Literature DB >> 21581005

(E)-Ethyl 2-cyano-2-(thia-zolidin-2-yl-idene)acetate.

Jian-Gang Wang, Fang-Fang Jian.   

Abstract

The title compound, C(8)H(10)N(2)O(2)S, was prepared by the reaction of 2-cyano-3,3-bis-(methyl-sulfan-yl)acrylate and 2-amino-ethanethiol at 350 K. The mol-ecular structure and packing are stabilized by N-H⋯O hydrogen-bond inter-actions. All the non-H atoms are nearly in the same plane with the maximum deviation being 0.08 Å.

Entities:  

Year:  2008        PMID: 21581005      PMCID: PMC2959598          DOI: 10.1107/S1600536808032984

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological properties of compounds containing thia­zolidine groups, see: Huang & Shi (1990 ▶); Iwata et al. (1988 ▶). For related compounds, see: Schroth et al. (1997 ▶).

Experimental

Crystal data

C8H10N2O2S M = 198.24 Monoclinic, a = 4.0676 (8) Å b = 15.460 (3) Å c = 14.581 (3) Å β = 90.03 (3)° V = 916.9 (3) Å3 Z = 4 Mo Kα radiation μ = 0.32 mm−1 T = 293 (2) K 0.20 × 0.12 × 0.09 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: none 6717 measured reflections 1577 independent reflections 1484 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.112 S = 1.24 1577 reflections 119 parameters H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.33 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808032984/at2647sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808032984/at2647Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H10N2O2SF(000) = 416
Mr = 198.24Dx = 1.436 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2422 reflections
a = 4.0676 (8) Åθ = 2.3–25.1°
b = 15.460 (3) ŵ = 0.32 mm1
c = 14.581 (3) ÅT = 293 K
β = 90.03 (3)°Needle, colourless
V = 916.9 (3) Å30.20 × 0.12 × 0.09 mm
Z = 4
Bruker SMART CCD area-detector diffractometer1484 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.025
graphiteθmax = 25.0°, θmin = 3.1°
φ and ω scansh = −4→4
6717 measured reflectionsk = −18→18
1577 independent reflectionsl = −17→17
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.051H-atom parameters constrained
wR(F2) = 0.112w = 1/[σ2(Fo2) + 2.059P] where P = (Fo2 + 2Fc2)/3
S = 1.24(Δ/σ)max < 0.001
1577 reflectionsΔρmax = 0.26 e Å3
119 parametersΔρmin = −0.33 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.041 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.2265 (2)0.70109 (5)0.01523 (5)0.0285 (3)
O2−0.2856 (6)0.91026 (13)0.24156 (14)0.0250 (5)
O1−0.1022 (6)0.97114 (14)0.11080 (15)0.0325 (6)
N2−0.1952 (7)0.68892 (17)0.23236 (18)0.0304 (7)
N10.1928 (7)0.86360 (17)−0.01208 (17)0.0279 (7)
H1A0.14400.9171−0.00370.034*
C30.1091 (7)0.80489 (19)0.0489 (2)0.0209 (6)
C6−0.1433 (8)0.9071 (2)0.1582 (2)0.0226 (7)
C7−0.3933 (9)0.9959 (2)0.2710 (2)0.0270 (7)
H7A−0.55821.01820.22910.032*
H7B−0.20881.03560.27170.032*
C10.3729 (10)0.7390 (2)−0.0946 (2)0.0337 (8)
H1B0.59460.7182−0.10530.040*
H1C0.23240.7174−0.14330.040*
C4−0.0547 (8)0.82003 (19)0.13177 (19)0.0213 (7)
C5−0.1330 (7)0.7482 (2)0.18828 (19)0.0220 (7)
C20.3686 (8)0.8366 (2)−0.0937 (2)0.0263 (7)
H2A0.59140.8590−0.09260.032*
H2B0.25930.8584−0.14810.032*
C8−0.5358 (9)0.9868 (2)0.3661 (2)0.0330 (8)
H8A−0.60971.04230.38730.049*
H8B−0.37030.96500.40690.049*
H8C−0.71800.94740.36450.049*
U11U22U33U12U13U23
S10.0436 (5)0.0177 (4)0.0241 (4)0.0040 (4)0.0121 (3)0.0002 (3)
O20.0389 (13)0.0167 (10)0.0192 (10)0.0020 (9)0.0100 (9)−0.0013 (8)
O10.0527 (15)0.0197 (11)0.0251 (12)0.0021 (11)0.0141 (11)0.0033 (9)
N20.0444 (17)0.0255 (14)0.0215 (14)0.0008 (13)0.0075 (12)0.0017 (12)
N10.0421 (17)0.0182 (13)0.0234 (14)0.0058 (12)0.0128 (12)0.0028 (10)
C30.0237 (15)0.0194 (14)0.0197 (15)0.0003 (13)−0.0012 (12)0.0001 (12)
C60.0272 (17)0.0223 (16)0.0183 (14)−0.0010 (13)0.0039 (12)−0.0021 (12)
C70.0385 (19)0.0182 (15)0.0244 (16)0.0012 (14)0.0057 (14)−0.0035 (12)
C10.051 (2)0.0258 (17)0.0245 (17)0.0088 (16)0.0135 (15)0.0034 (13)
C40.0274 (16)0.0180 (15)0.0183 (14)−0.0005 (13)0.0030 (12)0.0010 (11)
C50.0254 (16)0.0240 (16)0.0166 (14)0.0029 (13)0.0033 (12)−0.0030 (12)
C20.0312 (17)0.0266 (17)0.0212 (15)0.0000 (14)0.0076 (13)0.0001 (13)
C80.045 (2)0.0264 (17)0.0275 (17)0.0059 (16)0.0109 (15)−0.0042 (13)
S1—C31.745 (3)C7—C81.510 (4)
S1—C11.806 (3)C7—H7A0.9700
O2—C61.348 (3)C7—H7B0.9700
O2—C71.459 (4)C1—C21.510 (4)
O1—C61.218 (4)C1—H1B0.9700
N2—C51.147 (4)C1—H1C0.9700
N1—C31.315 (4)C4—C51.420 (4)
N1—C21.450 (4)C2—H2A0.9700
N1—H1A0.8600C2—H2B0.9700
C3—C41.400 (4)C8—H8A0.9600
C6—O11.218 (4)C8—H8B0.9600
C6—C41.446 (4)C8—H8C0.9600
C3—S1—C192.39 (14)S1—C1—H1B110.1
C6—O2—C7115.3 (2)C2—C1—H1C110.1
C3—N1—C2119.0 (3)S1—C1—H1C110.1
C3—N1—H1A120.5H1B—C1—H1C108.4
C2—N1—H1A120.5C3—C4—C5118.5 (3)
N1—C3—C4126.3 (3)C3—C4—C6120.3 (3)
N1—C3—S1111.9 (2)C5—C4—C6121.2 (3)
C4—C3—S1121.8 (2)N2—C5—C4178.5 (3)
O1—C6—O2122.8 (3)N1—C2—C1107.5 (2)
O1—C6—O2122.8 (3)N1—C2—H2A110.2
O1—C6—C4124.8 (3)C1—C2—H2A110.2
O1—C6—C4124.8 (3)N1—C2—H2B110.2
O2—C6—C4112.4 (3)C1—C2—H2B110.2
O2—C7—C8107.5 (2)H2A—C2—H2B108.5
O2—C7—H7A110.2C7—C8—H8A109.5
C8—C7—H7A110.2C7—C8—H8B109.5
O2—C7—H7B110.2H8A—C8—H8B109.5
C8—C7—H7B110.2C7—C8—H8C109.5
H7A—C7—H7B108.5H8A—C8—H8C109.5
C2—C1—S1108.2 (2)H8B—C8—H8C109.5
C2—C1—H1B110.1
C2—N1—C3—C4178.7 (3)S1—C3—C4—C5−1.6 (4)
C2—N1—C3—S1−1.4 (4)N1—C3—C4—C6−1.1 (5)
C1—S1—C3—N1−4.5 (3)S1—C3—C4—C6178.9 (2)
C1—S1—C3—C4175.4 (3)O1—C6—C4—C34.2 (5)
O1—O1—C6—O20.0 (3)O1—C6—C4—C34.2 (5)
O1—O1—C6—C40.0 (3)O2—C6—C4—C3−177.2 (3)
C7—O2—C6—O11.0 (4)O1—C6—C4—C5−175.3 (3)
C7—O2—C6—O11.0 (4)O1—C6—C4—C5−175.3 (3)
C7—O2—C6—C4−177.6 (3)O2—C6—C4—C53.3 (4)
C6—O2—C7—C8−178.4 (3)C3—N1—C2—C18.0 (4)
C3—S1—C1—C28.7 (3)S1—C1—C2—N1−10.3 (4)
N1—C3—C4—C5178.4 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O1i0.862.332.955 (3)129
N1—H1A···O10.862.122.723 (3)127
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O1i0.862.332.955 (3)129
N1—H1A⋯O10.862.122.723 (3)127

Symmetry code: (i) .

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