Literature DB >> 21581001

1-Cyclo-pentyl-idene-2-(2,4-dinitro-phenyl)-hydrazine.

Ning-Ning Ji, Zhi-Qiang Shi.   

Abstract

The title compound, C(11)H(12)N(4)O(4), was synthesized by the reaction of (2,4-dinitro-phen-yl)hydrazine with cyclo-penta-none. The cyclo-pentyl fragment is disordered over two sites with occupancies of 0.63 (1) and 0.37 (1). An intra-molecular N-H⋯O hydrogen bond helps to establish the conformation. Pairs of mol-ecules are held together by π-π inter-actions between adjacent benzene rings [centroid-to-centroid distance 3.589 (2) Å].

Entities:  

Year:  2008        PMID: 21581001      PMCID: PMC2959650          DOI: 10.1107/S1600536808033345

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background literature on Schiff bases, see: Liang (2007 ▶). For information on the properties of dinitro­phenyl­hydrazones, see: Baughman et al. (2004 ▶); Zare et al. (2005 ▶); El-Seify & El-Dossoki (2006 ▶); Kim & Yoon (1998 ▶). For bond-length data, see: Allen et al. (1987 ▶); Allen (2002 ▶).

Experimental

Crystal data

C11H12N4O4 M = 264.25 Monoclinic, a = 6.962 (3) Å b = 21.840 (10) Å c = 8.162 (4) Å β = 98.528 (9)° V = 1227.3 (10) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 295 (2) K 0.15 × 0.10 × 0.06 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.984, T max = 0.993 6423 measured reflections 2168 independent reflections 1353 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.129 S = 1.02 2168 reflections 192 parameters H-atom parameters constrained Δρmax = 0.13 e Å−3 Δρmin = −0.14 e Å−3 Data collection: SMART (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808033345/fb2114sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808033345/fb2114Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H12N4O4F(000) = 552
Mr = 264.25Dx = 1.430 Mg m3
Monoclinic, P21/nMelting point = 318–320 K
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 6.962 (3) ÅCell parameters from 1213 reflections
b = 21.84 (1) Åθ = 3.1–21.3°
c = 8.162 (4) ŵ = 0.11 mm1
β = 98.528 (9)°T = 295 K
V = 1227.3 (10) Å3Block, brown
Z = 40.15 × 0.10 × 0.06 mm
Bruker SMART CCD diffractometer2168 independent reflections
Radiation source: fine-focus sealed tube1353 reflections with I > 2σ(I)
graphiteRint = 0.029
φ and ω scansθmax = 25.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −7→8
Tmin = 0.984, Tmax = 0.993k = −20→26
6423 measured reflectionsl = −9→9
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042H-atom parameters constrained
wR(F2) = 0.129w = 1/[σ2(Fo2) + (0.0582P)2 + 0.1369P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
2168 reflectionsΔρmax = 0.13 e Å3
192 parametersΔρmin = −0.14 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
64 constraintsExtinction coefficient: 0.008 (2)
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
O10.7332 (3)−0.13258 (8)0.3023 (2)0.0970 (6)
O20.6598 (2)−0.04170 (8)0.3749 (2)0.0883 (6)
O31.2739 (3)−0.17276 (10)0.0323 (3)0.1106 (7)
O41.4641 (3)−0.09968 (8)−0.0180 (2)0.0979 (6)
N10.7661 (3)−0.07782 (10)0.3142 (2)0.0715 (5)
N21.3231 (3)−0.11920 (11)0.0400 (2)0.0802 (6)
N30.8813 (2)0.05130 (8)0.3322 (2)0.0643 (5)
H30.77310.04160.36430.077*
N40.9487 (3)0.11105 (8)0.3468 (2)0.0716 (5)
C10.9877 (3)0.00874 (9)0.2673 (2)0.0563 (5)
C20.9367 (3)−0.05376 (9)0.2535 (2)0.0583 (5)
C31.0473 (3)−0.09546 (10)0.1801 (2)0.0641 (6)
H3A1.0114−0.13650.17170.077*
C41.2096 (3)−0.07577 (10)0.1204 (2)0.0634 (6)
C51.2658 (3)−0.01508 (10)0.1343 (3)0.0653 (6)
H51.3777−0.00240.09440.078*
C61.1586 (3)0.02600 (10)0.2058 (3)0.0631 (6)
H61.19860.06660.21450.076*
C70.8305 (3)0.15004 (10)0.3923 (3)0.0690 (6)
C80.6290 (3)0.14145 (10)0.4287 (3)0.0785 (7)
H8A0.62920.11860.53060.094*
H8B0.55030.11970.33910.094*
C90.5515 (8)0.2067 (3)0.4458 (10)0.0954 (16)0.631 (10)
H9A0.45720.20780.52210.114*0.631 (10)
H9B0.49210.22270.33930.114*0.631 (10)
C100.7337 (8)0.2425 (3)0.5134 (10)0.0972 (15)0.631 (10)
H10A0.71570.28600.49240.117*0.631 (10)
H10B0.76900.23600.63160.117*0.631 (10)
C10'0.7036 (14)0.2469 (4)0.4218 (16)0.090 (2)0.369 (10)
H10C0.63450.25360.31110.108*0.369 (10)
H10D0.72240.28590.47880.108*0.369 (10)
C9'0.5961 (19)0.2020 (4)0.5176 (14)0.087 (2)0.369 (10)
H9'10.45910.21190.50800.105*0.369 (10)
H9'20.65180.20060.63370.105*0.369 (10)
C110.8888 (4)0.21600 (11)0.4170 (4)0.0979 (8)
H11A0.88680.23670.31160.117*
H11B1.01760.21960.48050.117*
U11U22U33U12U13U23
O10.0998 (14)0.0748 (12)0.1191 (15)−0.0291 (10)0.0247 (11)0.0028 (10)
O20.0678 (11)0.0882 (12)0.1131 (14)−0.0079 (9)0.0276 (10)0.0071 (10)
O30.1313 (17)0.0738 (12)0.1310 (17)0.0164 (11)0.0340 (13)−0.0039 (11)
O40.0988 (14)0.1102 (14)0.0911 (13)0.0162 (11)0.0353 (11)0.0015 (11)
N10.0660 (13)0.0744 (14)0.0725 (13)−0.0132 (11)0.0047 (10)0.0104 (10)
N20.0869 (15)0.0837 (16)0.0694 (13)0.0160 (13)0.0095 (11)0.0062 (11)
N30.0584 (11)0.0658 (11)0.0695 (12)−0.0059 (9)0.0124 (9)0.0045 (9)
N40.0675 (12)0.0604 (11)0.0879 (14)−0.0060 (10)0.0151 (10)0.0050 (10)
C10.0544 (12)0.0634 (12)0.0494 (11)−0.0002 (10)0.0019 (9)0.0087 (9)
C20.0562 (12)0.0630 (12)0.0535 (11)−0.0059 (10)0.0011 (9)0.0108 (10)
C30.0697 (14)0.0613 (13)0.0575 (12)−0.0040 (11)−0.0025 (11)0.0099 (10)
C40.0685 (14)0.0646 (13)0.0555 (12)0.0088 (11)0.0032 (10)0.0091 (10)
C50.0593 (12)0.0761 (14)0.0610 (13)−0.0003 (11)0.0104 (10)0.0106 (11)
C60.0625 (13)0.0638 (13)0.0626 (13)−0.0067 (10)0.0080 (11)0.0077 (10)
C70.0733 (14)0.0660 (13)0.0688 (14)−0.0015 (12)0.0145 (11)0.0070 (11)
C80.0805 (16)0.0807 (15)0.0784 (15)−0.0003 (12)0.0254 (12)0.0018 (12)
C90.104 (3)0.095 (3)0.093 (3)0.023 (2)0.030 (3)0.011 (3)
C100.118 (3)0.076 (3)0.098 (3)0.011 (2)0.016 (3)0.002 (3)
C10'0.110 (4)0.066 (3)0.094 (4)0.012 (3)0.016 (4)0.007 (4)
C9'0.095 (4)0.080 (3)0.090 (4)0.010 (3)0.026 (4)0.007 (4)
C110.1034 (19)0.0699 (15)0.123 (2)−0.0041 (14)0.0257 (16)0.0030 (14)
O1—N11.219 (2)C7—C111.502 (3)
O2—N11.234 (2)C8—C91.538 (6)
O3—N21.218 (2)C8—C9'1.542 (10)
O4—N21.227 (3)C8—H8A0.9700
N1—C21.452 (3)C8—H8B0.9700
N2—C41.453 (3)C9—C101.522 (7)
N3—C11.345 (3)C9—H9A0.9700
N3—N41.386 (2)C9—H9B0.9700
N3—H30.8600C10—C111.540 (6)
N4—C71.277 (3)C10—H10A0.9700
C1—C61.409 (3)C10—H10B0.9700
C1—C21.411 (3)C10'—C111.461 (9)
C2—C31.385 (3)C10'—C9'1.519 (2)
C3—C41.364 (3)C10'—H10C0.9700
C3—H3A0.9300C10'—H10D0.9700
C4—C51.382 (3)C9'—H9'10.9700
C5—C61.354 (3)C9'—H9'20.9700
C5—H50.9300C11—H11A0.9700
C6—H60.9300C11—H11B0.9700
C7—C81.488 (3)
O1—N1—O2122.8 (2)C9—C8—H8B110.8
O1—N1—C2118.8 (2)C9'—C8—H8B131.9
O2—N1—C2118.38 (19)H8A—C8—H8B108.9
O3—N2—O4123.3 (2)C8—C9—C10102.9 (5)
O3—N2—C4118.9 (2)C8—C9—H9A111.2
O4—N2—C4117.9 (2)C10—C9—H9A111.2
C1—N3—N4119.05 (18)C8—C9—H9B111.2
C1—N3—H3120.5C10—C9—H9B111.2
N4—N3—H3120.5H9A—C9—H9B109.1
C7—N4—N3115.38 (19)C11—C10—C9103.4 (5)
N3—C1—C6119.90 (19)C11—C10—H10A111.1
N3—C1—C2123.60 (19)C9—C10—H10A111.1
C6—C1—C2116.5 (2)C11—C10—H10B111.1
C3—C2—C1121.43 (19)C9—C10—H10B111.1
C3—C2—N1116.4 (2)H10A—C10—H10B109.0
C1—C2—N1122.1 (2)C11—C10'—C9'102.7 (7)
C4—C3—C2119.3 (2)C11—C10'—H10C111.2
C4—C3—H3A120.3C9'—C10'—H10C111.2
C2—C3—H3A120.3C11—C10'—H10D111.2
C3—C4—C5120.8 (2)C9'—C10'—H10D111.2
C3—C4—N2119.4 (2)H10C—C10'—H10D109.1
C5—C4—N2119.8 (2)C10'—C9'—C8101.1 (7)
C6—C5—C4120.2 (2)C10'—C9'—H9'1111.5
C6—C5—H5119.9C8—C9'—H9'1111.5
C4—C5—H5119.9C10'—C9'—H9'2111.5
C5—C6—C1121.7 (2)C8—C9'—H9'2111.5
C5—C6—H6119.2H9'1—C9'—H9'2109.4
C1—C6—H6119.2C10'—C11—C7103.0 (4)
N4—C7—C8129.9 (2)C7—C11—C10103.5 (3)
N4—C7—C11120.4 (2)C10'—C11—H11A85.0
C8—C7—C11109.8 (2)C7—C11—H11A111.1
C7—C8—C9104.8 (3)C10—C11—H11A111.1
C7—C8—C9'101.3 (4)C10'—C11—H11B134.2
C7—C8—H8A110.8C7—C11—H11B111.1
C9—C8—H8A110.8C10—C11—H11B111.1
C9'—C8—H8A91.1H11A—C11—H11B109.0
C7—C8—H8B110.8
D—H···AD—HH···AD···AD—H···A
N3—H3···O20.861.992.605 (2)128
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3⋯O20.861.992.605 (2)128
  3 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  2,4-Dinitrophenylhydrazones of 2,4-dihydroxybenzaldehyde, 2,4-dihydroxyacetophenone and 2,4-dihydroxybenzophenone.

Authors:  Russell G Baughman; Kenneth L Martin; Rajendra K Singh; James O Stoffer
Journal:  Acta Crystallogr C       Date:  2004-01-10       Impact factor: 1.172

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  3 in total
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1.  4-{[2-(2,4-Dinitro-phen-yl)hydrazinyl-idene]meth-yl}phenol ethanol hemisolvate.

Authors:  Xiu-Rong Zhai
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-13

2.  2-(1H-1,2,3-Benzotriazol-1-yl)-N'-(2-chloro-benzyl-idene)acetohydrazide.

Authors:  Guo-Fang He; Zhi-Qiang Shi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-08
  2 in total

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