Literature DB >> 21580899

Bis[2-(2-pyridylmethyl-eneamino)benzene-sulfonato-κN,N',O]cadmium(II) dihydrate.

Miao Ou-Yang, Xue-Ren Huang, Yun-Liang Zhang, Yi-Min Jiang.   

Abstract

The title complex, [Cd(Paba)(2)]·2H(2)O or [Cd(C(12)H(9)N(2)O(3)S)(2)]·2H(2)O, was synthesized by the reaction of the potassium salt of 2-(2-pyridylmethyl-eneamino)benzene-sulfonic acid (PabaK) with CdCl(2)·2.5H(2)O in methanol. The Cd(II) atom lies on a crystallographic twofold axis and is coordinated by four N atoms and two O atoms from two deprotonated tridentate 2-(2-pyridylmethyl-eneamino)benzene-sulfonate ligands in a slightly distorted octa-hedral environment. There are extensive hydrogen bonds of the type O-H⋯O between the uncoordinated water molecules and the sulfonate O atoms, through which the complex forms a layered structure parallel to (001).

Entities:  

Year:  2008        PMID: 21580899      PMCID: PMC2959732          DOI: 10.1107/S1600536808034387

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the isostructural Zn compound, see: Cai et al. (2008 ▶). For synthesis of the ligand, see: Casella & Gullotti (1986 ▶).

Experimental

Crystal data

[Cd(C12H9N2O3S)2]·2H2O M = 670.98 Orthorhombic, a = 20.255 (4) Å b = 7.8924 (17) Å c = 16.475 (3) Å V = 2633.7 (9) Å3 Z = 4 Mo Kα radiation μ = 1.04 mm−1 T = 291 (2) K 0.23 × 0.08 × 0.05 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.798, T max = 0.950 18106 measured reflections 2443 independent reflections 1672 reflections with I > 2σ(I) R int = 0.075

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.075 S = 1.04 2443 reflections 177 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.33 e Å−3 Data collection: SMART (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808034387/pk2123sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808034387/pk2123Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cd(C12H9N2O3S)2]·2H2OF(000) = 1352
Mr = 670.98Dx = 1.692 Mg m3
Orthorhombic, PbcnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2abCell parameters from 2541 reflections
a = 20.255 (4) Åθ = 2.5–23.2°
b = 7.8924 (17) ŵ = 1.04 mm1
c = 16.475 (3) ÅT = 291 K
V = 2633.7 (9) Å3Block, colourless
Z = 40.23 × 0.08 × 0.05 mm
Bruker SMART CCD area-detector diffractometer2443 independent reflections
Radiation source: fine-focus sealed tube1672 reflections with I > 2σ(I)
graphiteRint = 0.075
φ and ω scansθmax = 25.5°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −24→24
Tmin = 0.798, Tmax = 0.950k = −9→9
18106 measured reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.075H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0212P)2 + 3.1957P] where P = (Fo2 + 2Fc2)/3
2443 reflections(Δ/σ)max = 0.001
177 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR andgoodness of fit S are based on F2, conventional R-factors R are basedon F, with F set to zero for negative F2. The threshold expression ofF2 > σ(F2) is used only for calculating R-factors(gt) etc. and isnot relevant to the choice of reflections for refinement. R-factors basedon F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cd10.50000.68040 (5)0.75000.03074 (13)
S20.62752 (5)0.83468 (15)0.66388 (6)0.0372 (3)
N10.59409 (15)0.7358 (4)0.83494 (18)0.0302 (7)
C120.60345 (19)0.6263 (5)0.8904 (2)0.0382 (10)
H120.63930.63810.92530.046*
N30.50869 (16)0.4691 (4)0.84673 (18)0.0373 (8)
O10.64757 (15)0.6598 (4)0.67446 (17)0.0523 (8)
O20.55529 (12)0.8506 (4)0.66248 (15)0.0413 (7)
O30.65696 (14)0.9203 (4)0.59556 (16)0.0509 (8)
O40.69916 (18)0.4179 (6)0.5615 (2)0.1121 (17)
H1W0.68400.49040.59480.168*
H2W0.73240.37780.58330.168*
C10.65210 (16)0.9451 (5)0.7530 (3)0.0342 (9)
C20.63521 (18)0.8827 (5)0.8292 (2)0.0319 (9)
C30.6563 (2)0.9697 (6)0.8973 (3)0.0455 (11)
H30.64620.92810.94860.055*
C40.6920 (2)1.1170 (6)0.8899 (3)0.0552 (13)
H40.70571.17480.93610.066*
C50.7074 (2)1.1785 (6)0.8147 (3)0.0561 (13)
H50.73101.27900.80990.067*
C60.6880 (2)1.0922 (5)0.7457 (3)0.0481 (11)
H60.69921.13330.69470.058*
C70.55885 (19)0.4823 (5)0.9002 (2)0.0334 (9)
C80.5667 (2)0.3684 (5)0.9628 (2)0.0445 (11)
H80.60200.37800.99850.053*
C90.5212 (2)0.2402 (6)0.9716 (3)0.0520 (13)
H90.52530.16251.01380.062*
C100.4700 (2)0.2279 (5)0.9178 (3)0.0491 (12)
H100.43870.14240.92320.059*
C110.4654 (2)0.3423 (6)0.8565 (3)0.0465 (11)
H110.43080.33220.81970.056*
U11U22U33U12U13U23
Cd10.0291 (2)0.0362 (2)0.0269 (2)0.000−0.00588 (19)0.000
S20.0355 (6)0.0497 (7)0.0265 (5)−0.0025 (6)−0.0008 (4)0.0002 (5)
N10.0246 (16)0.0403 (19)0.0257 (17)−0.0062 (15)−0.0016 (14)0.0016 (16)
C120.032 (2)0.055 (3)0.027 (2)0.000 (2)−0.0072 (18)−0.001 (2)
N30.043 (2)0.0398 (19)0.0289 (17)−0.0012 (18)−0.0090 (17)0.0029 (15)
O10.065 (2)0.047 (2)0.0442 (18)0.0116 (16)−0.0022 (15)−0.0107 (15)
O20.0329 (15)0.059 (2)0.0322 (15)−0.0061 (14)−0.0076 (12)0.0112 (14)
O30.0464 (18)0.077 (2)0.0296 (16)−0.0113 (17)0.0048 (14)0.0037 (16)
O40.066 (2)0.168 (4)0.102 (3)0.043 (3)−0.025 (2)−0.068 (3)
C10.0245 (18)0.044 (2)0.034 (2)0.0008 (16)−0.004 (2)−0.004 (2)
C20.024 (2)0.037 (2)0.034 (2)0.0001 (18)−0.0021 (18)−0.0005 (19)
C30.042 (3)0.062 (3)0.032 (2)−0.007 (2)0.001 (2)−0.004 (2)
C40.053 (3)0.070 (3)0.043 (3)−0.020 (3)−0.002 (2)−0.019 (2)
C50.048 (3)0.058 (3)0.062 (3)−0.026 (3)0.002 (2)−0.011 (3)
C60.042 (2)0.057 (3)0.045 (3)−0.012 (2)0.001 (2)0.000 (3)
C70.035 (2)0.036 (2)0.029 (2)−0.0003 (19)−0.0025 (18)−0.0014 (18)
C80.052 (3)0.047 (3)0.035 (2)0.006 (2)−0.011 (2)0.005 (2)
C90.081 (4)0.037 (3)0.038 (3)0.002 (2)−0.007 (2)0.010 (2)
C100.071 (3)0.036 (3)0.040 (3)−0.013 (2)−0.005 (2)0.001 (2)
C110.055 (3)0.045 (3)0.039 (3)−0.013 (2)−0.010 (2)0.004 (2)
Cd1—O2i2.267 (3)C1—C61.375 (5)
Cd1—O22.267 (3)C1—C21.390 (5)
Cd1—N3i2.313 (3)C2—C31.383 (5)
Cd1—N32.313 (3)C3—C41.374 (6)
Cd1—N1i2.405 (3)C3—H30.9300
Cd1—N12.405 (3)C4—C51.367 (6)
S2—O31.442 (3)C4—H40.9300
S2—O11.449 (3)C5—C61.381 (6)
S2—O21.469 (3)C5—H50.9300
S2—C11.779 (4)C6—H60.9300
N1—C121.272 (5)C7—C81.377 (5)
N1—C21.431 (5)C8—C91.376 (6)
C12—C71.461 (5)C8—H80.9300
C12—H120.9300C9—C101.368 (6)
N3—C111.340 (5)C9—H90.9300
N3—C71.349 (5)C10—C111.359 (6)
O4—H1W0.8502C10—H100.9300
O4—H2W0.8263C11—H110.9300
O2i—Cd1—O2107.31 (15)C6—C1—S2119.3 (4)
O2i—Cd1—N3i145.88 (11)C2—C1—S2120.2 (3)
O2—Cd1—N3i91.52 (11)C3—C2—C1118.7 (4)
O2i—Cd1—N391.52 (11)C3—C2—N1121.9 (4)
O2—Cd1—N3145.88 (11)C1—C2—N1119.3 (3)
N3i—Cd1—N387.74 (16)C4—C3—C2120.7 (4)
O2i—Cd1—N1i82.58 (10)C4—C3—H3119.6
O2—Cd1—N1i85.04 (10)C2—C3—H3119.6
N3i—Cd1—N1i70.73 (11)C5—C4—C3120.0 (4)
N3—Cd1—N1i126.32 (11)C5—C4—H4120.0
O2i—Cd1—N185.04 (10)C3—C4—H4120.0
O2—Cd1—N182.58 (10)C4—C5—C6120.4 (4)
N3i—Cd1—N1126.32 (11)C4—C5—H5119.8
N3—Cd1—N170.73 (11)C6—C5—H5119.8
N1i—Cd1—N1159.04 (16)C1—C6—C5119.6 (5)
O3—S2—O1115.11 (19)C1—C6—H6120.2
O3—S2—O2111.07 (17)C5—C6—H6120.2
O1—S2—O2111.26 (18)N3—C7—C8121.7 (4)
O3—S2—C1107.40 (18)N3—C7—C12117.0 (4)
O1—S2—C1106.80 (18)C8—C7—C12121.3 (4)
O2—S2—C1104.47 (17)C9—C8—C7118.8 (4)
C12—N1—C2120.8 (3)C9—C8—H8120.6
C12—N1—Cd1114.4 (3)C7—C8—H8120.6
C2—N1—Cd1124.8 (2)C10—C9—C8119.4 (4)
N1—C12—C7121.1 (4)C10—C9—H9120.3
N1—C12—H12119.5C8—C9—H9120.3
C7—C12—H12119.5C11—C10—C9119.2 (4)
C11—N3—C7118.2 (3)C11—C10—H10120.4
C11—N3—Cd1124.8 (3)C9—C10—H10120.4
C7—N3—Cd1116.9 (3)N3—C11—C10122.7 (4)
S2—O2—Cd1115.56 (15)N3—C11—H11118.6
H1W—O4—H2W105.8C10—C11—H11118.6
C6—C1—C2120.5 (4)
O2i—Cd1—N1—C1293.5 (3)O2—S2—C1—C6−113.1 (3)
O2—Cd1—N1—C12−158.3 (3)O3—S2—C1—C2−174.9 (3)
N3i—Cd1—N1—C12−71.9 (3)O1—S2—C1—C2−50.9 (3)
N3—Cd1—N1—C120.1 (3)O2—S2—C1—C267.1 (3)
N1i—Cd1—N1—C12147.4 (3)C6—C1—C2—C3−1.2 (6)
O2i—Cd1—N1—C2−82.9 (3)S2—C1—C2—C3178.6 (3)
O2—Cd1—N1—C225.3 (3)C6—C1—C2—N1175.8 (3)
N3i—Cd1—N1—C2111.7 (3)S2—C1—C2—N1−4.3 (5)
N3—Cd1—N1—C2−176.3 (3)C12—N1—C2—C3−39.6 (5)
N1i—Cd1—N1—C2−29.0 (3)Cd1—N1—C2—C3136.5 (3)
C2—N1—C12—C7175.6 (3)C12—N1—C2—C1143.4 (4)
Cd1—N1—C12—C7−0.9 (5)Cd1—N1—C2—C1−40.4 (4)
O2i—Cd1—N3—C1191.9 (3)C1—C2—C3—C41.4 (6)
O2—Cd1—N3—C11−143.3 (3)N1—C2—C3—C4−175.5 (4)
N3i—Cd1—N3—C11−53.9 (3)C2—C3—C4—C5−0.4 (7)
N1i—Cd1—N3—C1110.0 (4)C3—C4—C5—C6−0.9 (7)
N1—Cd1—N3—C11176.1 (3)C2—C1—C6—C5−0.1 (6)
O2i—Cd1—N3—C7−83.5 (3)S2—C1—C6—C5−179.9 (3)
O2—Cd1—N3—C741.3 (4)C4—C5—C6—C11.1 (7)
N3i—Cd1—N3—C7130.7 (3)C11—N3—C7—C80.9 (6)
N1i—Cd1—N3—C7−165.4 (2)Cd1—N3—C7—C8176.6 (3)
N1—Cd1—N3—C70.7 (3)C11—N3—C7—C12−177.2 (4)
O3—S2—O2—Cd1168.04 (16)Cd1—N3—C7—C12−1.4 (4)
O1—S2—O2—Cd138.4 (2)N1—C12—C7—N31.6 (6)
C1—S2—O2—Cd1−76.5 (2)N1—C12—C7—C8−176.5 (4)
O2i—Cd1—O2—S2118.00 (19)N3—C7—C8—C9−1.3 (6)
N3i—Cd1—O2—S2−90.86 (18)C12—C7—C8—C9176.7 (4)
N3—Cd1—O2—S2−2.6 (3)C7—C8—C9—C100.6 (7)
N1i—Cd1—O2—S2−161.36 (19)C8—C9—C10—C110.4 (7)
N1—Cd1—O2—S235.59 (17)C7—N3—C11—C100.2 (6)
O3—S2—C1—C64.9 (4)Cd1—N3—C11—C10−175.2 (3)
O1—S2—C1—C6128.9 (3)C9—C10—C11—N3−0.9 (7)
D—H···AD—HH···AD···AD—H···A
O4—H2W···O3ii0.832.272.968 (5)142
O4—H1W···O10.852.012.863 (5)179
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H2W⋯O3i0.832.272.968 (5)142
O4—H1W⋯O10.852.012.863 (5)179

Symmetry code: (i) .

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-26

3.  Bis[2-(2-pyridylmethyl-eneamino)benzene-sulfonato-κN,N',O]cobalt(II) dihydrate.

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