Literature DB >> 21580863

catena-Poly[[[aqua-(pyridine-2,6-dicarboxyl-ato N-oxide-κO,O)cobalt(II)]-μ-1,3-di-4-pyridylpropane-κN:N'] dihydrate].

Li-Jin Wang1.   

Abstract

In the title compound, {[Co(C(7)H(3)NO(5))(C(13)H(14)N(2))(H(2)O)]·2H(2)O}(n), the Co(II) atom is coordinated by two O atoms from a pyridine-2,6-dicarboxyl-ate N-oxide ligand, two N atoms from two 1,3-di-4-pyridylpropane ligands and one water mol-ecule, and displays a distorted square-pyramidal coordination geometry. The 1,3-di-4-pyridylpropane ligands link the Co(II) atoms into an infinite zigzag chain parallel to [010]. The chains are further linked through O-H⋯O and C-H⋯O hydrogen bonds, forming a three-dimensional supra-molecular network.

Entities:  

Year:  2008        PMID: 21580863      PMCID: PMC2959606          DOI: 10.1107/S1600536808032741

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature on metal complexes with pyridine-2,6-dicarboxyl­ate N-oxide, see: Nathan et al. (1985 ▶); Wen et al. (2005 ▶, 2006 ▶); Wu et al. (2007 ▶). For related literature on metal complexes with 1,3-di-4-pyridylpropane, see: Konar et al. (2003 ▶); Lai & Tiekink (2004 ▶); Li et al. (2004 ▶).

Experimental

Crystal data

[Co(C7H3NO5)(C13H14N2)(H2O)]·2H2O M = 492.34 Monoclinic, a = 10.2712 (12) Å b = 11.5251 (13) Å c = 18.309 (2) Å β = 90.521 (2)° V = 2167.3 (4) Å3 Z = 4 Mo Kα radiation μ = 0.84 mm−1 T = 296 (2) K 0.35 × 0.29 × 0.25 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.751, T max = 0.817 10818 measured reflections 3897 independent reflections 2170 reflections with I > 2σ(I) R int = 0.064

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.175 S = 1.00 3897 reflections 290 parameters 9 restraints H-atom parameters constrained Δρmax = 0.66 e Å−3 Δρmin = −0.40 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808032741/hy2158sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808032741/hy2158Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(C7H3NO5)(C13H14N2)(H2O)]·2H2OF(000) = 1020
Mr = 492.34Dx = 1.509 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5837 reflections
a = 10.2712 (12) Åθ = 2.8–27.9°
b = 11.5251 (13) ŵ = 0.84 mm1
c = 18.309 (2) ÅT = 296 K
β = 90.521 (2)°Block, colorless
V = 2167.3 (4) Å30.35 × 0.29 × 0.25 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer3897 independent reflections
Radiation source: fine-focus sealed tube2170 reflections with I > 2σ(I)
graphiteRint = 0.064
φ and ω scansθmax = 25.2°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −12→12
Tmin = 0.751, Tmax = 0.817k = −13→13
10818 measured reflectionsl = −20→21
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.059H-atom parameters constrained
wR(F2) = 0.175w = 1/[σ2(Fo2) + (0.0828P)2] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
3897 reflectionsΔρmax = 0.66 e Å3
290 parametersΔρmin = −0.40 e Å3
9 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0030 (8)
xyzUiso*/Ueq
O40.3287 (4)−0.0221 (4)0.4108 (2)0.0776 (13)
N30.2102 (4)1.1756 (4)0.1902 (2)0.0519 (11)
C190.2965 (6)1.0894 (5)0.1927 (3)0.0622 (16)
H190.37291.10090.21940.075*
C200.2794 (6)0.9841 (5)0.1583 (3)0.0609 (15)
H200.34320.92720.16210.073*
C180.1003 (5)1.1549 (5)0.1514 (3)0.0568 (15)
H180.03761.21290.14860.068*
C170.0769 (6)1.0515 (5)0.1159 (3)0.0597 (15)
H17−0.00071.04110.09020.072*
C160.1677 (5)0.9631 (5)0.1180 (3)0.0565 (14)
C150.1470 (6)0.8479 (5)0.0794 (3)0.0647 (16)
H15A0.18420.85320.03100.078*
H15B0.19480.78850.10590.078*
Co10.24328 (6)0.32149 (5)0.24652 (3)0.0423 (3)
O50.2788 (4)0.2215 (3)0.32898 (19)0.0565 (10)
N20.1568 (4)0.4237 (4)0.1728 (2)0.0522 (11)
O20.2658 (5)0.5550 (4)0.4120 (2)0.0892 (15)
O10.2384 (4)0.4531 (3)0.3113 (2)0.0777 (13)
O30.4937 (4)0.0354 (3)0.3417 (2)0.0761 (12)
C60.3381 (5)0.3644 (5)0.4174 (3)0.0513 (14)
C120.1618 (6)0.5381 (5)0.0652 (3)0.0593 (15)
H120.20430.55750.02230.071*
N10.3424 (4)0.2545 (4)0.3900 (2)0.0494 (11)
C30.4691 (6)0.1910 (6)0.4901 (3)0.0702 (18)
H30.51560.13260.51370.084*
C70.2755 (6)0.4653 (5)0.3766 (3)0.0607 (15)
C20.4082 (5)0.1683 (5)0.4248 (3)0.0496 (13)
C13−0.0066 (6)0.6897 (4)0.0347 (3)0.0660 (17)
H13A−0.09810.67500.02520.079*
H13B0.03810.6903−0.01170.079*
C100.0487 (5)0.5928 (5)0.0824 (3)0.0540 (14)
C10.4076 (6)0.0499 (5)0.3885 (3)0.0559 (14)
C50.3971 (6)0.3843 (5)0.4831 (3)0.0664 (16)
H50.39310.45850.50290.080*
C110.2145 (5)0.4541 (5)0.1107 (3)0.0547 (14)
H110.29180.41800.09760.066*
C80.0451 (6)0.4774 (5)0.1890 (3)0.0675 (17)
H80.00370.45770.23220.081*
C40.4619 (6)0.2997 (6)0.5211 (3)0.0730 (18)
H40.49990.31500.56630.088*
C9−0.0109 (6)0.5589 (5)0.1456 (3)0.0653 (16)
H9−0.08990.59180.15870.078*
C140.0088 (6)0.8095 (4)0.0717 (3)0.0641 (17)
H14A−0.03870.86670.04320.077*
H14B−0.02990.80640.11980.077*
O1W0.4465 (4)0.3311 (4)0.2130 (3)0.0969 (16)
H1W0.47670.39440.20110.145*
H2W0.48910.30340.24710.145*
O2W0.6417 (5)0.2145 (5)0.2840 (3)0.1170 (19)
H3W0.66690.17240.24940.175*
H4W0.58870.17530.30840.175*
O3W0.2003 (5)0.7719 (5)0.3494 (4)0.141 (2)
H5W0.22810.70610.36180.212*
H6W0.21900.82200.37950.212*
U11U22U33U12U13U23
O40.089 (3)0.053 (3)0.091 (3)−0.012 (2)0.005 (2)0.013 (2)
N30.058 (3)0.044 (3)0.053 (3)0.005 (2)−0.012 (2)0.000 (2)
C190.074 (4)0.043 (4)0.069 (4)0.008 (3)−0.015 (3)−0.002 (3)
C200.066 (4)0.045 (4)0.071 (4)0.008 (3)−0.010 (3)−0.005 (3)
C180.061 (4)0.038 (3)0.071 (4)0.006 (3)−0.012 (3)0.002 (3)
C170.070 (4)0.038 (3)0.071 (4)−0.008 (3)−0.014 (3)−0.004 (3)
C160.067 (4)0.043 (3)0.059 (3)0.003 (3)−0.002 (3)−0.003 (3)
C150.080 (4)0.045 (4)0.069 (4)−0.005 (3)−0.003 (3)−0.004 (3)
Co10.0543 (5)0.0245 (4)0.0478 (4)0.0021 (3)−0.0085 (3)0.0006 (3)
O50.075 (3)0.040 (2)0.054 (2)0.0000 (19)−0.0150 (19)−0.0013 (18)
N20.059 (3)0.042 (3)0.056 (3)0.001 (2)−0.002 (2)−0.003 (2)
O20.133 (4)0.046 (3)0.088 (3)0.019 (3)−0.033 (3)−0.024 (2)
O10.121 (4)0.039 (2)0.072 (3)0.010 (2)−0.026 (3)−0.005 (2)
O30.074 (3)0.048 (3)0.107 (3)0.005 (2)0.022 (3)−0.008 (2)
C60.055 (3)0.040 (3)0.059 (3)0.007 (3)−0.009 (3)−0.008 (3)
C120.080 (4)0.048 (4)0.050 (3)−0.005 (3)−0.001 (3)0.002 (3)
N10.055 (3)0.040 (3)0.053 (3)0.001 (2)−0.007 (2)0.002 (2)
C30.076 (4)0.066 (5)0.068 (4)0.010 (3)−0.018 (3)0.010 (3)
C70.071 (4)0.045 (4)0.066 (4)0.009 (3)−0.011 (3)−0.013 (3)
C20.050 (3)0.044 (3)0.055 (3)0.004 (3)−0.001 (3)0.004 (3)
C130.087 (4)0.042 (3)0.069 (4)0.003 (3)−0.027 (3)0.003 (3)
C100.059 (3)0.037 (3)0.066 (4)0.001 (3)−0.013 (3)−0.003 (3)
C10.064 (4)0.041 (4)0.062 (4)0.007 (3)−0.013 (3)0.008 (3)
C50.086 (4)0.047 (4)0.066 (4)0.006 (3)−0.014 (3)−0.008 (3)
C110.058 (3)0.048 (4)0.058 (3)0.008 (3)0.000 (3)−0.003 (3)
C80.068 (4)0.065 (4)0.070 (4)0.015 (3)0.008 (3)0.009 (3)
C40.088 (5)0.065 (4)0.066 (4)−0.001 (4)−0.029 (3)−0.004 (3)
C90.068 (4)0.056 (4)0.072 (4)0.015 (3)0.006 (3)0.012 (3)
C140.078 (4)0.033 (3)0.081 (4)−0.004 (3)−0.027 (3)0.005 (3)
O1W0.074 (3)0.070 (3)0.147 (4)−0.008 (2)−0.002 (3)0.047 (3)
O2W0.116 (4)0.098 (4)0.136 (5)−0.009 (3)−0.017 (3)0.034 (4)
O3W0.115 (4)0.075 (4)0.233 (7)−0.015 (3)−0.046 (4)0.024 (4)
O4—C11.232 (7)C12—C101.361 (7)
N3—C191.332 (6)C12—C111.384 (7)
N3—C181.348 (6)C12—H120.9300
N3—Co1i2.000 (4)N1—C21.358 (6)
C19—C201.378 (7)C3—C21.370 (7)
C19—H190.9300C3—C41.377 (8)
C20—C161.379 (7)C3—H30.9300
C20—H200.9300C2—C11.518 (7)
C18—C171.378 (7)C13—C101.524 (7)
C18—H180.9300C13—C141.545 (7)
C17—C161.381 (7)C13—H13A0.9700
C17—H170.9300C13—H13B0.9700
C16—C151.519 (7)C10—C91.371 (7)
C15—C141.492 (7)C5—C41.368 (8)
C15—H15A0.9700C5—H50.9300
C15—H15B0.9700C11—H110.9300
Co1—O11.927 (4)C8—C91.354 (7)
Co1—O51.932 (3)C8—H80.9300
Co1—N21.994 (4)C4—H40.9300
Co1—N3ii2.000 (4)C9—H90.9300
Co1—O1W2.184 (4)C14—H14A0.9700
O5—N11.344 (5)C14—H14B0.9700
N2—C111.334 (6)O1W—H1W0.8200
N2—C81.339 (6)O1W—H2W0.8200
O2—C71.224 (6)O2W—H3W0.8400
O1—C71.259 (6)O2W—H4W0.8400
O3—C11.248 (7)O3W—H6W0.8200
C6—C51.361 (7)O3W—H5W0.8400
C6—N11.363 (6)O3W—H6W0.8200
C6—C71.522 (7)
C19—N3—C18116.1 (5)C2—C3—C4120.5 (6)
C19—N3—Co1i119.9 (4)C2—C3—H3119.7
C18—N3—Co1i123.9 (4)C4—C3—H3119.7
N3—C19—C20123.9 (5)O2—C7—O1124.8 (6)
N3—C19—H19118.0O2—C7—C6115.0 (5)
C20—C19—H19118.0O1—C7—C6120.2 (5)
C16—C20—C19120.1 (5)N1—C2—C3119.4 (5)
C16—C20—H20119.9N1—C2—C1116.9 (4)
C19—C20—H20119.9C3—C2—C1123.7 (5)
N3—C18—C17122.9 (5)C10—C13—C14111.6 (4)
N3—C18—H18118.5C10—C13—H13A109.3
C17—C18—H18118.5C14—C13—H13A109.3
C18—C17—C16120.6 (5)C10—C13—H13B109.3
C18—C17—H17119.7C14—C13—H13B109.3
C16—C17—H17119.7H13A—C13—H13B108.0
C20—C16—C17116.3 (5)C12—C10—C9116.8 (5)
C20—C16—C15121.0 (5)C12—C10—C13121.4 (5)
C17—C16—C15122.7 (5)C9—C10—C13121.8 (5)
C14—C15—C16115.6 (5)O4—C1—O3127.6 (6)
C14—C15—H15A108O4—C1—C2117.4 (6)
C16—C15—H15A108O3—C1—C2114.9 (5)
C14—C15—H15B108C6—C5—C4122.7 (6)
C16—C15—H15B108C6—C5—H5118.7
H15A—C15—H15B107C4—C5—H5118.7
O1—Co1—O589.67 (16)N2—C11—C12121.5 (5)
O1—Co1—N286.43 (16)N2—C11—H11119.3
O5—Co1—N2164.02 (17)C12—C11—H11119.3
O1—Co1—N3ii166.97 (19)N2—C8—C9123.4 (6)
O5—Co1—N3ii86.08 (16)N2—C8—H8118.3
N2—Co1—N3ii94.30 (16)C9—C8—H8118.3
O1—Co1—O1W99.39 (19)C5—C4—C3117.8 (5)
O5—Co1—O1W94.32 (16)C5—C4—H4121.1
N2—Co1—O1W101.61 (17)C3—C4—H4121.1
N3ii—Co1—O1W93.21 (18)C8—C9—C10120.2 (6)
N1—O5—Co1124.5 (3)C8—C9—H9119.9
C11—N2—C8117.0 (5)C10—C9—H9119.9
C11—N2—Co1122.3 (4)C15—C14—C13113.6 (5)
C8—N2—Co1120.1 (4)C15—C14—H14A108.9
C7—O1—Co1131.5 (4)C13—C14—H14A108.9
C5—C6—N1117.8 (5)C15—C14—H14B108.9
C5—C6—C7119.1 (5)C13—C14—H14B108.9
N1—C6—C7123.0 (4)H14A—C14—H14B107.7
C10—C12—C11121.0 (5)Co1—O1W—H1W118.8
C10—C12—H12119.5Co1—O1W—H2W105.7
C11—C12—H12119.5H1W—O1W—H2W110
O5—N1—C2114.7 (4)H3W—O2W—H4W107
O5—N1—C6123.5 (4)H5W—O3W—H6W112
C2—N1—C6121.7 (4)
D—H···AD—HH···AD···AD—H···A
O1W—H1W···O3iii0.821.832.635 (5)165
O1W—H2W···O2W0.821.992.732 (6)150
O2W—H3W···O3Wiv0.842.553.018 (9)117
O2W—H4W···O30.841.982.778 (6)157
O3W—H5W···O20.842.012.828 (7)166
O3W—H6W···O4i0.822.192.935 (7)150
C3—H3···O4v0.932.463.364 (8)165
C9—H9···O5vi0.932.463.366 (7)164
C15—H15A···O2vii0.972.573.492 (7)159
C18—H18···O3Wvi0.932.553.369 (7)149
Table 1

Selected bond lengths (Å)

Co1—O11.927 (4)
Co1—O51.932 (3)
Co1—N21.994 (4)
Co1—N3i2.000 (4)
Co1—O1W2.184 (4)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1W⋯O3ii0.821.832.635 (5)165
O1W—H2W⋯O2W0.821.992.732 (6)150
O2W—H3W⋯O3Wiii0.842.553.018 (9)117
O2W—H4W⋯O30.841.982.778 (6)157
O3W—H5W⋯O20.842.012.828 (7)166
O3W—H6W⋯O4iv0.822.192.935 (7)150
C3—H3⋯O4v0.932.463.364 (8)165
C9—H9⋯O5vi0.932.463.366 (7)164
C15—H15A⋯O2vii0.972.573.492 (7)159
C18—H18⋯O3Wvi0.932.553.369 (7)149

Symmetry codes: (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .

  3 in total

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Authors:  George M Sheldrick
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3.  Syntheses, structural analyses, and magneto-structural correlations of three polymeric Fe(II) complexes with azide ligand.

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