Literature DB >> 21580820

Bis(2-amino-pyridine-κN)silver(I) nitrate.

Hoong-Kun Fun, Jain John, Samuel Robinson Jebas, T Balasubramanian.   

Abstract

The asymmetric unit of the title compound, [Ag(C(5)H(6)N(2))(2)]NO(3), consists of one and a half each of both cations and anions, the other halves being generated by crystallographic inversion centres. One of the Ag(I) atoms lies on an inversion center and one of the nitrate ions is disordered across an inversion center. Each Ag(I) atom is bicoordinated in a linear geometry by two N atoms from two 2-amino-pyridine ligands. In the crystal structure, the cations and anions are linked into a two-dimensional network parallel to (001) by N-H⋯O and C-H⋯O hydrogen bonds.

Entities:  

Year:  2008        PMID: 21580820      PMCID: PMC2959721          DOI: 10.1107/S1600536808031292

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Kristiansson (2000 ▶); Windholz (1976 ▶). For related structures, see: Deng et al. (2004 ▶); Yang et al.(2004 ▶). For bond-length data, see: Allen et al.(1987 ▶); Jebas et al. (2007 ▶).

Experimental

Crystal data

[Ag(C5H6N2)2]NO3 M = 358.12 Monoclinic, a = 43.3371 (10) Å b = 5.8517 (1) Å c = 15.1632 (3) Å β = 100.502 (1)° V = 3780.91 (13) Å3 Z = 12 Mo Kα radiation μ = 1.61 mm−1 T = 100.0 (1) K 0.71 × 0.31 × 0.16 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.394, T max = 0.782 42747 measured reflections 9821 independent reflections 8093 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.075 S = 1.06 9821 reflections 293 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.91 e Å−3 Δρmin = −1.23 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808031292/ci2682sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808031292/ci2682Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ag(C5H6N2)2]NO3F(000) = 2136
Mr = 358.12Dx = 1.887 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 9946 reflections
a = 43.3371 (10) Åθ = 2.7–38.4°
b = 5.8517 (1) ŵ = 1.61 mm1
c = 15.1632 (3) ÅT = 100 K
β = 100.502 (1)°Block, yellow
V = 3780.91 (13) Å30.71 × 0.31 × 0.16 mm
Z = 12
Bruker SMART APEXII CCD area-detector diffractometer9821 independent reflections
Radiation source: fine-focus sealed tube8093 reflections with I > 2σ(I)
graphiteRint = 0.032
φ and ω scansθmax = 37.5°, θmin = 1.0°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −74→74
Tmin = 0.394, Tmax = 0.783k = −9→9
42747 measured reflectionsl = −25→25
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.075H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0208P)2 + 7.8111P] where P = (Fo2 + 2Fc2)/3
9821 reflections(Δ/σ)max = 0.001
293 parametersΔρmax = 0.91 e Å3
3 restraintsΔρmin = −1.23 e Å3
Experimental. The data was collected with the Oxford Cyrosystem Cobra low-temperature attachment.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Ag10.167632 (4)0.28414 (2)0.419586 (9)0.03102 (4)
Ag20.00000.50000.00000.02259 (4)
N10.15484 (3)0.5267 (2)0.51229 (9)0.0210 (2)
N20.20046 (5)0.7366 (4)0.52126 (17)0.0409 (5)
N30.17820 (3)0.0248 (2)0.32997 (10)0.0224 (2)
N40.12990 (4)−0.1493 (3)0.32282 (14)0.0315 (3)
N50.02529 (3)0.2267 (2)0.06994 (9)0.0186 (2)
N60.04353 (4)0.1195 (3)−0.05863 (9)0.0219 (2)
C10.12630 (4)0.5008 (3)0.53532 (12)0.0266 (3)
H1A0.11520.36760.51770.032*
C20.11291 (5)0.6585 (4)0.58280 (13)0.0342 (4)
H2A0.09330.63300.59780.041*
C30.12946 (5)0.8586 (4)0.60815 (14)0.0378 (5)
H3A0.12070.97150.63920.045*
C40.15844 (5)0.8889 (3)0.58741 (14)0.0337 (4)
H4A0.16971.02200.60450.040*
C50.17137 (4)0.7160 (3)0.53960 (12)0.0245 (3)
C60.20720 (4)0.0221 (3)0.30857 (14)0.0289 (3)
H6A0.22030.14630.32560.035*
C70.21823 (5)−0.1526 (4)0.26346 (16)0.0358 (4)
H7A0.2382−0.14660.24940.043*
C80.19870 (5)−0.3410 (4)0.23897 (14)0.0309 (4)
H8A0.2057−0.46380.20890.037*
C90.16925 (4)−0.3435 (3)0.25950 (12)0.0247 (3)
H9A0.1561−0.46830.24400.030*
C100.15902 (4)−0.1544 (3)0.30455 (11)0.0213 (3)
C110.02265 (4)0.1836 (3)0.15608 (11)0.0243 (3)
H11A0.01250.29080.18590.029*
C120.03415 (4)−0.0094 (3)0.20150 (11)0.0257 (3)
H12A0.0321−0.03210.26080.031*
C130.04910 (4)−0.1712 (3)0.15613 (12)0.0241 (3)
H13A0.0569−0.30540.18480.029*
C140.05227 (4)−0.1310 (3)0.06904 (11)0.0211 (3)
H14A0.0621−0.23790.03810.025*
C150.04047 (3)0.0740 (3)0.02689 (10)0.0168 (2)
N70.42167 (4)0.8502 (3)0.16126 (10)0.0247 (3)
O10.40629 (4)0.9276 (3)0.21680 (11)0.0424 (4)
O20.44689 (4)0.9364 (3)0.15093 (11)0.0398 (4)
O30.41119 (3)0.6776 (2)0.11617 (9)0.0267 (2)
N80.25139 (8)0.2036 (5)0.5180 (2)0.0269 (6)0.50
O40.22809 (7)0.2267 (5)0.52820 (18)0.0835 (9)
O50.26419 (7)0.0502 (5)0.5660 (2)0.0338 (6)0.50
H1N60.0430 (6)0.253 (5)−0.0764 (19)0.034 (7)*
H1N40.1229 (7)−0.034 (6)0.343 (2)0.045 (8)*
H2N60.0566 (6)0.034 (4)−0.0839 (17)0.028 (6)*
H2N40.1184 (7)−0.260 (5)0.310 (2)0.042 (8)*
H1N20.2107 (8)0.854 (6)0.536 (2)0.061 (10)*
H2N20.2088 (7)0.625 (4)0.499 (2)0.049 (9)*
U11U22U33U12U13U23
Ag10.05014 (9)0.01987 (6)0.02380 (6)0.00820 (6)0.00876 (6)−0.00160 (5)
Ag20.02482 (7)0.02088 (8)0.02184 (7)0.00686 (6)0.00365 (6)−0.00096 (6)
N10.0244 (6)0.0182 (6)0.0196 (5)0.0011 (5)0.0020 (5)−0.0018 (4)
N20.0327 (9)0.0262 (8)0.0647 (14)−0.0056 (7)0.0116 (9)0.0090 (9)
N30.0251 (6)0.0194 (6)0.0220 (6)0.0003 (5)0.0024 (5)−0.0025 (5)
N40.0265 (7)0.0261 (7)0.0442 (10)−0.0002 (6)0.0124 (7)0.0056 (7)
N50.0197 (5)0.0196 (6)0.0166 (5)0.0014 (5)0.0037 (4)−0.0017 (4)
N60.0282 (6)0.0204 (6)0.0183 (5)0.0042 (5)0.0081 (5)0.0010 (5)
C10.0225 (7)0.0304 (8)0.0248 (7)0.0002 (7)−0.0009 (6)−0.0001 (6)
C20.0263 (8)0.0494 (12)0.0262 (8)0.0118 (8)0.0030 (6)0.0016 (8)
C30.0428 (11)0.0406 (11)0.0260 (8)0.0212 (9)−0.0039 (8)−0.0110 (8)
C40.0417 (10)0.0204 (8)0.0329 (9)0.0063 (7)−0.0095 (8)−0.0080 (7)
C50.0275 (7)0.0171 (6)0.0268 (7)0.0005 (6)−0.0005 (6)0.0011 (6)
C60.0232 (7)0.0269 (8)0.0353 (9)−0.0029 (6)0.0019 (6)−0.0072 (7)
C70.0227 (8)0.0390 (11)0.0457 (11)0.0027 (8)0.0058 (7)−0.0105 (9)
C80.0331 (9)0.0270 (8)0.0310 (9)0.0073 (7)0.0016 (7)−0.0077 (7)
C90.0299 (8)0.0179 (6)0.0236 (7)0.0009 (6)−0.0025 (6)−0.0004 (6)
C100.0238 (7)0.0186 (6)0.0205 (6)0.0012 (6)0.0015 (5)0.0028 (5)
C110.0243 (7)0.0312 (8)0.0178 (6)0.0029 (6)0.0052 (5)−0.0023 (6)
C120.0255 (7)0.0350 (9)0.0161 (6)−0.0027 (7)0.0023 (5)0.0034 (6)
C130.0223 (7)0.0257 (8)0.0227 (7)−0.0014 (6)−0.0002 (5)0.0064 (6)
C140.0226 (6)0.0185 (6)0.0224 (7)0.0012 (5)0.0044 (5)0.0015 (5)
C150.0170 (5)0.0169 (6)0.0164 (5)−0.0009 (5)0.0024 (4)−0.0017 (5)
N70.0315 (7)0.0195 (6)0.0218 (6)0.0061 (5)0.0011 (5)0.0018 (5)
O10.0510 (9)0.0404 (8)0.0358 (8)0.0172 (8)0.0082 (7)−0.0138 (7)
O20.0404 (8)0.0332 (8)0.0431 (8)−0.0102 (7)0.0008 (6)0.0149 (7)
O30.0302 (6)0.0249 (6)0.0254 (6)0.0021 (5)0.0061 (5)−0.0067 (5)
N80.0210 (12)0.0245 (17)0.0309 (17)0.0005 (12)−0.0069 (12)−0.0071 (11)
O40.106 (2)0.0855 (18)0.0630 (15)−0.0602 (17)0.0273 (14)−0.0217 (13)
O50.0347 (14)0.0324 (14)0.0329 (14)0.0093 (12)0.0026 (11)0.0020 (12)
Ag1—N12.1406 (14)C4—H4A0.93
Ag1—N32.1413 (14)C6—C71.364 (3)
Ag2—N5i2.1115 (14)C6—H6A0.93
Ag2—N52.1115 (14)C7—C81.398 (3)
N1—C51.343 (2)C7—H7A0.93
N1—C11.354 (2)C8—C91.368 (3)
N2—C51.345 (3)C8—H8A0.93
N2—H1N20.83 (4)C9—C101.414 (2)
N2—H2N20.85 (4)C9—H9A0.93
N3—C101.350 (2)C11—C121.369 (3)
N3—C61.354 (2)C11—H11A0.93
N4—C101.341 (2)C12—C131.397 (3)
N4—H1N40.82 (3)C12—H12A0.93
N4—H2N40.82 (3)C13—C141.373 (2)
N5—C151.3473 (19)C13—H13A0.93
N5—C111.355 (2)C14—C151.411 (2)
N6—C151.354 (2)C14—H14A0.93
N6—H1N60.83 (3)N7—O21.239 (2)
N6—H2N60.89 (3)N7—O11.250 (2)
C1—C21.363 (3)N7—O31.257 (2)
C1—H1A0.93N8—N8ii0.764 (6)
C2—C31.390 (4)N8—O41.058 (4)
C2—H2A0.93N8—O51.223 (4)
C3—C41.361 (3)N8—O4ii1.294 (5)
C3—H3A0.93O4—N8ii1.294 (5)
C4—C51.418 (3)
N1—Ag1—N3175.97 (6)N3—C6—C7123.67 (17)
N5i—Ag2—N5180.00 (10)N3—C6—H6A118.2
C5—N1—C1118.27 (15)C7—C6—H6A118.2
C5—N1—Ag1124.21 (12)C6—C7—C8118.27 (18)
C1—N1—Ag1116.97 (12)C6—C7—H7A120.9
C5—N2—H1N2120 (2)C8—C7—H7A120.9
C5—N2—H2N2120 (2)C9—C8—C7119.52 (17)
H1N2—N2—H2N2120 (3)C9—C8—H8A120.2
C10—N3—C6118.18 (15)C7—C8—H8A120.2
C10—N3—Ag1122.67 (11)C8—C9—C10119.31 (17)
C6—N3—Ag1118.41 (12)C8—C9—H9A120.3
C10—N4—H1N4121 (2)C10—C9—H9A120.3
C10—N4—H2N4119 (2)N4—C10—N3118.52 (16)
H1N4—N4—H2N4119 (3)N4—C10—C9120.47 (17)
C15—N5—C11118.54 (14)N3—C10—C9121.01 (16)
C15—N5—Ag2120.92 (10)N5—C11—C12123.47 (16)
C11—N5—Ag2119.85 (11)N5—C11—H11A118.3
C15—N6—H1N6119.7 (19)C12—C11—H11A118.3
C15—N6—H2N6118.9 (16)C11—C12—C13118.07 (15)
H1N6—N6—H2N6112 (2)C11—C12—H12A121.0
N1—C1—C2123.88 (19)C13—C12—H12A121.0
N1—C1—H1A118.1C14—C13—C12119.62 (16)
C2—C1—H1A118.1C14—C13—H13A120.2
C1—C2—C3117.93 (19)C12—C13—H13A120.2
C1—C2—H2A121.0C13—C14—C15119.34 (15)
C3—C2—H2A121.0C13—C14—H14A120.3
C4—C3—C2119.80 (18)C15—C14—H14A120.3
C4—C3—H3A120.1N5—C15—N6118.38 (14)
C2—C3—H3A120.1N5—C15—C14120.90 (14)
C3—C4—C5119.50 (19)N6—C15—C14120.71 (14)
C3—C4—H4A120.2O2—N7—O1121.89 (18)
C5—C4—H4A120.2O2—N7—O3119.84 (16)
N1—C5—N2118.52 (18)O1—N7—O3118.26 (17)
N1—C5—C4120.53 (17)O4—N8—O5110.4 (4)
N2—C5—C4120.94 (19)
C5—N1—C1—C21.7 (3)C6—N3—C10—C92.1 (2)
Ag1—N1—C1—C2−170.08 (15)Ag1—N3—C10—C9−167.90 (12)
N1—C1—C2—C30.7 (3)C8—C9—C10—N4177.81 (18)
C1—C2—C3—C4−1.7 (3)C8—C9—C10—N3−2.1 (3)
C2—C3—C4—C50.4 (3)C15—N5—C11—C12−1.1 (3)
C1—N1—C5—N2176.31 (18)Ag2—N5—C11—C12169.43 (14)
Ag1—N1—C5—N2−12.5 (2)N5—C11—C12—C13−0.7 (3)
C1—N1—C5—C4−3.1 (3)C11—C12—C13—C141.1 (3)
Ag1—N1—C5—C4168.05 (13)C12—C13—C14—C150.3 (2)
C3—C4—C5—N12.1 (3)C11—N5—C15—N6−178.89 (15)
C3—C4—C5—N2−177.3 (2)Ag2—N5—C15—N610.64 (19)
C10—N3—C6—C7−0.6 (3)C11—N5—C15—C142.6 (2)
Ag1—N3—C6—C7169.84 (18)Ag2—N5—C15—C14−167.88 (11)
N3—C6—C7—C8−0.9 (3)C13—C14—C15—N5−2.2 (2)
C6—C7—C8—C90.9 (3)C13—C14—C15—N6179.32 (15)
C7—C8—C9—C100.5 (3)O5—N8—O4—N8ii−177.8 (7)
C6—N3—C10—N4−177.77 (17)O4ii—N8—O4—N8ii0.0
Ag1—N3—C10—N412.2 (2)
D—H···AD—HH···AD···AD—H···A
N6—H1N6···O2iii0.83 (3)2.22 (3)3.016 (2)160 (3)
N4—H1N4···O3iv0.82 (3)2.11 (3)2.879 (2)157 (3)
N6—H2N6···O3v0.89 (3)1.99 (3)2.873 (2)169 (2)
N4—H2N4···O1vi0.82 (3)2.12 (3)2.934 (3)173 (3)
N2—H1N2···O4vii0.83 (4)2.32 (4)3.102 (3)159 (3)
N2—H1N2···O5vii0.83 (4)2.55 (4)3.282 (4)148 (3)
N2—H2N2···O5ii0.84 (1)1.95 (1)2.767 (4)161 (3)
N2—H2N2···O40.85 (4)2.49 (2)3.210 (4)144 (3)
C1—H1A···O3iv0.932.413.183 (2)140
C6—H6A···O5ii0.932.433.250 (4)147
C13—H13A···O1vi0.932.523.406 (2)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N6—H1N6⋯O2i0.83 (3)2.22 (3)3.016 (2)160 (3)
N4—H1N4⋯O3ii0.82 (3)2.11 (3)2.879 (2)157 (3)
N6—H2N6⋯O3iii0.89 (3)1.99 (3)2.873 (2)169 (2)
N4—H2N4⋯O1iv0.82 (3)2.12 (3)2.934 (3)173 (3)
N2—H1N2⋯O4v0.83 (4)2.32 (4)3.102 (3)159 (3)
N2—H1N2⋯O5v0.83 (4)2.55 (4)3.282 (4)148 (3)
N2—H2N2⋯O5vi0.84 (1)1.95 (1)2.767 (4)161 (3)
N2—H2N2⋯O40.85 (4)2.49 (2)3.210 (4)144 (3)
C1—H1A⋯O3ii0.932.413.183 (2)140
C6—H6A⋯O5vi0.932.433.250 (4)147
C13—H13A⋯O1iv0.932.523.406 (2)159

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Bis(4-aminopyridine)silver(I) nitrate and tris(2,6-diaminopyridine)silver(I) nitrate

Authors: 
Journal:  Acta Crystallogr C       Date:  2000-02       Impact factor: 1.172

  2 in total

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