Literature DB >> 21580819

catena-Poly[[[bis-[aqua-nickel(II)]bis-(μ-pyridine-2,6-dicarboxyl-ato N-oxide)]-μ-1,2-di-4-pyridylethane] tetra-hydrate].

Ming-Hua Yang1.   

Abstract

In the title compound, {[Ni(2)(C(7)H(3)NO(5))(2)(C(12)H(12)N(2))(H(2)O)(2)]·4H(2)O}(n), two n class="Chemical">Ni(II) ions, two tridentate pyridine-2,6-dicarboxyl-ate N-oxide ligands and two coordinated water mol-ecules form centrosymmetric dinuclear units, which are further bridged by centrosymmetric 1,2-di-4-pyridylethane ligands into polymeric chains along [210]. Each Ni(II) ion has a distorted square-pyramidal environment, with the basal plane formed by three O [Ni-O = 1.9290 (16)-1.9588 (10) Å] and one N [Ni-N = 1.9828 (18) Å] atoms and the apical position occupied by the water mol-ecule [Ni-O = 2.2643 (11) Å]. The water mol-ecules are involved in the formation of O-H⋯O hydrogen bonds.

Entities:  

Year:  2008        PMID: 21580819      PMCID: PMC2959744          DOI: 10.1107/S1600536808031619

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Laine et al. (1995a ▶,b ▶); Lin et al. (2006 ▶); Nathan et al. (1985 ▶). For a related structure, see: Wen et al. (2005 ▶).

Experimental

Crystal data

[Ni2(C7H3NO5)2(C12H12N2)(H2O)2]·4H2O M = 771.96 Triclinic, a = 8.2803 (16) Å b = 10.3542 (15) Å c = 11.1326 (16) Å α = 113.727 (2)° β = 104.282 (2)° γ = 100.255 (2)° V = 804.4 (2) Å3 Z = 1 Mo Kα radiation μ = 1.25 mm−1 T = 298 (2) K 0.25 × 0.19 × 0.16 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.745, T max = 0.825 4146 measured reflections 2850 independent reflections 2180 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.063 S = 0.83 2850 reflections 199 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.29 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2; data reduction: APEX2; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2003 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808031619/cv2458sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808031619/cv2458Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni2(C7H3NO5)2(C12H12N2)(H2O)2]·4H2OZ = 1
Mr = 771.96F(000) = 398
Triclinic, P1Dx = 1.594 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.2803 (16) ÅCell parameters from 2850 reflections
b = 10.3542 (15) Åθ = 2.1–25.2°
c = 11.1326 (16) ŵ = 1.25 mm1
α = 113.727 (2)°T = 298 K
β = 104.282 (2)°Block, green
γ = 100.255 (2)°0.25 × 0.19 × 0.16 mm
V = 804.4 (2) Å3
Bruker APEXII area-detector diffractometer2850 independent reflections
Radiation source: fine-focus sealed tube2180 reflections with I > 2σ(I)
graphiteRint = 0.033
φ and ω scansθmax = 25.2°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→9
Tmin = 0.745, Tmax = 0.825k = −12→12
4146 measured reflectionsl = −13→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.063H-atom parameters constrained
S = 0.83w = 1/[σ2(Fo2) + (0.0269P)2 + 0.19P] where P = (Fo2 + 2Fc2)/3
2850 reflections(Δ/σ)max < 0.001
199 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.19610 (4)0.10188 (3)0.85792 (3)0.03124 (11)
O10.0912 (2)0.1451 (2)0.70832 (19)0.0473 (5)
O2−0.1257 (2)0.1548 (2)0.5550 (2)0.0600 (6)
O3−0.03449 (19)0.0177 (2)0.85274 (17)0.0433 (4)
N10.4335 (2)0.2138 (2)0.8837 (2)0.0376 (5)
N2−0.1753 (2)−0.0555 (2)0.7358 (2)0.0354 (5)
C1−0.0673 (3)0.1028 (3)0.6318 (3)0.0401 (6)
C2−0.2011 (3)−0.0227 (3)0.6272 (3)0.0368 (6)
C3−0.3544 (3)−0.1043 (3)0.5128 (3)0.0489 (7)
H3−0.3736−0.08470.43690.059*
C4−0.4795 (4)−0.2144 (3)0.5092 (3)0.0570 (8)
H4−0.5824−0.26860.43150.068*
C5−0.4508 (3)−0.2433 (3)0.6215 (3)0.0492 (7)
H5−0.5343−0.31720.62050.059*
C6−0.2980 (3)−0.1624 (3)0.7350 (3)0.0366 (6)
C80.5711 (3)0.1727 (3)0.9306 (3)0.0490 (7)
H80.55140.09530.95290.059*
C90.7394 (3)0.2397 (3)0.9470 (3)0.0507 (7)
H90.83070.20770.97980.061*
C100.7726 (3)0.3553 (3)0.9144 (3)0.0436 (6)
C110.9551 (3)0.4316 (3)0.9304 (3)0.0518 (7)
H11A1.02340.36350.92150.062*
H11B0.94880.45870.85590.062*
C120.6307 (3)0.3995 (3)0.8690 (3)0.0479 (7)
H120.64740.47820.84820.058*
C130.46548 (10)0.32671 (9)0.85477 (8)0.0442 (7)
H130.37220.35770.82360.053*
O1W0.22201 (10)−0.11885 (9)0.72089 (8)0.0584 (5)
H1W0.1610−0.19390.72120.088*
H2W0.2045−0.13670.63570.088*
O2W0.15515 (10)0.41900 (9)0.61420 (8)0.0944 (8)
H3W0.08280.33640.58870.142*
H4W0.11220.4890.63540.142*
O3W0.03080 (10)0.37588 (9)0.33371 (8)0.0875 (7)
H6W0.08200.35920.27410.131*
H5W0.11160.45100.40440.131*
C7−0.25478 (10)−0.18425 (9)0.86469 (8)0.0374 (6)
O4−0.28538 (10)−0.09359 (9)0.96606 (8)0.0401 (4)
O5−0.19822 (10)−0.28825 (9)0.85957 (8)0.0540 (5)
U11U22U33U12U13U23
Ni10.02697 (17)0.0386 (2)0.03728 (19)0.00914 (13)0.01384 (14)0.02526 (16)
O10.0408 (10)0.0605 (12)0.0545 (12)0.0133 (9)0.0172 (9)0.0406 (11)
O20.0654 (13)0.0709 (14)0.0579 (13)0.0196 (11)0.0122 (10)0.0495 (12)
O30.0302 (9)0.0632 (12)0.0351 (10)0.0041 (8)0.0070 (8)0.0286 (9)
N10.0335 (11)0.0434 (13)0.0472 (13)0.0122 (10)0.0175 (10)0.0297 (11)
N20.0296 (11)0.0454 (13)0.0341 (12)0.0114 (10)0.0107 (10)0.0218 (11)
C10.0484 (16)0.0430 (16)0.0361 (15)0.0176 (13)0.0183 (13)0.0219 (13)
C20.0388 (14)0.0456 (16)0.0335 (14)0.0180 (12)0.0152 (12)0.0221 (13)
C30.0471 (16)0.0630 (19)0.0386 (16)0.0170 (15)0.0102 (14)0.0285 (15)
C40.0403 (16)0.073 (2)0.0413 (17)0.0064 (15)0.0009 (14)0.0243 (16)
C50.0403 (15)0.0570 (19)0.0440 (17)0.0067 (13)0.0102 (13)0.0241 (15)
C60.0319 (13)0.0431 (16)0.0374 (15)0.0096 (12)0.0129 (12)0.0219 (13)
C80.0419 (15)0.0528 (18)0.070 (2)0.0182 (13)0.0246 (15)0.0413 (16)
C90.0376 (15)0.0531 (18)0.070 (2)0.0172 (13)0.0220 (14)0.0340 (16)
C100.0384 (14)0.0430 (16)0.0456 (16)0.0072 (12)0.0191 (13)0.0172 (14)
C110.0420 (16)0.0497 (18)0.0549 (18)0.0048 (13)0.0224 (14)0.0172 (14)
C120.0497 (16)0.0403 (16)0.0560 (18)0.0061 (13)0.0202 (14)0.0270 (15)
C130.0400 (15)0.0445 (16)0.0553 (17)0.0127 (13)0.0167 (13)0.0305 (15)
O1W0.0732 (13)0.0580 (13)0.0531 (12)0.0221 (11)0.0286 (11)0.0301 (11)
O2W0.1038 (19)0.0682 (16)0.113 (2)0.0268 (14)0.0349 (16)0.0454 (15)
O3W0.127 (2)0.0742 (16)0.0925 (17)0.0440 (15)0.0679 (16)0.0463 (14)
C70.0256 (13)0.0449 (17)0.0418 (16)0.0028 (12)0.0102 (12)0.0249 (14)
O40.0350 (9)0.0520 (11)0.0420 (10)0.0147 (8)0.0165 (8)0.0278 (9)
O50.0675 (13)0.0502 (12)0.0608 (13)0.0252 (10)0.0269 (11)0.0360 (11)
Ni1—O31.9290 (16)C8—C91.373 (3)
Ni1—O11.9373 (16)C8—H80.9300
Ni1—O4i1.9588 (10)C9—C101.386 (3)
Ni1—N11.9828 (18)C9—H90.9300
Ni1—O1W2.2643 (11)C10—C121.390 (3)
O1—C11.258 (3)C10—C111.506 (3)
O2—C11.230 (3)C11—C11ii1.501 (5)
O3—N21.331 (2)C11—H11A0.9700
N1—C131.3332 (19)C11—H11B0.9700
N1—C81.345 (3)C12—C131.376 (3)
N2—C61.358 (3)C12—H120.9300
N2—C21.361 (3)C13—H130.9300
C1—C21.525 (3)O1W—H1W0.85
C2—C31.379 (3)O1W—H2W0.86
C3—C41.377 (4)O2W—H3W0.84
C3—H30.9300O2W—H4W0.84
C4—C51.375 (3)O3W—H6W0.85
C4—H40.9300O3W—H5W0.86
C5—C61.371 (3)C7—O51.2351 (14)
C5—H50.9300C7—O41.2618 (12)
C6—C71.517 (3)O4—Ni1i1.9588 (10)
O3—Ni1—O189.83 (7)N2—C6—C5120.3 (2)
O3—Ni1—O4i86.14 (5)N2—C6—C7116.2 (2)
O1—Ni1—O4i167.38 (6)C5—C6—C7123.6 (3)
O3—Ni1—N1172.23 (8)N1—C8—C9123.1 (2)
O1—Ni1—N190.76 (7)N1—C8—H8118.5
O4i—Ni1—N191.65 (6)C9—C8—H8118.5
O3—Ni1—O1W94.95 (6)C8—C9—C10119.7 (2)
O1—Ni1—O1W97.00 (6)C8—C9—H9120.2
O4i—Ni1—O1W95.30 (6)C10—C9—H9120.2
N1—Ni1—O1W92.67 (6)C9—C10—C12117.0 (2)
C1—O1—Ni1129.11 (16)C9—C10—C11121.5 (2)
N2—O3—Ni1123.58 (13)C12—C10—C11121.5 (2)
C13—N1—C8117.39 (17)C11ii—C11—C10111.5 (3)
C13—N1—Ni1123.82 (12)C11ii—C11—H11A109.3
C8—N1—Ni1118.78 (15)C10—C11—H11A109.3
O3—N2—C6114.80 (18)C11ii—C11—H11B109.3
O3—N2—C2123.49 (19)C10—C11—H11B109.3
C6—N2—C2121.6 (2)H11A—C11—H11B108.0
O2—C1—O1124.3 (2)C13—C12—C10120.0 (2)
O2—C1—C2115.3 (2)C13—C12—H12120.0
O1—C1—C2120.5 (2)C10—C12—H12120.0
N2—C2—C3118.2 (2)N1—C13—C12122.78 (15)
N2—C2—C1121.5 (2)N1—C13—H13118.6
C3—C2—C1120.3 (2)C12—C13—H13118.6
C4—C3—C2121.1 (2)Ni1—O1W—H1W115.3
C4—C3—H3119.5Ni1—O1W—H2W114.2
C2—C3—H3119.5H1W—O1W—H2W108.3
C5—C4—C3119.4 (3)H3W—O2W—H4W113.1
C5—C4—H4120.3H6W—O3W—H5W99.6
C3—C4—H4120.3O5—C7—O4127.3 (1)
C6—C5—C4119.5 (2)O5—C7—C6117.9 (2)
C6—C5—H5120.3O4—C7—C6114.9 (2)
C4—C5—H5120.3C7—O4—Ni1i114.7 (1)
D—H···AD—HH···AD···AD—H···A
O1W—H1W···O3Wiii0.851.992.8144 (15)162
O1W—H2W···O2iii0.861.982.824 (2)168
O3W—H6W···O5iii0.851.942.7791 (13)170
O3W—H5W···O2W0.862.442.8527 (13)110
O2W—H3W···O20.842.152.976 (2)167
O2W—H4W···O3Wiv0.841.972.7985 (14)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1W⋯O3Wi0.851.992.8144 (15)162
O1W—H2W⋯O2i0.861.982.824 (2)168
O3W—H6W⋯O5i0.851.942.7791 (13)170
O3W—H5W⋯O2W0.862.442.8527 (13)110
O2W—H3W⋯O20.842.152.976 (2)167
O2W—H4W⋯O3Wii0.841.972.7985 (14)169

Symmetry codes: (i) ; (ii) .

  2 in total

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