Literature DB >> 21580973

4-Nitro-N-(4-pyridinio)benzene-sulfonamidate monohydrate.

Yu-Zhen Chen, Han Gao, Gang Li, Xiao-Jing Chen, Sheng-Yang Niu.   

Abstract

The title compound, C(11)H(9)N(3)O(4)S·H(2)O, contains both an acid and a base centre, and displays a zwitterionic structure in the solid state. The benzene ring makes an angle of 109.1 (2)° with the pyridinium ring. The crystal structure is stabilized by O-H⋯N, O-H⋯O and N-H⋯O hydrogen bonds.

Entities:  

Year:  2008        PMID: 21580973      PMCID: PMC2959784          DOI: 10.1107/S1600536808032273

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Allen et al. (1987 ▶); Li et al. (2007 ▶); Damiano et al. (2007 ▶); Yu & Li (2007 ▶).

Experimental

Crystal data

C11H9N3O4S·H2O M = 297.29 Monoclinic, a = 6.7766 (14) Å b = 8.3932 (17) Å c = 21.717 (4) Å β = 92.35 (3)° V = 1234.2 (4) Å3 Z = 4 Mo Kα radiation μ = 0.29 mm−1 T = 113 (2) K 0.20 × 0.18 × 0.12 mm

Data collection

Rigaku Saturn CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.932, T max = 0.963 9708 measured reflections 2908 independent reflections 2022 reflections with I > 2σ(I) R int = 0.061

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.136 S = 1.17 2908 reflections 193 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.35 e Å−3 Δρmin = −0.45 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808032273/at2641sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808032273/at2641Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H9N3O4S·H2OF(000) = 616
Mr = 297.29Dx = 1.600 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3340 reflections
a = 6.7766 (14) Åθ = 1.9–27.9°
b = 8.3932 (17) ŵ = 0.29 mm1
c = 21.717 (4) ÅT = 113 K
β = 92.35 (3)°Block, colourless
V = 1234.2 (4) Å30.20 × 0.18 × 0.12 mm
Z = 4
Rigaku Saturn CCD area-detector diffractometer2908 independent reflections
Radiation source: rotating anode2022 reflections with I > 2σ(I)
confocalRint = 0.061
Detector resolution: 7.31 pixels mm-1θmax = 27.9°, θmin = 1.9°
ω and φ scansh = −8→7
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)k = −11→10
Tmin = 0.932, Tmax = 0.963l = −19→28
9708 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.136H atoms treated by a mixture of independent and constrained refinement
S = 1.17w = 1/[σ2(Fo2) + (0.031P)2 + 1.5168P] where P = (Fo2 + 2Fc2)/3
2908 reflections(Δ/σ)max = 0.002
193 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.45 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.89206 (11)0.18818 (8)0.12547 (3)0.01574 (18)
N10.7145 (4)0.7176 (3)0.00969 (13)0.0228 (6)
H1A0.707 (6)0.823 (5)−0.0019 (19)0.048 (12)*
N20.8061 (4)0.2477 (3)0.06005 (11)0.0166 (5)
N30.2350 (4)0.1341 (3)0.29976 (12)0.0236 (6)
O11.0378 (3)0.2937 (2)0.15368 (9)0.0197 (5)
O20.9523 (3)0.0240 (2)0.11577 (10)0.0208 (5)
O30.2477 (4)0.2106 (3)0.34777 (10)0.0332 (6)
O40.0934 (4)0.0497 (3)0.28506 (13)0.0401 (7)
C10.7738 (4)0.4058 (3)0.04742 (13)0.0151 (6)
C20.7618 (5)0.5312 (3)0.09068 (14)0.0203 (6)
H20.77360.50990.13360.024*
C30.7329 (5)0.6835 (4)0.06978 (16)0.0259 (7)
H30.72570.76770.09890.031*
C40.7199 (5)0.6006 (4)−0.03300 (14)0.0204 (6)
H40.70530.6265−0.07550.024*
C50.7463 (4)0.4454 (3)−0.01543 (14)0.0176 (6)
H50.74620.3638−0.04580.021*
C60.6953 (4)0.1762 (3)0.17671 (13)0.0150 (6)
C70.5306 (5)0.0811 (3)0.16067 (13)0.0182 (6)
H70.52300.02750.12210.022*
C80.3798 (5)0.0659 (3)0.20114 (14)0.0180 (6)
H80.26780.00130.19120.022*
C90.3961 (4)0.1475 (3)0.25685 (13)0.0171 (6)
C100.5550 (5)0.2447 (3)0.27298 (14)0.0199 (6)
H100.55980.30110.31090.024*
C110.7072 (5)0.2580 (3)0.23239 (13)0.0189 (6)
H110.81890.32260.24260.023*
O50.7268 (4)0.0224 (2)−0.03361 (11)0.0216 (5)
H5A0.763 (6)0.079 (5)−0.003 (2)0.046 (13)*
H5B0.815 (7)0.027 (5)−0.060 (2)0.049 (14)*
U11U22U33U12U13U23
S10.0176 (4)0.0143 (3)0.0154 (3)0.0017 (3)0.0016 (3)0.0006 (3)
N10.0216 (15)0.0139 (11)0.0326 (15)−0.0023 (10)−0.0021 (12)0.0047 (11)
N20.0213 (14)0.0133 (11)0.0152 (11)0.0014 (10)0.0005 (10)0.0005 (9)
N30.0253 (15)0.0227 (13)0.0231 (14)0.0026 (11)0.0061 (12)0.0037 (11)
O10.0175 (11)0.0213 (10)0.0203 (11)−0.0013 (9)−0.0007 (8)−0.0004 (9)
O20.0254 (12)0.0151 (10)0.0222 (11)0.0054 (8)0.0056 (9)0.0025 (8)
O30.0445 (16)0.0358 (13)0.0202 (11)−0.0024 (11)0.0134 (11)−0.0026 (10)
O40.0294 (15)0.0468 (15)0.0452 (16)−0.0171 (12)0.0146 (13)−0.0081 (13)
C10.0116 (15)0.0138 (12)0.0201 (14)−0.0010 (10)0.0029 (12)0.0012 (11)
C20.0251 (17)0.0172 (13)0.0184 (14)0.0024 (12)−0.0027 (13)−0.0017 (12)
C30.0309 (19)0.0169 (14)0.0292 (17)0.0010 (13)−0.0068 (14)−0.0050 (13)
C40.0158 (16)0.0244 (14)0.0211 (15)0.0013 (12)0.0026 (12)0.0048 (12)
C50.0135 (15)0.0199 (13)0.0196 (14)0.0005 (11)0.0037 (12)−0.0003 (12)
C60.0155 (15)0.0147 (12)0.0148 (13)0.0028 (11)0.0008 (11)0.0019 (11)
C70.0204 (16)0.0189 (13)0.0150 (13)0.0013 (12)−0.0024 (12)−0.0021 (11)
C80.0164 (16)0.0166 (13)0.0207 (14)0.0005 (11)−0.0012 (12)−0.0003 (12)
C90.0180 (15)0.0170 (13)0.0165 (14)0.0022 (11)0.0033 (12)0.0033 (11)
C100.0241 (17)0.0205 (13)0.0151 (13)0.0021 (12)0.0000 (12)−0.0035 (12)
C110.0221 (16)0.0190 (13)0.0156 (13)−0.0026 (12)−0.0008 (12)−0.0012 (11)
O50.0292 (14)0.0158 (10)0.0199 (11)−0.0026 (9)0.0037 (10)−0.0011 (9)
S1—O11.444 (2)C4—C51.367 (4)
S1—O21.455 (2)C4—H40.9500
S1—N21.594 (2)C5—H50.9500
S1—C61.774 (3)C6—C111.390 (4)
N1—C31.337 (4)C6—C71.404 (4)
N1—C41.352 (4)C7—C81.381 (4)
N1—H1A0.92 (4)C7—H70.9500
N2—C11.370 (3)C8—C91.391 (4)
N3—O41.224 (4)C8—H80.9500
N3—O31.225 (3)C9—C101.385 (4)
N3—C91.468 (4)C10—C111.388 (4)
C1—C51.410 (4)C10—H100.9500
C1—C21.416 (4)C11—H110.9500
C2—C31.368 (4)O5—H5A0.85 (4)
C2—H20.9500O5—H5B0.85 (5)
C3—H30.9500
O1—S1—O2116.81 (13)C5—C4—H4119.8
O1—S1—N2113.86 (13)C4—C5—C1120.4 (3)
O2—S1—N2105.21 (12)C4—C5—H5119.8
O1—S1—C6106.69 (13)C1—C5—H5119.8
O2—S1—C6105.05 (13)C11—C6—C7120.9 (3)
N2—S1—C6108.69 (13)C11—C6—S1120.0 (2)
C3—N1—C4120.7 (3)C7—C6—S1119.1 (2)
C3—N1—H1A118 (3)C8—C7—C6119.8 (3)
C4—N1—H1A121 (3)C8—C7—H7120.1
C1—N2—S1122.1 (2)C6—C7—H7120.1
O4—N3—O3123.5 (3)C7—C8—C9118.2 (3)
O4—N3—C9118.3 (3)C7—C8—H8120.9
O3—N3—C9118.2 (3)C9—C8—H8120.9
N2—C1—C5115.9 (2)C10—C9—C8122.9 (3)
N2—C1—C2126.9 (3)C10—C9—N3118.4 (3)
C5—C1—C2117.2 (3)C8—C9—N3118.7 (3)
C3—C2—C1119.1 (3)C9—C10—C11118.5 (3)
C3—C2—H2120.5C9—C10—H10120.8
C1—C2—H2120.5C11—C10—H10120.8
N1—C3—C2122.0 (3)C10—C11—C6119.6 (3)
N1—C3—H3119.0C10—C11—H11120.2
C2—C3—H3119.0C6—C11—H11120.2
N1—C4—C5120.5 (3)H5A—O5—H5B109 (4)
N1—C4—H4119.8
O1—S1—N2—C1−36.5 (3)O2—S1—C6—C7−55.7 (3)
O2—S1—N2—C1−165.6 (2)N2—S1—C6—C756.5 (3)
C6—S1—N2—C182.3 (3)C11—C6—C7—C8−1.3 (4)
S1—N2—C1—C5164.4 (2)S1—C6—C7—C8177.6 (2)
S1—N2—C1—C2−16.8 (4)C6—C7—C8—C90.5 (4)
N2—C1—C2—C3178.6 (3)C7—C8—C9—C101.0 (4)
C5—C1—C2—C3−2.7 (5)C7—C8—C9—N3179.0 (3)
C4—N1—C3—C21.4 (5)O4—N3—C9—C10179.1 (3)
C1—C2—C3—N10.4 (5)O3—N3—C9—C100.6 (4)
C3—N1—C4—C5−0.6 (5)O4—N3—C9—C80.9 (4)
N1—C4—C5—C1−1.8 (5)O3—N3—C9—C8−177.6 (3)
N2—C1—C5—C4−177.7 (3)C8—C9—C10—C11−1.7 (4)
C2—C1—C5—C43.4 (4)N3—C9—C10—C11−179.8 (3)
O1—S1—C6—C11−1.5 (3)C9—C10—C11—C61.0 (4)
O2—S1—C6—C11123.1 (2)C7—C6—C11—C100.5 (4)
N2—S1—C6—C11−124.7 (2)S1—C6—C11—C10−178.3 (2)
O1—S1—C6—C7179.7 (2)
D—H···AD—HH···AD···AD—H···A
O5—H5A···N20.85 (4)1.97 (4)2.813 (3)167 (4)
O5—H5B···O2i0.85 (5)2.07 (5)2.895 (3)164 (4)
N1—H1A···O5ii0.92 (4)1.82 (4)2.728 (3)170 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H5A⋯N20.85 (4)1.97 (4)2.813 (3)167 (4)
O5—H5B⋯O2i0.85 (5)2.07 (5)2.895 (3)164 (4)
N1—H1A⋯O5ii0.92 (4)1.82 (4)2.728 (3)170 (4)

Symmetry codes: (i) ; (ii) .

  2 in total

1.  Photochemical transformations of pyridinium salts: mechanistic studies and applications in synthesis.

Authors:  Teresa Damiano; Daniel Morton; Adam Nelson
Journal:  Org Biomol Chem       Date:  2007-06-29       Impact factor: 3.876

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  2 in total

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