Literature DB >> 21581076

tert-Butyl N-benzyl-N-[4-(4-fluoro-benzoyl-meth-yl)-2-pyrid-yl]carbamate.

Pierre Koch, Dieter Schollmeyer, Stefan Laufer.   

Abstract

In the crystal structure of the title compound, C(25)H(25)FN(2)O(3), the pyridine ring makes dihedral angles of 75.1 (3), 39.4 (3) and 74.6 (3)° with the phenyl ring, the carbamate plane and the 4-fluoro-phenyl ring, respectively. The phenyl ring makes dihedral angles of 77.2 (3) and 23.6 (3)° with the carbamate plane and the 4-fluoro-phenyl ring, respectively. The 4-fluoro-phenyl ring is perpendicular to the carbamate plane, the dihedral angle between them being 89.5 (3)°.

Entities:  

Year:  2008        PMID: 21581076      PMCID: PMC2959675          DOI: 10.1107/S160053680803448X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For preparation of the title compound, see: Koch et al. (2008a ▶). For applications of the vicinal 4-fluoro­phen­yl/pyridin-4-yl pharmacophore in p38 MAP kinase inhibitors, see, for example: Koch et al. (2008a ▶); for thia­zolopyridines, see: Miwatashi et al. (2005 ▶); for pyrazolopyridines, see: Stevens et al. (2005 ▶). For a related structure, see: Koch, et al. (2008b ▶).

Experimental

Crystal data

C25H25FN2O3 M = 420.47 Monoclinic, a = 38.054 (7) Å b = 7.9320 (6) Å c = 14.589 (3) Å β = 102.142 (8)° V = 4305.1 (11) Å3 Z = 8 Cu Kα radiation μ = 0.75 mm−1 T = 193 (2) K 0.35 × 0.30 × 0.18 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: none 4272 measured reflections 4091 independent reflections 2192 reflections with I > 2σ(I) R int = 0.076 3 standard reflections frequency: 60 min intensity decay: 3%

Refinement

R[F 2 > 2σ(F 2)] = 0.110 wR(F 2) = 0.339 S = 1.10 4091 reflections 283 parameters H-atom parameters constrained Δρmax = 0.48 e Å−3 Δρmin = −0.64 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: CORINC (Dräger & Gattow, 1971 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680803448X/si2118sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680803448X/si2118Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H25FN2O3F(000) = 1776
Mr = 420.47Dx = 1.297 Mg m3
Monoclinic, C2/cCu Kα radiation, λ = 1.54178 Å
Hall symbol: -C 2ycCell parameters from 25 reflections
a = 38.054 (7) Åθ = 15–28°
b = 7.9320 (6) ŵ = 0.75 mm1
c = 14.589 (3) ÅT = 193 K
β = 102.142 (8)°Plate, colourless
V = 4305.1 (11) Å30.35 × 0.30 × 0.18 mm
Z = 8
Enraf–Nonius CAD-4 diffractometerRint = 0.076
Radiation source: rotating anodeθmax = 70.1°, θmin = 2.4°
graphiteh = −46→45
ω/2θ scansk = −9→0
4272 measured reflectionsl = 0→17
4091 independent reflections3 standard reflections every 60 min
2192 reflections with I > 2σ(I) intensity decay: 3%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.110Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.339H-atom parameters constrained
S = 1.10w = 1/[σ2(Fo2) + (0.182P)2] where P = (Fo2 + 2Fc2)/3
4091 reflections(Δ/σ)max < 0.001
283 parametersΔρmax = 0.48 e Å3
0 restraintsΔρmin = −0.64 e Å3
Experimental. No absorption correction was applied because of irregular crystal shape and low crystal quality. The crystal diffracted only very weak (less the 55% observed reflections).
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.30976 (15)0.4803 (7)0.3672 (4)0.0242 (12)
C20.33725 (17)0.5800 (8)0.4143 (4)0.0324 (14)
H20.36120.53830.42690.039*
C30.33038 (19)0.7421 (8)0.4438 (5)0.0406 (16)
H30.34950.80940.47730.049*
C40.2957 (2)0.8035 (9)0.4240 (5)0.0422 (17)
H40.29090.91370.44370.051*
C50.26812 (18)0.7057 (9)0.3759 (4)0.0386 (16)
H50.24430.74860.36190.046*
C60.27507 (16)0.5439 (8)0.3476 (4)0.0297 (13)
H60.25590.47640.31460.036*
C70.31548 (15)0.3018 (8)0.3346 (4)0.0265 (13)
H7A0.29450.23250.34060.032*
H7B0.31630.30580.26720.032*
N80.34806 (12)0.2177 (6)0.3852 (3)0.0273 (11)
C90.37651 (15)0.1822 (7)0.3379 (4)0.0241 (12)
N100.38074 (14)0.3047 (6)0.2779 (3)0.0326 (12)
C110.40604 (19)0.2738 (9)0.2270 (5)0.0440 (18)
H110.40970.35820.18380.053*
C120.42649 (17)0.1328 (9)0.2326 (4)0.0389 (16)
H120.44330.11780.19340.047*
C130.42200 (15)0.0098 (8)0.2982 (4)0.0268 (13)
C140.39684 (15)0.0377 (7)0.3519 (4)0.0240 (12)
H140.3936−0.04180.39810.029*
C150.44316 (16)−0.1512 (8)0.3080 (4)0.0297 (13)
H15A0.4419−0.19960.24480.036*
H15B0.4319−0.23280.34430.036*
C160.48232 (17)−0.1287 (8)0.3558 (5)0.0341 (15)
O170.49559 (13)0.0077 (6)0.3700 (5)0.0666 (18)
C180.50420 (15)−0.2837 (8)0.3851 (4)0.0268 (13)
C190.49111 (16)−0.4454 (8)0.3620 (4)0.0279 (13)
H190.4676−0.45970.32490.034*
C200.51188 (18)−0.5852 (8)0.3923 (4)0.0337 (15)
H200.5030−0.69570.37660.040*
C210.54570 (18)−0.5608 (8)0.4458 (4)0.0332 (14)
C220.55982 (19)−0.4035 (9)0.4691 (5)0.0413 (17)
H220.5835−0.39070.50540.050*
C230.53868 (16)−0.2635 (8)0.4385 (4)0.0325 (14)
H230.5479−0.15350.45410.039*
F240.56589 (11)−0.6962 (5)0.4773 (3)0.0487 (11)
C250.35189 (15)0.1753 (7)0.4796 (3)0.0213 (12)
O260.37827 (11)0.1119 (5)0.5264 (3)0.0299 (10)
O270.32169 (10)0.2188 (5)0.5079 (2)0.0260 (9)
C280.32262 (16)0.2339 (8)0.6097 (3)0.0307 (14)
C290.32429 (19)0.0591 (10)0.6534 (4)0.0440 (18)
H29A0.3033−0.00630.62270.066*
H29B0.32450.06930.72040.066*
H29C0.34620.00180.64510.066*
C300.3536 (2)0.3456 (11)0.6559 (5)0.053 (2)
H30A0.37630.29530.64820.080*
H30B0.35370.35660.72280.080*
H30C0.35090.45730.62650.080*
C310.28696 (18)0.3212 (10)0.6091 (4)0.0443 (18)
H31A0.28610.42840.57520.066*
H31B0.28470.34280.67370.066*
H31C0.26720.24880.57790.066*
U11U22U33U12U13U23
C10.032 (3)0.026 (3)0.018 (3)−0.006 (2)0.012 (2)0.000 (2)
C20.034 (3)0.027 (3)0.039 (3)−0.003 (3)0.014 (3)0.006 (3)
C30.052 (4)0.029 (4)0.042 (4)−0.015 (3)0.013 (3)−0.005 (3)
C40.061 (5)0.028 (4)0.042 (4)0.010 (3)0.021 (3)−0.005 (3)
C50.039 (4)0.045 (4)0.034 (3)0.010 (3)0.014 (3)0.005 (3)
C60.035 (3)0.033 (3)0.023 (3)0.004 (3)0.009 (2)0.002 (3)
C70.031 (3)0.036 (3)0.013 (2)0.002 (3)0.006 (2)−0.001 (2)
N80.029 (3)0.037 (3)0.018 (2)0.003 (2)0.0098 (19)0.002 (2)
C90.027 (3)0.027 (3)0.019 (2)−0.002 (2)0.006 (2)0.002 (2)
N100.044 (3)0.029 (3)0.027 (3)0.007 (2)0.015 (2)0.009 (2)
C110.054 (4)0.046 (4)0.040 (4)0.013 (3)0.031 (3)0.021 (3)
C120.042 (4)0.049 (4)0.035 (3)0.012 (3)0.028 (3)0.011 (3)
C130.029 (3)0.029 (3)0.022 (3)−0.001 (3)0.005 (2)−0.003 (2)
C140.032 (3)0.025 (3)0.015 (2)−0.003 (2)0.006 (2)0.001 (2)
C150.037 (3)0.030 (3)0.026 (3)0.003 (3)0.015 (2)0.000 (3)
C160.036 (3)0.028 (3)0.040 (3)0.000 (3)0.011 (3)0.012 (3)
O170.042 (3)0.028 (3)0.118 (5)−0.006 (2)−0.011 (3)0.009 (3)
C180.027 (3)0.030 (3)0.027 (3)−0.001 (2)0.013 (2)0.003 (3)
C190.031 (3)0.032 (3)0.023 (3)0.000 (3)0.011 (2)−0.004 (3)
C200.051 (4)0.022 (3)0.033 (3)0.002 (3)0.020 (3)−0.001 (3)
C210.042 (4)0.035 (4)0.026 (3)0.014 (3)0.016 (3)0.004 (3)
C220.035 (4)0.050 (5)0.039 (4)0.006 (3)0.008 (3)0.009 (3)
C230.037 (3)0.030 (3)0.033 (3)−0.001 (3)0.013 (3)0.005 (3)
F240.062 (3)0.040 (2)0.045 (2)0.022 (2)0.015 (2)0.0098 (19)
C250.031 (3)0.021 (3)0.014 (2)−0.007 (2)0.008 (2)−0.004 (2)
O260.032 (2)0.040 (3)0.0165 (19)0.0031 (19)0.0030 (16)0.0027 (18)
O270.033 (2)0.032 (2)0.0157 (18)−0.0009 (18)0.0114 (16)−0.0026 (17)
C280.042 (3)0.043 (4)0.009 (2)−0.005 (3)0.011 (2)−0.007 (2)
C290.042 (4)0.070 (5)0.022 (3)−0.001 (4)0.010 (3)0.013 (3)
C300.055 (5)0.071 (6)0.035 (4)−0.017 (4)0.012 (3)−0.023 (4)
C310.053 (4)0.059 (5)0.025 (3)0.002 (4)0.019 (3)−0.003 (3)
C1—C21.374 (8)O27—C281.484 (6)
C1—C61.385 (8)C28—C301.515 (9)
C1—C71.525 (8)C28—C291.521 (9)
C2—C31.398 (9)C28—C311.522 (9)
C3—C41.378 (10)C2—H20.9500
C4—C51.375 (10)C3—H30.9500
C5—C61.391 (9)C4—H40.9500
C7—N81.464 (7)C5—H50.9500
N8—C251.396 (6)C6—H60.9500
N8—C91.429 (7)C7—H7A0.9900
C9—N101.340 (7)C7—H7B0.9900
C9—C141.374 (8)C11—H110.9500
N10—C111.356 (7)C12—H120.9500
C11—C121.355 (9)C14—H140.9500
C12—C131.403 (8)C15—H15A0.9900
C13—C141.376 (7)C15—H15B0.9900
C13—C151.500 (8)C19—H190.9500
C15—C161.517 (9)C20—H200.9500
C16—O171.194 (8)C22—H220.9500
C16—C181.496 (8)C23—H230.9500
C18—C231.387 (8)C29—H29A0.9800
C18—C191.391 (8)C29—H29B0.9800
C19—C201.380 (8)C29—H29C0.9800
C20—C211.371 (9)C30—H30A0.9800
C21—F241.344 (7)C30—H30B0.9800
C21—C221.373 (10)C30—H30C0.9800
C22—C231.389 (9)C31—H31A0.9800
C25—O261.199 (7)C31—H31B0.9800
C25—O271.345 (6)C31—H31C0.9800
C2—C1—C6119.1 (6)C4—C3—H3120.00
C2—C1—C7123.2 (5)C3—C4—H4120.00
C6—C1—C7117.8 (5)C5—C4—H4120.00
C1—C2—C3120.7 (6)C4—C5—H5120.00
C4—C3—C2119.6 (6)C6—C5—H5120.00
C5—C4—C3120.2 (6)C1—C6—H6120.00
C4—C5—C6120.0 (6)C5—C6—H6120.00
C1—C6—C5120.5 (6)N8—C7—H7A108.00
N8—C7—C1115.3 (5)N8—C7—H7B108.00
C25—N8—C9119.8 (5)C1—C7—H7A109.00
C25—N8—C7120.7 (4)C1—C7—H7B108.00
C9—N8—C7119.5 (4)H7A—C7—H7B107.00
N10—C9—C14124.1 (5)N10—C11—H11117.00
N10—C9—N8112.3 (5)C12—C11—H11117.00
C14—C9—N8123.5 (5)C11—C12—H12121.00
C9—N10—C11115.0 (5)C13—C12—H12121.00
C12—C11—N10125.5 (6)C9—C14—H14120.00
C11—C12—C13117.7 (5)C13—C14—H14120.00
C14—C13—C12118.4 (5)C13—C15—H15A109.00
C14—C13—C15120.5 (5)C13—C15—H15B109.00
C12—C13—C15121.1 (5)C16—C15—H15A109.00
C9—C14—C13119.1 (5)C16—C15—H15B109.00
C13—C15—C16113.6 (5)H15A—C15—H15B108.00
O17—C16—C18120.4 (6)C18—C19—H19120.00
O17—C16—C15121.7 (6)C20—C19—H19120.00
C18—C16—C15118.0 (5)C19—C20—H20121.00
C23—C18—C19119.4 (6)C21—C20—H20121.00
C23—C18—C16118.0 (6)C21—C22—H22121.00
C19—C18—C16122.6 (5)C23—C22—H22121.00
C20—C19—C18120.8 (6)C18—C23—H23120.00
C21—C20—C19118.4 (6)C22—C23—H23120.00
F24—C21—C20118.9 (6)C28—C29—H29A109.00
F24—C21—C22118.4 (6)C28—C29—H29B109.00
C20—C21—C22122.7 (6)C28—C29—H29C109.00
C21—C22—C23118.5 (6)H29A—C29—H29B110.00
C18—C23—C22120.3 (6)H29A—C29—H29C109.00
O26—C25—O27126.9 (5)H29B—C29—H29C109.00
O26—C25—N8124.3 (5)C28—C30—H30A109.00
O27—C25—N8108.8 (5)C28—C30—H30B110.00
C25—O27—C28119.0 (4)C28—C30—H30C109.00
O27—C28—C30110.2 (5)H30A—C30—H30B109.00
O27—C28—C29109.6 (5)H30A—C30—H30C109.00
C30—C28—C29112.8 (6)H30B—C30—H30C109.00
O27—C28—C31101.4 (5)C28—C31—H31A109.00
C30—C28—C31110.2 (6)C28—C31—H31B109.00
C29—C28—C31112.1 (5)C28—C31—H31C109.00
C1—C2—H2120.00H31A—C31—H31B109.00
C3—C2—H2120.00H31A—C31—H31C109.00
C2—C3—H3120.00H31B—C31—H31C110.00
C6—C1—C2—C31.3 (8)C12—C13—C15—C1673.5 (7)
C7—C1—C2—C3−179.1 (5)C13—C15—C16—O17−11.2 (9)
C1—C2—C3—C4−1.1 (9)C13—C15—C16—C18168.9 (5)
C2—C3—C4—C50.2 (10)O17—C16—C18—C237.5 (9)
C3—C4—C5—C60.5 (10)C15—C16—C18—C23−172.6 (5)
C2—C1—C6—C5−0.6 (8)O17—C16—C18—C19−173.4 (7)
C7—C1—C6—C5179.8 (5)C15—C16—C18—C196.5 (8)
C4—C5—C6—C1−0.3 (9)C23—C18—C19—C200.6 (8)
C2—C1—C7—N822.7 (7)C16—C18—C19—C20−178.4 (5)
C6—C1—C7—N8−157.7 (5)C18—C19—C20—C210.0 (8)
C1—C7—N8—C2566.5 (7)C19—C20—C21—F24178.7 (5)
C1—C7—N8—C9−112.1 (5)C19—C20—C21—C22−0.9 (9)
C25—N8—C9—N10−141.6 (5)F24—C21—C22—C23−178.5 (5)
C7—N8—C9—N1037.1 (7)C20—C21—C22—C231.1 (10)
C25—N8—C9—C1439.1 (8)C19—C18—C23—C22−0.5 (9)
C7—N8—C9—C14−142.3 (6)C16—C18—C23—C22178.6 (6)
C14—C9—N10—C112.8 (9)C21—C22—C23—C18−0.4 (9)
N8—C9—N10—C11−176.5 (6)C9—N8—C25—O261.4 (9)
C9—N10—C11—C120.0 (11)C7—N8—C25—O26−177.2 (6)
N10—C11—C12—C13−1.9 (12)C9—N8—C25—O27−179.2 (5)
C11—C12—C13—C141.0 (10)C7—N8—C25—O272.2 (7)
C11—C12—C13—C15179.1 (6)O26—C25—O27—C2817.1 (8)
N10—C9—C14—C13−3.7 (9)N8—C25—O27—C28−162.3 (5)
N8—C9—C14—C13175.5 (5)C25—O27—C28—C3051.0 (7)
C12—C13—C14—C91.6 (8)C25—O27—C28—C29−73.6 (6)
C15—C13—C14—C9−176.5 (5)C25—O27—C28—C31167.7 (5)
C14—C13—C15—C16−108.4 (6)
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