12) | 0.0226 (8) | 0.0093 (11) | 0.0126 (8) | 0.0056 (10) |
| O7 | 0.0444 (11) | 0.0318 (10) | 0.0262 (8) | −0.0028 (9) | 0.0112 (7) | 0.0001 (8) |
| O8 | 0.0223 (9) | 0.0710 (16) | 0.0279 (8) | 0.0015 (10) | 0.0073 (7) | −0.0065 (11) |
| C1 | 0.0294 (13) | 0.0370 (15) | 0.0262 (11) | 0.0026 (13) | 0.0101 (9) | −0.0003 (12) |
| C2 | 0.0326 (14) | 0.0360 (15) | 0.0233 (11) | 0.0014 (14) | 0.0079 (9) | −0.0003 (12) |
| C3 | 0.0298 (13) | 0.0360 (14) | 0.0274 (11) | 0.0032 (13) | 0.0035 (9) | 0.0003 (12) |
| C4 | 0.0249 (13) | 0.0297 (13) | 0.0307 (11) | 0.0012 (12) | 0.0064 (9) | 0.0003 (12) |
| C5 | 0.0274 (13) | 0.0282 (12) | 0.0249 (11) | 0.0006 (12) | 0.0089 (9) | 0.0005 (12) |
| C6 | 0.0267 (12) | 0.0279 (12) | 0.0278 (11) | −0.0006 (12) | 0.0103 (9) | −0.0021 (12) |
| C7 | 0.0317 (13) | 0.0334 (13) | 0.0245 (11) | −0.0020 (13) | 0.0108 (9) | −0.0003 (12) |
| C8 | 0.0335 (14) | 0.0369 (14) | 0.0261 (11) | −0.0011 (12) | 0.0137 (10) | 0.0017 (12) |
| C9 | 0.0411 (15) | 0.0348 (14) | 0.0232 (10) | 0.0016 (13) | 0.0117 (10) | 0.0021 (11) |
| C10 | 0.0363 (15) | 0.0338 (15) | 0.0224 (12) | 0.0012 (12) | 0.0055 (10) | 0.0004 (11) |
| C11 | 0.0283 (13) | 0.0429 (16) | 0.0251 (11) | 0.0016 (13) | 0.0067 (9) | −0.0028 (12) |
| C12 | 0.0304 (13) | 0.0340 (14) | 0.0248 (11) | 0.0024 (13) | 0.0079 (9) | −0.0028 (12) |
| C13 | 0.0270 (13) | 0.0370 (15) | 0.0262 (11) | 0.0028 (12) | 0.0087 (9) | −0.0019 (11) |
| C14 | 0.0250 (12) | 0.0309 (13) | 0.0230 (10) | 0.0014 (12) | 0.0059 (9) | −0.0019 (12) |
| C15 | 0.0381 (15) | 0.068 (2) | 0.0225 (11) | 0.0052 (17) | 0.0028 (10) | −0.0018 (15) |
| C16 | 0.0368 (15) | 0.0555 (17) | 0.0279 (12) | 0.0023 (15) | 0.0019 (10) | −0.0011 (14) |
| O1—C1 | 1.293 (3) | C5—C6 | 1.421 (3) |
| O1—H1A | 0.8501 | C5—C14 | 1.423 (3) |
| O2—C2 | 1.344 (3) | C6—C7 | 1.454 (3) |
| O2—C15 | 1.447 (3) | C7—C12 | 1.368 (4) |
| O3—C4 | 1.294 (3) | C7—C8 | 1.527 (3) |
| O3—H3A | 0.8350 | C8—C9 | 1.524 (4) |
| O4—C6 | 1.304 (3) | C8—H8 | 0.9800 |
| O4—H4A | 0.9046 | C9—C10 | 1.523 (4) |
| O5—C8 | 1.415 (4) | C9—H9 | 0.9800 |
| O5—H5A | 0.9154 | C10—C16 | 1.525 (3) |
| O6—C9 | 1.427 (3) | C10—C11 | 1.530 (3) |
| O6—H6A | 0.9667 | C11—C12 | 1.501 (3) |
| O7—C10 | 1.444 (3) | C11—H11A | 0.9700 |
| O7—H7A | 0.9012 | C11—H11B | 0.9700 |
| O8—C13 | 1.296 (3) | C12—C13 | 1.448 (3) |
| O8—H8A | 0.9624 | C13—C14 | 1.422 (3) |
| C1—C14 | 1.417 (3) | C15—H15A | 0.9600 |
| C1—C2 | 1.458 (3) | C15—H15B | 0.9600 |
| C2—C3 | 1.364 (4) | C15—H15C | 0.9600 |
| C3—C4 | 1.424 (3) | C16—H16A | 0.9600 |
| C3—H3 | 0.9300 | C16—H16B | 0.9600 |
| C4—C5 | 1.431 (3) | C16—H16C | 0.9600 |
| C1—O1—H1A | 112.1 | C10—C9—C8 | 111.2 (2) |
| C2—O2—C15 | 118.3 (2) | O6—C9—H9 | 108.9 |
| C4—O3—H3A | 108.7 | C10—C9—H9 | 108.9 |
| C6—O4—H4A | 110.2 | C8—C9—H9 | 108.9 |
| C8—O5—H5A | 99.7 | O7—C10—C9 | 106.3 (2) |
| C9—O6—H6A | 106.8 | O7—C10—C16 | 109.9 (2) |
| C10—O7—H7A | 110.5 | C9—C10—C16 | 111.6 (2) |
| C13—O8—H8A | 106.3 | O7—C10—C11 | 110.9 (2) |
| O1—C1—C14 | 123.4 (2) | C9—C10—C11 | 108.4 (2) |
| O1—C1—C2 | 117.6 (2) | C16—C10—C11 | 109.7 (2) |
| C14—C1—C2 | 119.0 (2) | C12—C11—C10 | 113.5 (2) |
| O2—C2—C3 | 127.1 (2) | C12—C11—H11A | 108.9 |
| O2—C2—C1 | 112.4 (2) | C10—C11—H11A | 108.9 |
| C3—C2—C1 | 120.4 (2) | C12—C11—H11B | 108.9 |
| C2—C3—C4 | 120.9 (2) | C10—C11—H11B | 108.9 |
| C2—C3—H3 | 119.5 | H11A—C11—H11B | 107.7 |
| C4—C3—H3 | 119.5 | C7—C12—C13 | 120.6 (2) |
| O3—C4—C3 | 118.4 (2) | C7—C12—C11 | 122.6 (2) |
| O3—C4—C5 | 121.4 (2) | C13—C12—C11 | 116.7 (2) |
| C3—C4—C5 | 120.2 (2) | O8—C13—C14 | 121.8 (2) |
| C6—C5—C14 | 119.9 (2) | O8—C13—C12 | 118.2 (2) |
| C6—C5—C4 | 121.1 (2) | C14—C13—C12 | 120.1 (2) |
| C14—C5—C4 | 119.0 (2) | C1—C14—C13 | 120.0 (2) |
| O4—C6—C5 | 121.3 (2) | C1—C14—C5 | 120.5 (2) |
| O4—C6—C7 | 118.7 (2) | C13—C14—C5 | 119.5 (2) |
| C5—C6—C7 | 120.0 (2) | O2—C15—H15A | 109.5 |
| C12—C7—C6 | 119.9 (2) | O2—C15—H15B | 109.5 |
| C12—C7—C8 | 120.9 (2) | H15A—C15—H15B | 109.5 |
| C6—C7—C8 | 119.0 (2) | O2—C15—H15C | 109.5 |
| O5—C8—C9 | 106.9 (2) | H15A—C15—H15C | 109.5 |
| O5—C8—C7 | 113.5 (2) | H15B—C15—H15C | 109.5 |
| C9—C8—C7 | 112.6 (2) | C10—C16—H16A | 109.5 |
| O5—C8—H8 | 107.8 | C10—C16—H16B | 109.5 |
| C9—C8—H8 | 107.8 | H16A—C16—H16B | 109.5 |
| C7—C8—H8 | 107.8 | C10—C16—H16C | 109.5 |
| O6—C9—C10 | 112.1 (2) | H16A—C16—H16C | 109.5 |
| O6—C9—C8 | 106.7 (2) | H16B—C16—H16C | 109.5 |
| H··· | ||||
| O1—H1A···O3i | 0.85 | 2.55 | 3.229 (3) | 137 |
| O3—H3A···O8ii | 0.84 | 2.40 | 2.808 (3) | 111 |
| O4—H4A···O8ii | 0.90 | 2.54 | 3.223 (3) | 132 |
| O5—H5A···O4 | 0.92 | 1.85 | 2.687 (3) | 152 |
| O6—H6A···O7iii | 0.97 | 1.92 | 2.821 (3) | 154 |
| O7—H7A···O1iv | 0.90 | 2.11 | 2.966 (3) | 159 |
| O7—H7A···O2iv | 0.90 | 2.40 | 3.066 (3) | 131 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.85 | 2.55 | 3.229 (3) | 137 |
| O3—H3 | 0.84 | 2.40 | 2.808 (3) | 111 |
| O4—H4 | 0.90 | 2.54 | 3.223 (3) | 132 |
| O5—H5 | 0.92 | 1.85 | 2.687 (3) | 152 |
| O6—H6 | 0.97 | 1.92 | 2.821 (3) | 154 |
| O7—H7 | 0.90 | 2.11 | 2.966 (3) | 159 |
| O7—H7 | 0.90 | 2.40 | 3.066 (3) | 131 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .