Literature DB >> 21581080

1-[6-(Hydroxy-meth-yl)-2-pyrid-yl]-3-(2,4,6-trimethyl-benz-yl)-1H-imidazol-3-ium bromide.

Chuang Zhou1, Xiang-Ge Zhou, Yu-Ping Qiu, Mei-Ming Luo.   

Abstract

In the title compound, C(19)H(22)N(3)O(+)·Br(-), the imidazole ring is approximately coplanar with the pyridine ring [dihedral angle = 0.88 (13)°] and nearly perpendicular to the benzene ring [dihedral angle = 81.70 (13)°]. O-H⋯Br and C-H⋯Br hydrogen bonding helps to stabilize the crystal structure.

Entities:  

Year:  2008        PMID: 21581080      PMCID: PMC2959624          DOI: 10.1107/S1600536808034764

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Liddle et al. (2007 ▶); Ren et al. (2007 ▶); Arnold & Wilson (2007 ▶); Chianese & Crabtree (2005 ▶); Dyson et al. (2008 ▶); Patel et al. (2006 ▶). For synthesis, see: Hosseinzadeh et al. (2006 ▶).

Experimental

Crystal data

C19H22N3OBr M = 388.31 Monoclinic, a = 11.2315 (3) Å b = 11.5390 (3) Å c = 14.3673 (4) Å β = 100.833 (2)° V = 1828.82 (9) Å3 Z = 4 Mo Kα radiation μ = 2.26 mm−1 T = 296 (2) K 0.50 × 0.48 × 0.40 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.320, T max = 0.405 13818 measured reflections 4184 independent reflections 2287 reflections with I > 2σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.116 S = 1.01 4184 reflections 220 parameters H-atom parameters constrained Δρmax = 0.41 e Å−3 Δρmin = −0.60 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808034764/xu2459sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808034764/xu2459Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H22N3O+·BrF(000) = 800
Mr = 388.31Dx = 1.410 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3980 reflections
a = 11.2315 (3) Åθ = 2.8–26.7°
b = 11.5390 (3) ŵ = 2.26 mm1
c = 14.3673 (4) ÅT = 296 K
β = 100.833 (2)°Block, colourless
V = 1828.82 (9) Å30.50 × 0.48 × 0.40 mm
Z = 4
Bruker SAMRT CCD area-detector diffractometer4184 independent reflections
Radiation source: fine-focus sealed tube2287 reflections with I > 2σ(I)
graphiteRint = 0.048
φ and ω scansθmax = 27.5°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −14→14
Tmin = 0.320, Tmax = 0.405k = −13→14
13818 measured reflectionsl = −17→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.116H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.05P)2 + 0.57P] where P = (Fo2 + 2Fc2)/3
4184 reflections(Δ/σ)max < 0.001
220 parametersΔρmax = 0.41 e Å3
0 restraintsΔρmin = −0.60 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br1−0.28302 (3)0.00291 (3)−0.05646 (2)0.05606 (10)
O1−0.21350 (16)0.2315 (2)0.07160 (15)0.0662 (7)
H1A−0.24780.19200.02710.099*
N10.09397 (17)0.27426 (17)0.18365 (14)0.0321 (5)
N20.28135 (17)0.30337 (16)0.27893 (14)0.0305 (5)
N30.44633 (17)0.20953 (17)0.27441 (14)0.0334 (5)
C10.1546 (2)0.3348 (2)0.25443 (17)0.0316 (6)
C20.1075 (2)0.4190 (2)0.3045 (2)0.0445 (8)
H2A0.15470.45740.35530.053*
C3−0.0135 (3)0.4434 (3)0.2752 (2)0.0531 (9)
H3A−0.05070.49890.30680.064*
C4−0.0795 (2)0.3852 (2)0.1986 (2)0.0444 (8)
H4A−0.16060.40340.17640.053*
C5−0.0234 (2)0.2998 (2)0.15572 (18)0.0356 (7)
C6−0.0886 (2)0.2276 (2)0.0752 (2)0.0445 (8)
H6A−0.07030.25630.01600.053*
H6B−0.06080.14800.08320.053*
C70.3316 (2)0.2205 (2)0.23424 (18)0.0346 (6)
H7A0.29190.17750.18300.042*
C80.3694 (2)0.3481 (2)0.34984 (18)0.0380 (7)
H8A0.35980.40750.39160.046*
C90.4719 (2)0.2892 (2)0.34690 (18)0.0384 (7)
H9A0.54660.30020.38660.046*
C100.5327 (2)0.1277 (2)0.24373 (18)0.0376 (7)
H10A0.58770.17070.21210.045*
H10B0.48800.07400.19820.045*
C110.6055 (2)0.0601 (2)0.32432 (17)0.0312 (6)
C120.7292 (2)0.0816 (2)0.35423 (17)0.0320 (6)
C130.7950 (2)0.0118 (2)0.42336 (17)0.0339 (6)
H13A0.87750.02610.44270.041*
C140.7435 (2)−0.0781 (2)0.46487 (18)0.0368 (7)
C150.6197 (2)−0.0969 (2)0.43645 (18)0.0370 (7)
H15A0.5830−0.15630.46450.044*
C160.5498 (2)−0.0293 (2)0.36734 (18)0.0336 (7)
C170.4158 (2)−0.0533 (3)0.3403 (2)0.0470 (8)
H17A0.3971−0.12410.36960.070*
H17B0.3935−0.06040.27270.070*
H17C0.37130.00940.36150.070*
C180.7936 (2)0.1776 (2)0.3128 (2)0.0466 (8)
H18A0.87920.17210.33670.070*
H18B0.76430.25110.33030.070*
H18C0.77830.17080.24500.070*
C190.8180 (3)−0.1551 (3)0.5387 (2)0.0521 (8)
H19A0.9026−0.13850.54230.078*
H19B0.8026−0.23480.52150.078*
H19C0.7963−0.14080.59920.078*
U11U22U33U12U13U23
Br10.0685 (2)0.04819 (17)0.04329 (16)−0.00279 (17)−0.01057 (14)−0.00348 (15)
O10.0395 (11)0.0820 (15)0.0724 (15)−0.0069 (11)−0.0020 (11)−0.0294 (12)
N10.0311 (11)0.0305 (11)0.0330 (12)−0.0008 (9)0.0022 (9)0.0017 (9)
N20.0304 (11)0.0302 (11)0.0296 (11)0.0007 (9)0.0021 (9)0.0001 (9)
N30.0290 (11)0.0338 (11)0.0346 (12)0.0002 (9)−0.0014 (9)0.0000 (9)
C10.0312 (13)0.0309 (13)0.0324 (14)0.0006 (11)0.0049 (11)0.0053 (11)
C20.0388 (15)0.0424 (15)0.0495 (17)0.0016 (13)0.0011 (13)−0.0122 (13)
C30.0433 (17)0.0473 (16)0.068 (2)0.0062 (14)0.0089 (15)−0.0158 (16)
C40.0314 (14)0.0379 (15)0.0611 (19)0.0021 (12)0.0015 (13)−0.0063 (14)
C50.0373 (14)0.0316 (13)0.0365 (15)−0.0057 (11)0.0031 (12)0.0074 (11)
C60.0367 (15)0.0509 (17)0.0420 (16)−0.0047 (13)−0.0029 (13)−0.0032 (14)
C70.0336 (14)0.0359 (14)0.0319 (14)−0.0010 (12)−0.0001 (11)−0.0012 (12)
C80.0393 (14)0.0377 (14)0.0341 (15)−0.0042 (12)0.0000 (12)−0.0040 (12)
C90.0355 (14)0.0402 (15)0.0360 (15)−0.0055 (12)−0.0023 (12)−0.0051 (12)
C100.0335 (14)0.0437 (15)0.0342 (15)0.0039 (12)0.0030 (12)−0.0027 (12)
C110.0303 (13)0.0309 (13)0.0317 (14)0.0014 (11)0.0042 (11)−0.0022 (11)
C120.0311 (13)0.0320 (13)0.0336 (14)−0.0019 (11)0.0077 (11)−0.0022 (11)
C130.0246 (12)0.0404 (15)0.0356 (13)−0.0004 (12)0.0031 (10)−0.0022 (12)
C140.0416 (15)0.0386 (14)0.0306 (14)0.0082 (12)0.0073 (12)0.0002 (12)
C150.0408 (14)0.0341 (14)0.0383 (15)−0.0060 (12)0.0131 (12)0.0037 (12)
C160.0325 (13)0.0332 (14)0.0359 (14)−0.0008 (11)0.0087 (11)−0.0080 (11)
C170.0353 (15)0.0474 (16)0.0582 (19)−0.0060 (13)0.0088 (14)−0.0031 (15)
C180.0364 (15)0.0491 (17)0.0519 (18)−0.0067 (13)0.0018 (13)0.0090 (14)
C190.0507 (17)0.0587 (18)0.0465 (18)0.0092 (15)0.0079 (14)0.0163 (15)
O1—C61.394 (3)C10—C111.504 (3)
O1—H1A0.8200C10—H10A0.9700
N1—C11.314 (3)C10—H10B0.9700
N1—C51.336 (3)C11—C121.398 (3)
N2—C71.335 (3)C11—C161.408 (4)
N2—C81.380 (3)C12—C131.380 (3)
N2—C11.447 (3)C12—C181.505 (4)
N3—C71.315 (3)C13—C141.377 (4)
N3—C91.378 (3)C13—H13A0.9300
N3—C101.479 (3)C14—C151.390 (3)
C1—C21.372 (4)C14—C191.510 (4)
C2—C31.373 (4)C15—C161.385 (3)
C2—H2A0.9300C15—H15A0.9300
C3—C41.380 (4)C16—C171.509 (3)
C3—H3A0.9300C17—H17A0.9600
C4—C51.377 (4)C17—H17B0.9600
C4—H4A0.9300C17—H17C0.9600
C5—C61.500 (3)C18—H18A0.9600
C6—H6A0.9700C18—H18B0.9600
C6—H6B0.9700C18—H18C0.9600
C7—H7A0.9300C19—H19A0.9600
C8—C91.344 (3)C19—H19B0.9600
C8—H8A0.9300C19—H19C0.9600
C9—H9A0.9300
C6—O1—H1A109.5C11—C10—H10A108.9
C1—N1—C5117.0 (2)N3—C10—H10B108.9
C7—N2—C8108.3 (2)C11—C10—H10B108.9
C7—N2—C1123.3 (2)H10A—C10—H10B107.8
C8—N2—C1128.4 (2)C12—C11—C16119.5 (2)
C7—N3—C9108.4 (2)C12—C11—C10120.7 (2)
C7—N3—C10125.0 (2)C16—C11—C10119.8 (2)
C9—N3—C10126.6 (2)C13—C12—C11119.0 (2)
N1—C1—C2126.0 (2)C13—C12—C18118.8 (2)
N1—C1—N2113.4 (2)C11—C12—C18122.2 (2)
C2—C1—N2120.6 (2)C14—C13—C12122.6 (2)
C1—C2—C3116.2 (2)C14—C13—H13A118.7
C1—C2—H2A121.9C12—C13—H13A118.7
C3—C2—H2A121.9C13—C14—C15117.9 (2)
C2—C3—C4119.8 (3)C13—C14—C19121.6 (2)
C2—C3—H3A120.1C15—C14—C19120.4 (2)
C4—C3—H3A120.1C16—C15—C14121.5 (2)
C5—C4—C3118.8 (3)C16—C15—H15A119.2
C5—C4—H4A120.6C14—C15—H15A119.2
C3—C4—H4A120.6C15—C16—C11119.3 (2)
N1—C5—C4122.1 (2)C15—C16—C17119.0 (2)
N1—C5—C6114.9 (2)C11—C16—C17121.7 (2)
C4—C5—C6123.0 (2)C16—C17—H17A109.5
O1—C6—C5110.7 (2)C16—C17—H17B109.5
O1—C6—H6A109.5H17A—C17—H17B109.5
C5—C6—H6A109.5C16—C17—H17C109.5
O1—C6—H6B109.5H17A—C17—H17C109.5
C5—C6—H6B109.5H17B—C17—H17C109.5
H6A—C6—H6B108.1C12—C18—H18A109.5
N3—C7—N2109.0 (2)C12—C18—H18B109.5
N3—C7—H7A125.5H18A—C18—H18B109.5
N2—C7—H7A125.5C12—C18—H18C109.5
C9—C8—N2106.7 (2)H18A—C18—H18C109.5
C9—C8—H8A126.7H18B—C18—H18C109.5
N2—C8—H8A126.7C14—C19—H19A109.5
C8—C9—N3107.6 (2)C14—C19—H19B109.5
C8—C9—H9A126.2H19A—C19—H19B109.5
N3—C9—H9A126.2C14—C19—H19C109.5
N3—C10—C11113.2 (2)H19A—C19—H19C109.5
N3—C10—H10A108.9H19B—C19—H19C109.5
C5—N1—C1—C22.5 (4)C7—N3—C9—C80.4 (3)
C5—N1—C1—N2−178.8 (2)C10—N3—C9—C8178.4 (2)
C7—N2—C1—N1−0.3 (3)C7—N3—C10—C11−132.4 (2)
C8—N2—C1—N1−179.0 (2)C9—N3—C10—C1149.8 (3)
C7—N2—C1—C2178.5 (2)N3—C10—C11—C12−109.5 (3)
C8—N2—C1—C2−0.2 (4)N3—C10—C11—C1673.4 (3)
N1—C1—C2—C3−2.0 (4)C16—C11—C12—C132.1 (4)
N2—C1—C2—C3179.4 (2)C10—C11—C12—C13−175.0 (2)
C1—C2—C3—C4−0.8 (4)C16—C11—C12—C18−178.5 (2)
C2—C3—C4—C52.8 (4)C10—C11—C12—C184.4 (4)
C1—N1—C5—C4−0.2 (4)C11—C12—C13—C14−0.5 (4)
C1—N1—C5—C6−179.6 (2)C18—C12—C13—C14−179.8 (2)
C3—C4—C5—N1−2.4 (4)C12—C13—C14—C15−1.2 (4)
C3—C4—C5—C6177.0 (3)C12—C13—C14—C19178.5 (2)
N1—C5—C6—O1160.1 (2)C13—C14—C15—C161.2 (4)
C4—C5—C6—O1−19.3 (4)C19—C14—C15—C16−178.5 (3)
C9—N3—C7—N2−0.9 (3)C14—C15—C16—C110.4 (4)
C10—N3—C7—N2−179.0 (2)C14—C15—C16—C17−179.4 (2)
C8—N2—C7—N31.0 (3)C12—C11—C16—C15−2.1 (4)
C1—N2—C7—N3−177.9 (2)C10—C11—C16—C15175.0 (2)
C7—N2—C8—C9−0.8 (3)C12—C11—C16—C17177.7 (2)
C1—N2—C8—C9178.1 (2)C10—C11—C16—C17−5.2 (4)
N2—C8—C9—N30.2 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1A···Br10.822.493.227 (2)151
C7—H7A···Br1i0.932.753.598 (2)152
C8—H8A···Br1ii0.932.893.745 (2)154
C10—H10B···Br1i0.972.913.813 (2)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1A⋯Br10.822.493.227 (2)151
C7—H7A⋯Br1i0.932.753.598 (2)152
C8—H8A⋯Br1ii0.932.893.745 (2)154
C10—H10B⋯Br1i0.972.913.813 (2)155

Symmetry codes: (i) ; (ii) .

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Authors:  Dipti Patel; Stephen T Liddle; Shaheed A Mungur; Mark Rodden; Alexander J Blake; Polly L Arnold
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