Literature DB >> 21580970

A second monoclinic polymorph of N-(pyrazin-2-yl)aniline.

Zanariah Abdullah1, Seik Weng Ng.   

Abstract

The two aromatic rings in the title compound, C(10)H(9)N(3), are aligned at 23.4 (1)° and the bridging C-N-C angle is 128.9 (1)°. In the crystal structure, intermolecular N-H⋯N hydrogen bonds result in a chain motif, the repeat distance of which is half the b axial length of 8.8851 (3) Å.

Entities:  

Year:  2008        PMID: 21580970      PMCID: PMC2959673          DOI: 10.1107/S1600536808031954

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

In the P21/c modification, the aromatic rings are aligned at 15.2 (1)°, and the repeat distance of the helical chain is half the b-axial length of 7.8423 (3) Å; see: Wan Saffiee et al. (2008 ▶).

Experimental

Crystal data

C10H9N3 M = 171.20 Monoclinic, a = 8.2194 (3) Å b = 8.8851 (3) Å c = 11.8395 (4) Å β = 104.643 (2)° V = 836.56 (5) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 100 (2) K 0.25 × 0.05 × 0.03 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: none 7621 measured reflections 1922 independent reflections 1389 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.113 S = 1.03 1922 reflections 122 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.23 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2008 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808031954/pk2124sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808031954/pk2124Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H9N3F(000) = 360
Mr = 171.20Dx = 1.359 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 1282 reflections
a = 8.2194 (3) Åθ = 2.7–26.1°
b = 8.8851 (3) ŵ = 0.09 mm1
c = 11.8395 (4) ÅT = 100 K
β = 104.643 (2)°Prism, pale yellow
V = 836.56 (5) Å30.25 × 0.05 × 0.03 mm
Z = 4
Bruker SMART APEX diffractometer1389 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.045
graphiteθmax = 27.5°, θmin = 2.7°
ω scansh = −10→10
7621 measured reflectionsk = −11→11
1922 independent reflectionsl = −15→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.113H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0547P)2 + 0.1331P] where P = (Fo2 + 2Fc2)/3
1922 reflections(Δ/σ)max = 0.001
122 parametersΔρmax = 0.20 e Å3
0 restraintsΔρmin = −0.22 e Å3
xyzUiso*/Ueq
N11.00115 (16)0.42084 (14)0.63143 (11)0.0216 (3)
H11.103 (2)0.377 (2)0.6527 (15)0.035 (5)*
N20.84988 (15)0.63197 (14)0.66840 (11)0.0230 (3)
N31.15770 (16)0.76478 (14)0.78284 (11)0.0228 (3)
C10.86787 (18)0.33136 (16)0.56827 (12)0.0193 (3)
C20.89595 (19)0.17682 (17)0.56499 (13)0.0254 (4)
H21.00210.13670.60490.030*
C30.7717 (2)0.08147 (17)0.50462 (14)0.0264 (4)
H30.7933−0.02350.50300.032*
C40.61582 (19)0.13750 (17)0.44633 (13)0.0232 (3)
H40.52960.07170.40580.028*
C50.58777 (19)0.29106 (17)0.44814 (13)0.0222 (3)
H50.48150.33050.40790.027*
C60.71238 (18)0.38836 (16)0.50783 (13)0.0211 (3)
H60.69160.49360.50740.025*
C70.99583 (18)0.56191 (16)0.67668 (13)0.0192 (3)
C81.14967 (18)0.63040 (16)0.73478 (13)0.0213 (3)
H81.25140.57720.73930.026*
C91.00948 (18)0.83515 (18)0.77382 (13)0.0248 (4)
H91.00850.93250.80690.030*
C100.8604 (2)0.76892 (17)0.71788 (14)0.0254 (4)
H100.75920.82260.71390.030*
U11U22U33U12U13U23
N10.0144 (7)0.0200 (7)0.0276 (7)0.0019 (5)0.0003 (5)−0.0014 (5)
N20.0173 (6)0.0230 (7)0.0272 (7)0.0004 (5)0.0027 (5)−0.0036 (5)
N30.0195 (7)0.0228 (7)0.0251 (7)−0.0033 (5)0.0037 (5)−0.0011 (5)
C10.0180 (7)0.0205 (7)0.0193 (7)−0.0010 (6)0.0048 (6)−0.0009 (6)
C20.0217 (8)0.0227 (8)0.0289 (8)0.0040 (6)0.0012 (6)0.0000 (6)
C30.0293 (9)0.0176 (8)0.0307 (9)0.0005 (6)0.0043 (7)−0.0019 (6)
C40.0217 (8)0.0233 (8)0.0244 (8)−0.0059 (6)0.0053 (6)−0.0035 (6)
C50.0173 (7)0.0251 (8)0.0229 (8)0.0005 (6)0.0026 (6)−0.0006 (6)
C60.0195 (8)0.0190 (7)0.0237 (8)0.0005 (6)0.0031 (6)−0.0011 (6)
C70.0175 (7)0.0198 (7)0.0194 (7)0.0004 (6)0.0030 (6)0.0020 (6)
C80.0177 (7)0.0224 (8)0.0233 (8)−0.0001 (6)0.0041 (6)0.0015 (6)
C90.0228 (8)0.0220 (8)0.0284 (8)−0.0016 (6)0.0047 (6)−0.0049 (6)
C100.0202 (8)0.0241 (8)0.0307 (9)0.0032 (6)0.0043 (6)−0.0041 (7)
N1—C71.3681 (19)C3—H30.9500
N1—C11.4061 (19)C4—C51.385 (2)
N1—H10.897 (18)C4—H40.9500
N2—C71.3330 (18)C5—C61.389 (2)
N2—C101.3438 (19)C5—H50.9500
N3—C81.3171 (19)C6—H60.9500
N3—C91.3494 (19)C7—C81.415 (2)
C1—C61.393 (2)C8—H80.9500
C1—C21.395 (2)C9—C101.370 (2)
C2—C31.379 (2)C9—H90.9500
C2—H20.9500C10—H100.9500
C3—C41.385 (2)
C7—N1—C1128.94 (13)C4—C5—H5119.4
C7—N1—H1114.0 (12)C6—C5—H5119.4
C1—N1—H1116.7 (11)C5—C6—C1119.86 (14)
C7—N2—C10115.67 (13)C5—C6—H6120.1
C8—N3—C9116.12 (13)C1—C6—H6120.1
C6—C1—C2118.72 (13)N2—C7—N1121.09 (13)
C6—C1—N1123.92 (13)N2—C7—C8120.79 (13)
C2—C1—N1117.35 (13)N1—C7—C8118.11 (13)
C3—C2—C1120.88 (14)N3—C8—C7122.74 (13)
C3—C2—H2119.6N3—C8—H8118.6
C1—C2—H2119.6C7—C8—H8118.6
C2—C3—C4120.52 (14)N3—C9—C10121.23 (14)
C2—C3—H3119.7N3—C9—H9119.4
C4—C3—H3119.7C10—C9—H9119.4
C5—C4—C3118.88 (14)N2—C10—C9123.44 (14)
C5—C4—H4120.6N2—C10—H10118.3
C3—C4—H4120.6C9—C10—H10118.3
C4—C5—C6121.11 (14)
C7—N1—C1—C621.9 (2)C10—N2—C7—N1178.88 (14)
C7—N1—C1—C2−159.27 (15)C10—N2—C7—C80.2 (2)
C6—C1—C2—C3−1.0 (2)C1—N1—C7—N22.9 (2)
N1—C1—C2—C3−179.81 (14)C1—N1—C7—C8−178.36 (14)
C1—C2—C3—C4−0.3 (2)C9—N3—C8—C70.0 (2)
C2—C3—C4—C51.0 (2)N2—C7—C8—N3−0.2 (2)
C3—C4—C5—C6−0.5 (2)N1—C7—C8—N3−178.92 (13)
C4—C5—C6—C1−0.8 (2)C8—N3—C9—C100.1 (2)
C2—C1—C6—C51.5 (2)C7—N2—C10—C90.0 (2)
N1—C1—C6—C5−179.75 (13)N3—C9—C10—N2−0.1 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1···N3i0.90 (2)2.17 (2)3.062 (2)175 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯N3i0.90 (2)2.17 (2)3.062 (2)175 (2)

Symmetry code: (i) .

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