| Literature DB >> 21580897 |
Hong-Feng Chen1, Qi Fang, Wen-Tao Yu.
Abstract
The title compound, [Ni(C(5)O(5))(C(10)H(8)N(2))(2)], lies across a crystallographic twofold axis, around which two 2,2'-bipyridine (2,2'-bipy) ligands are arranged in a propeller manner. The local geometry of the NiN(4)O(2) coordination core basically adopts an octa-hedral geometry. The mol-ecular twofold axis is along the direction of the mol-ecular dipole moment, and the complex is packed with its dipole moment alternately along the +b and -b directions. The crystal structure is stabilized by inter-molecular C-H⋯O hydrogen bonds.Entities:
Year: 2008 PMID: 21580897 PMCID: PMC2959560 DOI: 10.1107/S1600536808033771
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C5O5)(C10H8N2)2] | |
| Orthorhombic, | Mo |
| Hall symbol: -P_2n 2ab | Cell parameters from 2518 reflections |
| θ = 2.5–23.4° | |
| µ = 0.95 mm−1 | |
| Prism, green-yellow | |
| 0.20 × 0.19 × 0.10 mm |
| Bruker APEXII CCD diffractometer | 2466 independent reflections |
| Radiation source: fine-focus sealed tube | 1536 reflections with |
| graphite | |
| Detector resolution: 10.0 pixels mm-1 | θmax = 27.5°, θmin = 2.5° |
| φ and ω scans | |
| Absorption correction: multi-scan (APEX2; Bruker, 2005) | |
| 10055 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2466 reflections | (Δ/σ)max < 0.001 |
| 160 parameters | Δρmax = 0.26 e Å−3 |
| 0 restraints | Δρmin = −0.38 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Ni1 | 0.5000 | 0.46011 (4) | 0.2500 | 0.03546 (17) | |
| O1 | 0.56048 (15) | 0.31353 (15) | 0.17633 (10) | 0.0439 (5) | |
| O2 | 0.6016 (2) | 0.0512 (2) | 0.12408 (16) | 0.1053 (10) | |
| O3 | 0.5000 | −0.1097 (3) | 0.2500 | 0.0700 (9) | |
| N1 | 0.45364 (18) | 0.58822 (19) | 0.34037 (12) | 0.0397 (5) | |
| N2 | 0.63184 (17) | 0.46676 (19) | 0.32573 (12) | 0.0419 (6) | |
| C1 | 0.3650 (3) | 0.6535 (3) | 0.34092 (17) | 0.0531 (8) | |
| H1 | 0.3173 | 0.6410 | 0.2970 | 0.064* | |
| C2 | 0.3402 (3) | 0.7384 (3) | 0.4029 (2) | 0.0717 (10) | |
| H2 | 0.2774 | 0.7824 | 0.4013 | 0.086* | |
| C3 | 0.4114 (4) | 0.7561 (3) | 0.4673 (2) | 0.0742 (11) | |
| H3 | 0.3977 | 0.8142 | 0.5097 | 0.089* | |
| C4 | 0.5025 (3) | 0.6888 (3) | 0.46926 (18) | 0.0570 (9) | |
| H4 | 0.5502 | 0.6989 | 0.5135 | 0.068* | |
| C5 | 0.5226 (2) | 0.6052 (2) | 0.40425 (15) | 0.0406 (7) | |
| C6 | 0.6200 (2) | 0.5320 (2) | 0.39824 (16) | 0.0431 (7) | |
| C7 | 0.6964 (3) | 0.5264 (3) | 0.4613 (2) | 0.0638 (9) | |
| H7 | 0.6872 | 0.5696 | 0.5119 | 0.077* | |
| C8 | 0.7854 (3) | 0.4569 (4) | 0.4486 (2) | 0.0770 (12) | |
| H8 | 0.8367 | 0.4526 | 0.4906 | 0.092* | |
| C9 | 0.7982 (2) | 0.3940 (3) | 0.3737 (2) | 0.0679 (10) | |
| H9 | 0.8587 | 0.3479 | 0.3633 | 0.081* | |
| C10 | 0.7195 (2) | 0.4008 (3) | 0.31437 (19) | 0.0575 (8) | |
| H10 | 0.7276 | 0.3572 | 0.2637 | 0.069* | |
| C11 | 0.5300 (2) | 0.2129 (3) | 0.21214 (15) | 0.0393 (6) | |
| C12 | 0.5511 (3) | 0.0864 (3) | 0.18605 (18) | 0.0530 (8) | |
| C13 | 0.5000 | 0.0035 (4) | 0.2500 | 0.0487 (10) |
| Ni1 | 0.0404 (3) | 0.0388 (3) | 0.0271 (2) | 0.000 | −0.0053 (2) | 0.000 |
| O1 | 0.0587 (13) | 0.0418 (11) | 0.0310 (9) | −0.0040 (10) | 0.0083 (9) | 0.0013 (8) |
| O2 | 0.167 (3) | 0.0586 (15) | 0.0903 (17) | −0.0026 (15) | 0.0769 (19) | −0.0177 (13) |
| O3 | 0.086 (2) | 0.0405 (17) | 0.084 (2) | 0.000 | 0.0118 (18) | 0.000 |
| N1 | 0.0510 (14) | 0.0360 (12) | 0.0322 (11) | −0.0008 (12) | −0.0020 (11) | 0.0015 (10) |
| N2 | 0.0437 (14) | 0.0480 (14) | 0.0340 (12) | 0.0003 (12) | −0.0082 (10) | 0.0017 (10) |
| C1 | 0.064 (2) | 0.0507 (18) | 0.0443 (16) | 0.0138 (17) | 0.0003 (16) | 0.0011 (14) |
| C2 | 0.098 (3) | 0.057 (2) | 0.060 (2) | 0.024 (2) | 0.022 (2) | −0.0018 (17) |
| C3 | 0.119 (3) | 0.048 (2) | 0.056 (2) | −0.002 (2) | 0.028 (2) | −0.0121 (16) |
| C4 | 0.084 (2) | 0.0514 (17) | 0.0359 (15) | −0.022 (2) | 0.0095 (16) | −0.0076 (13) |
| C5 | 0.0582 (19) | 0.0341 (14) | 0.0295 (13) | −0.0130 (14) | 0.0012 (12) | 0.0026 (11) |
| C6 | 0.0535 (18) | 0.0442 (16) | 0.0317 (14) | −0.0198 (15) | −0.0080 (13) | 0.0070 (13) |
| C7 | 0.076 (2) | 0.068 (2) | 0.0482 (18) | −0.023 (2) | −0.0272 (17) | 0.0038 (15) |
| C8 | 0.065 (2) | 0.090 (3) | 0.076 (3) | −0.023 (2) | −0.041 (2) | 0.033 (2) |
| C9 | 0.0442 (18) | 0.080 (3) | 0.079 (2) | 0.0036 (19) | −0.0144 (18) | 0.026 (2) |
| C10 | 0.0494 (19) | 0.067 (2) | 0.0555 (19) | 0.0078 (18) | −0.0081 (15) | 0.0055 (16) |
| C11 | 0.0431 (17) | 0.0439 (16) | 0.0309 (13) | −0.0025 (14) | −0.0005 (11) | −0.0019 (12) |
| C12 | 0.066 (2) | 0.0462 (17) | 0.0463 (17) | −0.0038 (17) | 0.0129 (16) | −0.0085 (14) |
| C13 | 0.052 (2) | 0.042 (2) | 0.052 (2) | 0.000 | 0.000 (2) | 0.000 |
| Ni1—N2 | 2.059 (2) | C3—C4 | 1.367 (4) |
| Ni1—N2i | 2.059 (2) | C3—H3 | 0.9300 |
| Ni1—N1 | 2.066 (2) | C4—C5 | 1.385 (4) |
| Ni1—N1i | 2.066 (2) | C4—H4 | 0.9300 |
| Ni1—O1i | 2.1022 (18) | C5—C6 | 1.472 (4) |
| Ni1—O1 | 2.1022 (18) | C6—C7 | 1.389 (4) |
| O1—C11 | 1.280 (3) | C7—C8 | 1.371 (5) |
| O2—C12 | 1.227 (3) | C7—H7 | 0.9300 |
| O3—C13 | 1.217 (5) | C8—C9 | 1.369 (5) |
| N1—C1 | 1.328 (3) | C8—H8 | 0.9300 |
| N1—C5 | 1.347 (3) | C9—C10 | 1.370 (4) |
| N2—C10 | 1.334 (3) | C9—H9 | 0.9300 |
| N2—C6 | 1.347 (3) | C10—H10 | 0.9300 |
| C1—C2 | 1.372 (4) | C11—C11i | 1.415 (5) |
| C1—H1 | 0.9300 | C11—C12 | 1.446 (4) |
| C2—C3 | 1.373 (5) | C12—C13 | 1.493 (4) |
| C2—H2 | 0.9300 | C13—C12i | 1.493 (4) |
| N2—Ni1—N2i | 176.02 (12) | C3—C4—C5 | 118.9 (3) |
| N2—Ni1—N1 | 79.12 (9) | C3—C4—H4 | 120.6 |
| N2i—Ni1—N1 | 98.19 (8) | C5—C4—H4 | 120.6 |
| N2—Ni1—N1i | 98.19 (8) | N1—C5—C4 | 121.3 (3) |
| N2i—Ni1—N1i | 79.12 (9) | N1—C5—C6 | 115.4 (2) |
| N1—Ni1—N1i | 96.35 (11) | C4—C5—C6 | 123.3 (3) |
| N2—Ni1—O1i | 90.30 (8) | N2—C6—C7 | 120.2 (3) |
| N2i—Ni1—O1i | 92.68 (8) | N2—C6—C5 | 115.3 (2) |
| N1—Ni1—O1i | 90.91 (8) | C7—C6—C5 | 124.5 (3) |
| N1i—Ni1—O1i | 169.72 (7) | C8—C7—C6 | 119.8 (3) |
| N2—Ni1—O1 | 92.68 (8) | C8—C7—H7 | 120.1 |
| N2i—Ni1—O1 | 90.30 (8) | C6—C7—H7 | 120.1 |
| N1—Ni1—O1 | 169.72 (7) | C9—C8—C7 | 119.5 (3) |
| N1i—Ni1—O1 | 90.91 (8) | C9—C8—H8 | 120.2 |
| O1i—Ni1—O1 | 82.88 (10) | C7—C8—H8 | 120.2 |
| C11—O1—Ni1 | 106.29 (15) | C8—C9—C10 | 118.2 (3) |
| C1—N1—C5 | 118.5 (2) | C8—C9—H9 | 120.9 |
| C1—N1—Ni1 | 126.82 (19) | C10—C9—H9 | 120.9 |
| C5—N1—Ni1 | 114.72 (18) | N2—C10—C9 | 123.2 (3) |
| C10—N2—C6 | 118.9 (2) | N2—C10—H10 | 118.4 |
| C10—N2—Ni1 | 125.83 (19) | C9—C10—H10 | 118.4 |
| C6—N2—Ni1 | 114.66 (19) | O1—C11—C11i | 122.26 (14) |
| N1—C1—C2 | 123.5 (3) | O1—C11—C12 | 127.9 (2) |
| N1—C1—H1 | 118.3 | C11i—C11—C12 | 109.83 (15) |
| C2—C1—H1 | 118.3 | O2—C12—C11 | 127.8 (3) |
| C1—C2—C3 | 117.7 (3) | O2—C12—C13 | 125.4 (3) |
| C1—C2—H2 | 121.1 | C11—C12—C13 | 106.8 (2) |
| C3—C2—H2 | 121.1 | O3—C13—C12i | 126.64 (17) |
| C4—C3—C2 | 120.2 (3) | O3—C13—C12 | 126.64 (17) |
| C4—C3—H3 | 119.9 | C12i—C13—C12 | 106.7 (3) |
| C2—C3—H3 | 119.9 | ||
| N2—Ni1—O1—C11 | 90.49 (17) | C1—N1—C5—C6 | −178.6 (2) |
| N2i—Ni1—O1—C11 | −92.14 (18) | Ni1—N1—C5—C6 | 1.2 (3) |
| N1—Ni1—O1—C11 | 53.7 (5) | C3—C4—C5—N1 | −1.0 (4) |
| N1i—Ni1—O1—C11 | −171.27 (17) | C3—C4—C5—C6 | 177.3 (3) |
| O1i—Ni1—O1—C11 | 0.52 (13) | C10—N2—C6—C7 | −2.5 (4) |
| N2—Ni1—N1—C1 | 174.7 (2) | Ni1—N2—C6—C7 | 169.1 (2) |
| N2i—Ni1—N1—C1 | −2.3 (2) | C10—N2—C6—C5 | 178.1 (2) |
| N1i—Ni1—N1—C1 | 77.5 (2) | Ni1—N2—C6—C5 | −10.3 (3) |
| O1i—Ni1—N1—C1 | −95.2 (2) | N1—C5—C6—N2 | 6.1 (3) |
| O1—Ni1—N1—C1 | −147.8 (4) | C4—C5—C6—N2 | −172.3 (2) |
| N2—Ni1—N1—C5 | −5.04 (17) | N1—C5—C6—C7 | −173.3 (2) |
| N2i—Ni1—N1—C5 | 177.93 (18) | C4—C5—C6—C7 | 8.3 (4) |
| N1i—Ni1—N1—C5 | −102.20 (19) | N2—C6—C7—C8 | 1.8 (4) |
| O1i—Ni1—N1—C5 | 85.09 (18) | C5—C6—C7—C8 | −178.8 (3) |
| O1—Ni1—N1—C5 | 32.5 (5) | C6—C7—C8—C9 | 0.2 (5) |
| N1—Ni1—N2—C10 | 179.3 (2) | C7—C8—C9—C10 | −1.5 (5) |
| N1i—Ni1—N2—C10 | −85.7 (2) | C6—N2—C10—C9 | 1.2 (4) |
| O1i—Ni1—N2—C10 | 88.5 (2) | Ni1—N2—C10—C9 | −169.4 (2) |
| O1—Ni1—N2—C10 | 5.6 (2) | C8—C9—C10—N2 | 0.8 (5) |
| N1—Ni1—N2—C6 | 8.43 (17) | Ni1—O1—C11—C11i | −1.5 (4) |
| N1i—Ni1—N2—C6 | 103.37 (17) | Ni1—O1—C11—C12 | −179.9 (2) |
| O1i—Ni1—N2—C6 | −82.44 (17) | O1—C11—C12—O2 | −0.7 (5) |
| O1—Ni1—N2—C6 | −165.32 (17) | C11i—C11—C12—O2 | −179.3 (3) |
| C5—N1—C1—C2 | 0.6 (4) | O1—C11—C12—C13 | 178.9 (2) |
| Ni1—N1—C1—C2 | −179.1 (2) | C11i—C11—C12—C13 | 0.3 (4) |
| N1—C1—C2—C3 | 0.1 (5) | O2—C12—C13—O3 | −0.6 (4) |
| C1—C2—C3—C4 | −1.2 (5) | C11—C12—C13—O3 | 179.89 (13) |
| C2—C3—C4—C5 | 1.7 (5) | O2—C12—C13—C12i | 179.4 (4) |
| C1—N1—C5—C4 | −0.1 (4) | C11—C12—C13—C12i | −0.11 (13) |
| Ni1—N1—C5—C4 | 179.63 (19) |
| H··· | ||||
| C4—H4···O1ii | 0.93 | 2.57 | 3.340 (4) | 141 |
| C8—H8···O2iii | 0.93 | 2.24 | 3.114 (4) | 156 |
| C9—H9···O3iv | 0.93 | 2.57 | 3.222 (4) | 127 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C4—H4⋯O1i | 0.93 | 2.57 | 3.340 (4) | 141 |
| C8—H8⋯O2ii | 0.93 | 2.24 | 3.114 (4) | 156 |
| C9—H9⋯O3iii | 0.93 | 2.57 | 3.222 (4) | 127 |
Symmetry codes: (i) ; (ii) ; (iii) .