| Literature DB >> 21580841 |
Hershel Jude, Peter S White, Dana M Dattelbaum, Reginaldo C Rocha.
Abstract
The title compound, trans-[Ru(bpy)(2)(H(2)O)(2)](CF(3)SO(3))(2) (bpy = 2,2'-bipyridine, C(10)H(8)N(2)), crystallized from the decomposition of an aged aqueous solution of a dimeric complex of cis-Ru(bpy)(2) in 0.1 M triflic acid. The Ru(II) ion is located on a crystallographic inversion center and exhibits a distorted octa-hedral coordination with equivalent ligands trans to each other. The Ru-O distance is 2.1053 (16) Å and the Ru-N distances are 2.0727 (17) and 2.0739 (17) Å. The bpy ligands are bent, due to inter-ligand steric inter-actions between H atoms of opposite pyridyl units across the Ru center. The crystal structure exhibits an extensive hydrogen-bonding network involving the water ligands and the trifluoromethane-sulfonate counter-ions within two-dimensional layers, although no close hydrogen-bond inter-actions exist between different layers.Entities:
Year: 2008 PMID: 21580841 PMCID: PMC2959720 DOI: 10.1107/S1600536808028195
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ru(C10H8N2)2(H2O)2](CF3O3S)2 | |
| Monoclinic, | Cu |
| Hall symbol: -P 2ybc | Cell parameters from 1677 reflections |
| θ = 5.0–67.3° | |
| µ = 6.88 mm−1 | |
| β = 93.095 (3)° | Plate, brown |
| 0.20 × 0.15 × 0.02 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 2538 independent reflections |
| Radiation source: fine-focus sealed tube | 2436 reflections with |
| graphite | |
| φ and ω scans | θmax = 69.7°, θmin = 5.0° |
| Absorption correction: numerical Numerical followed by SADABS (Bruker, 2007) | |
| 15574 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2538 reflections | (Δ/σ)max < 0.001 |
| 204 parameters | Δρmax = 0.69 e Å−3 |
| 0 restraints | Δρmin = −0.45 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Ru1 | 0.5000 | 0.5000 | 0.0000 | 0.01303 (9) | |
| O1 | 0.64907 (19) | 0.61137 (12) | 0.05421 (17) | 0.0181 (3) | |
| N2 | 0.6089 (2) | 0.42131 (12) | 0.13474 (15) | 0.0154 (4) | |
| C3 | 0.5507 (3) | 0.39407 (15) | 0.23786 (19) | 0.0192 (4) | |
| H3 | 0.4431 | 0.4020 | 0.2475 | 0.023* | |
| C4 | 0.6412 (3) | 0.35501 (17) | 0.3302 (2) | 0.0243 (5) | |
| H4 | 0.5965 | 0.3365 | 0.4014 | 0.029* | |
| C5 | 0.7986 (3) | 0.34355 (18) | 0.3164 (2) | 0.0271 (5) | |
| H5 | 0.8644 | 0.3208 | 0.3800 | 0.033* | |
| C6 | 0.8584 (3) | 0.36563 (17) | 0.2090 (2) | 0.0230 (5) | |
| H6 | 0.9650 | 0.3559 | 0.1970 | 0.028* | |
| C7 | 0.7606 (3) | 0.40225 (15) | 0.11871 (19) | 0.0179 (4) | |
| C8 | 0.8048 (2) | 0.41339 (15) | −0.00489 (19) | 0.0170 (4) | |
| C9 | 0.9491 (3) | 0.38753 (16) | −0.0439 (2) | 0.0208 (5) | |
| H9 | 1.0312 | 0.3708 | 0.0113 | 0.025* | |
| C10 | 0.9709 (3) | 0.38668 (17) | −0.1642 (2) | 0.0240 (5) | |
| H10 | 1.0692 | 0.3716 | −0.1926 | 0.029* | |
| C11 | 0.8470 (3) | 0.40816 (17) | −0.2426 (2) | 0.0230 (5) | |
| H11 | 0.8578 | 0.4043 | −0.3255 | 0.028* | |
| C12 | 0.7075 (3) | 0.43527 (16) | −0.19861 (19) | 0.0194 (4) | |
| H12 | 0.6233 | 0.4499 | −0.2528 | 0.023* | |
| N13 | 0.6869 (2) | 0.44164 (12) | −0.08110 (16) | 0.0160 (4) | |
| S1 | 0.31188 (6) | 0.31728 (4) | 0.61491 (5) | 0.01857 (13) | |
| C14 | 0.2290 (3) | 0.3937 (2) | 0.4986 (2) | 0.0343 (6) | |
| F15 | 0.1904 (2) | 0.34309 (16) | 0.40134 (15) | 0.0556 (5) | |
| F16 | 0.3298 (2) | 0.45966 (12) | 0.46821 (15) | 0.0458 (4) | |
| F17 | 0.1035 (2) | 0.43667 (17) | 0.53333 (18) | 0.0652 (6) | |
| O19 | 0.44116 (19) | 0.27407 (11) | 0.55926 (14) | 0.0241 (4) | |
| O20 | 0.3551 (2) | 0.38361 (12) | 0.70808 (14) | 0.0271 (4) | |
| O21 | 0.1893 (2) | 0.25354 (14) | 0.64049 (17) | 0.0360 (5) | |
| H1A | 0.644 (3) | 0.6198 (19) | 0.120 (3) | 0.016 (7)* | |
| H1B | 0.619 (4) | 0.651 (2) | 0.018 (3) | 0.033 (9)* |
| Ru1 | 0.01032 (13) | 0.01596 (13) | 0.01305 (13) | 0.00058 (8) | 0.00289 (8) | −0.00017 (7) |
| O1 | 0.0178 (8) | 0.0206 (8) | 0.0159 (9) | −0.0017 (6) | 0.0017 (6) | 0.0007 (7) |
| N2 | 0.0146 (9) | 0.0163 (8) | 0.0155 (9) | 0.0011 (7) | 0.0015 (7) | −0.0003 (7) |
| C3 | 0.0195 (11) | 0.0191 (10) | 0.0196 (11) | 0.0000 (8) | 0.0064 (9) | −0.0007 (8) |
| C4 | 0.0310 (13) | 0.0241 (11) | 0.0185 (11) | 0.0024 (9) | 0.0070 (10) | 0.0042 (9) |
| C5 | 0.0291 (14) | 0.0300 (12) | 0.0219 (11) | 0.0101 (10) | −0.0011 (10) | 0.0028 (9) |
| C6 | 0.0164 (11) | 0.0288 (12) | 0.0240 (11) | 0.0054 (9) | 0.0022 (9) | 0.0008 (9) |
| C7 | 0.0174 (11) | 0.0169 (10) | 0.0196 (11) | 0.0008 (8) | 0.0041 (9) | −0.0011 (8) |
| C8 | 0.0149 (11) | 0.0164 (10) | 0.0198 (11) | −0.0002 (8) | 0.0016 (9) | −0.0010 (8) |
| C9 | 0.0163 (11) | 0.0228 (11) | 0.0232 (11) | 0.0020 (9) | 0.0018 (9) | −0.0001 (9) |
| C10 | 0.0180 (12) | 0.0285 (12) | 0.0265 (12) | 0.0039 (9) | 0.0102 (10) | 0.0003 (9) |
| C11 | 0.0228 (12) | 0.0281 (12) | 0.0188 (11) | 0.0033 (9) | 0.0063 (9) | −0.0001 (9) |
| C12 | 0.0192 (12) | 0.0227 (11) | 0.0167 (10) | 0.0016 (9) | 0.0027 (9) | −0.0003 (8) |
| N13 | 0.0137 (9) | 0.0160 (8) | 0.0185 (9) | −0.0004 (7) | 0.0037 (7) | −0.0005 (7) |
| S1 | 0.0180 (3) | 0.0219 (3) | 0.0161 (2) | −0.0016 (2) | 0.0032 (2) | −0.00187 (19) |
| C14 | 0.0296 (15) | 0.0488 (17) | 0.0245 (13) | 0.0170 (12) | −0.0003 (11) | 0.0023 (11) |
| F15 | 0.0536 (12) | 0.0841 (14) | 0.0270 (9) | 0.0107 (10) | −0.0172 (8) | −0.0078 (9) |
| F16 | 0.0665 (12) | 0.0385 (9) | 0.0332 (9) | 0.0124 (8) | 0.0110 (8) | 0.0147 (7) |
| F17 | 0.0458 (11) | 0.0919 (16) | 0.0583 (12) | 0.0474 (11) | 0.0068 (9) | 0.0086 (11) |
| O19 | 0.0218 (9) | 0.0244 (8) | 0.0266 (8) | 0.0029 (6) | 0.0054 (7) | 0.0001 (6) |
| O20 | 0.0347 (10) | 0.0275 (9) | 0.0191 (8) | −0.0044 (7) | 0.0015 (7) | −0.0040 (7) |
| O21 | 0.0340 (11) | 0.0391 (10) | 0.0366 (10) | −0.0155 (8) | 0.0171 (8) | −0.0102 (8) |
| Ru1—N2i | 2.0727 (17) | C7—C8 | 1.479 (3) |
| Ru1—N2 | 2.0727 (17) | C8—N13 | 1.360 (3) |
| Ru1—N13i | 2.0739 (17) | C8—C9 | 1.396 (3) |
| Ru1—N13 | 2.0739 (17) | C9—C10 | 1.385 (3) |
| Ru1—O1i | 2.1053 (16) | C9—H9 | 0.9500 |
| Ru1—O1 | 2.1053 (16) | C10—C11 | 1.389 (4) |
| O1—H1A | 0.75 (3) | C10—H10 | 0.9500 |
| O1—H1B | 0.73 (4) | C11—C12 | 1.384 (3) |
| N2—C3 | 1.352 (3) | C11—H11 | 0.9500 |
| N2—C7 | 1.363 (3) | C12—N13 | 1.355 (3) |
| C3—C4 | 1.387 (3) | C12—H12 | 0.9500 |
| C3—H3 | 0.9500 | S1—O21 | 1.4334 (18) |
| C4—C5 | 1.389 (4) | S1—O20 | 1.4451 (17) |
| C4—H4 | 0.9500 | S1—O19 | 1.4486 (16) |
| C5—C6 | 1.383 (3) | S1—C14 | 1.820 (3) |
| C5—H5 | 0.9500 | C14—F17 | 1.323 (3) |
| C6—C7 | 1.391 (3) | C14—F16 | 1.334 (3) |
| C6—H6 | 0.9500 | C14—F15 | 1.340 (3) |
| N2i—Ru1—N2 | 180.00 (8) | N2—C7—C6 | 121.9 (2) |
| N2i—Ru1—N13i | 77.18 (7) | N2—C7—C8 | 113.93 (19) |
| N2—Ru1—N13i | 102.82 (7) | C6—C7—C8 | 123.8 (2) |
| N2i—Ru1—N13 | 102.82 (7) | N13—C8—C9 | 122.0 (2) |
| N2—Ru1—N13 | 77.18 (7) | N13—C8—C7 | 114.07 (18) |
| N13i—Ru1—N13 | 180.0 | C9—C8—C7 | 123.6 (2) |
| N2i—Ru1—O1i | 86.51 (7) | C10—C9—C8 | 119.0 (2) |
| N2—Ru1—O1i | 93.49 (7) | C10—C9—H9 | 120.5 |
| N13i—Ru1—O1i | 86.88 (7) | C8—C9—H9 | 120.5 |
| N13—Ru1—O1i | 93.12 (7) | C9—C10—C11 | 119.0 (2) |
| N2i—Ru1—O1 | 93.49 (7) | C9—C10—H10 | 120.5 |
| N2—Ru1—O1 | 86.51 (7) | C11—C10—H10 | 120.5 |
| N13i—Ru1—O1 | 93.12 (7) | C12—C11—C10 | 119.3 (2) |
| N13—Ru1—O1 | 86.88 (7) | C12—C11—H11 | 120.4 |
| O1i—Ru1—O1 | 180.0 | C10—C11—H11 | 120.4 |
| Ru1—O1—H1A | 110 (2) | N13—C12—C11 | 122.4 (2) |
| Ru1—O1—H1B | 102 (3) | N13—C12—H12 | 118.8 |
| H1A—O1—H1B | 113 (3) | C11—C12—H12 | 118.8 |
| C3—N2—C7 | 117.74 (19) | C12—N13—C8 | 117.98 (18) |
| C3—N2—Ru1 | 127.77 (15) | C12—N13—Ru1 | 127.48 (15) |
| C7—N2—Ru1 | 114.28 (14) | C8—N13—Ru1 | 114.35 (14) |
| N2—C3—C4 | 122.9 (2) | O21—S1—O20 | 115.16 (10) |
| N2—C3—H3 | 118.6 | O21—S1—O19 | 114.90 (11) |
| C4—C3—H3 | 118.6 | O20—S1—O19 | 114.53 (10) |
| C3—C4—C5 | 118.6 (2) | O21—S1—C14 | 104.58 (13) |
| C3—C4—H4 | 120.7 | O20—S1—C14 | 102.69 (12) |
| C5—C4—H4 | 120.7 | O19—S1—C14 | 102.65 (11) |
| C6—C5—C4 | 119.2 (2) | F17—C14—F16 | 108.4 (2) |
| C6—C5—H5 | 120.4 | F17—C14—F15 | 108.5 (2) |
| C4—C5—H5 | 120.4 | F16—C14—F15 | 107.4 (2) |
| C5—C6—C7 | 119.2 (2) | F17—C14—S1 | 110.79 (19) |
| C5—C6—H6 | 120.4 | F16—C14—S1 | 111.30 (19) |
| C7—C6—H6 | 120.4 | F15—C14—S1 | 110.4 (2) |
| N13i—Ru1—N2—C3 | 16.01 (19) | C9—C10—C11—C12 | 3.8 (4) |
| N13—Ru1—N2—C3 | −163.99 (19) | C10—C11—C12—N13 | −0.1 (4) |
| O1i—Ru1—N2—C3 | −71.58 (18) | C11—C12—N13—C8 | −5.0 (3) |
| O1—Ru1—N2—C3 | 108.42 (18) | C11—C12—N13—Ru1 | 169.81 (17) |
| N13i—Ru1—N2—C7 | −158.51 (14) | C9—C8—N13—C12 | 6.5 (3) |
| N13—Ru1—N2—C7 | 21.49 (14) | C7—C8—N13—C12 | −166.89 (19) |
| O1i—Ru1—N2—C7 | 113.90 (15) | C9—C8—N13—Ru1 | −169.01 (16) |
| O1—Ru1—N2—C7 | −66.10 (15) | C7—C8—N13—Ru1 | 17.6 (2) |
| C7—N2—C3—C4 | 5.3 (3) | N2i—Ru1—N13—C12 | −16.10 (19) |
| Ru1—N2—C3—C4 | −169.07 (17) | N2—Ru1—N13—C12 | 163.90 (19) |
| N2—C3—C4—C5 | 0.2 (4) | O1i—Ru1—N13—C12 | 71.02 (18) |
| C3—C4—C5—C6 | −4.1 (4) | O1—Ru1—N13—C12 | −108.98 (18) |
| C4—C5—C6—C7 | 2.5 (4) | N2i—Ru1—N13—C8 | 158.85 (14) |
| C3—N2—C7—C6 | −7.0 (3) | N2—Ru1—N13—C8 | −21.15 (14) |
| Ru1—N2—C7—C6 | 168.14 (17) | O1i—Ru1—N13—C8 | −114.03 (15) |
| C3—N2—C7—C8 | 166.29 (18) | O1—Ru1—N13—C8 | 65.97 (15) |
| Ru1—N2—C7—C8 | −18.6 (2) | O21—S1—C14—F17 | 57.2 (2) |
| C5—C6—C7—N2 | 3.2 (3) | O20—S1—C14—F17 | −63.4 (2) |
| C5—C6—C7—C8 | −169.4 (2) | O19—S1—C14—F17 | 177.4 (2) |
| N2—C7—C8—N13 | 0.6 (3) | O21—S1—C14—F16 | 177.87 (17) |
| C6—C7—C8—N13 | 173.7 (2) | O20—S1—C14—F16 | 57.3 (2) |
| N2—C7—C8—C9 | −172.6 (2) | O19—S1—C14—F16 | −61.9 (2) |
| C6—C7—C8—C9 | 0.5 (3) | O21—S1—C14—F15 | −63.0 (2) |
| N13—C8—C9—C10 | −2.8 (3) | O20—S1—C14—F15 | 176.41 (18) |
| C7—C8—C9—C10 | 169.9 (2) | O19—S1—C14—F15 | 57.3 (2) |
| C8—C9—C10—C11 | −2.4 (3) |
| H··· | ||||
| O1—H1B···O19ii | 0.73 (4) | 2.01 (4) | 2.727 (2) | 169 (4) |
| O1—H1A···O20iii | 0.75 (3) | 1.95 (3) | 2.695 (2) | 169 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.73 (4) | 2.01 (4) | 2.727 (2) | 169 (4) |
| O1—H1 | 0.75 (3) | 1.95 (3) | 2.695 (2) | 169 (3) |
Symmetry codes: (i) ; (ii) .