| Literature DB >> 21580769 |
Zhen-Zhen Yang1, Feng Xu, Hong-Yun Chen.
Abstract
In the title compound, C(13)H(16)N(4)O(2), the central tetra-zine ring adopts an unsymmetrical boat conformation with the two C atoms as flagpoles. This compound can be considered as having homoaromaticity.Entities:
Year: 2010 PMID: 21580769 PMCID: PMC2983945 DOI: 10.1107/S1600536810011165
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H16N4O2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1846 reflections | |
| θ = 3.4–27.5° | |
| µ = 0.09 mm−1 | |
| α = 113.232 (6)° | |
| β = 99.820 (15)° | Prism, red |
| γ = 93.268 (11)° | 0.50 × 0.37 × 0.23 mm |
| Rigaku AFC10/Saturn724+ diffractometer | 2207 reflections with |
| Radiation source: Rotating Anode | |
| graphite | θmax = 27.5°, θmin = 3.4° |
| Detector resolution: 28.5714 pixels mm-1 | |
| φ and ω scans | |
| 6410 measured reflections | |
| 2920 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2920 reflections | (Δ/σ)max = 0.001 |
| 175 parameters | Δρmax = 0.32 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 1.03435 (11) | 0.17376 (12) | 0.48191 (9) | 0.0240 (2) | |
| O2 | 0.16763 (10) | 0.73207 (11) | 0.11227 (10) | 0.0240 (2) | |
| N1 | 0.33360 (12) | 0.55086 (13) | 0.15664 (11) | 0.0189 (2) | |
| N2 | 0.47200 (12) | 0.53199 (13) | 0.23910 (11) | 0.0186 (2) | |
| N3 | 0.47565 (13) | 0.27926 (13) | 0.02813 (11) | 0.0209 (2) | |
| N4 | 0.34190 (13) | 0.29167 (14) | −0.04264 (11) | 0.0224 (2) | |
| C1 | 0.69924 (15) | 0.41266 (16) | 0.41273 (13) | 0.0193 (3) | |
| H1 | 0.6425 | 0.5041 | 0.4631 | 0.023* | |
| C2 | 0.82340 (15) | 0.36341 (16) | 0.49081 (13) | 0.0198 (3) | |
| H2 | 0.8512 | 0.4207 | 0.5938 | 0.024* | |
| C3 | 0.90723 (14) | 0.22979 (16) | 0.41785 (13) | 0.0179 (3) | |
| C4 | 0.86288 (15) | 0.14452 (16) | 0.26693 (13) | 0.0213 (3) | |
| H4 | 0.9183 | 0.0516 | 0.2169 | 0.026* | |
| C5 | 0.73919 (15) | 0.19411 (16) | 0.18974 (13) | 0.0198 (3) | |
| H5 | 0.7102 | 0.1351 | 0.0869 | 0.024* | |
| C6 | 0.65589 (14) | 0.33049 (15) | 0.26145 (13) | 0.0166 (3) | |
| C7 | 0.52322 (15) | 0.38258 (16) | 0.18025 (13) | 0.0174 (3) | |
| C8 | 0.23071 (15) | 0.39564 (16) | 0.04682 (13) | 0.0197 (3) | |
| H8 | 0.1475 | 0.4295 | −0.0163 | 0.024* | |
| C9 | 0.14232 (16) | 0.29206 (17) | 0.11103 (14) | 0.0229 (3) | |
| H9A | 0.2213 | 0.2738 | 0.1846 | 0.027* | |
| H9B | 0.0908 | 0.1798 | 0.0339 | 0.027* | |
| H9C | 0.0577 | 0.3556 | 0.1561 | 0.027* | |
| C10 | 0.29499 (15) | 0.71638 (16) | 0.18095 (13) | 0.0188 (3) | |
| C11 | 0.41530 (15) | 0.86447 (16) | 0.29536 (13) | 0.0211 (3) | |
| H11A | 0.5256 | 0.8546 | 0.2720 | 0.025* | |
| H11B | 0.4215 | 0.8583 | 0.3906 | 0.025* | |
| C12 | 0.36603 (17) | 1.03756 (17) | 0.30564 (15) | 0.0267 (3) | |
| H12A | 0.3573 | 1.0429 | 0.2109 | 0.032* | |
| H12B | 0.4492 | 1.1311 | 0.3782 | 0.032* | |
| H12C | 0.2598 | 1.0506 | 0.3345 | 0.032* | |
| C13 | 1.07827 (16) | 0.24669 (18) | 0.63702 (14) | 0.0246 (3) | |
| H13A | 1.1083 | 0.3722 | 0.6737 | 0.030* | |
| H13B | 1.1719 | 0.1957 | 0.6680 | 0.030* | |
| H13C | 0.9848 | 0.2222 | 0.6757 | 0.030* |
| O1 | 0.0227 (5) | 0.0325 (5) | 0.0196 (5) | 0.0115 (4) | 0.0026 (4) | 0.0134 (4) |
| O2 | 0.0192 (5) | 0.0280 (5) | 0.0261 (5) | 0.0064 (4) | 0.0008 (4) | 0.0134 (4) |
| N1 | 0.0169 (5) | 0.0206 (5) | 0.0185 (5) | 0.0019 (4) | −0.0015 (4) | 0.0094 (4) |
| N2 | 0.0166 (5) | 0.0217 (5) | 0.0192 (5) | 0.0028 (4) | 0.0004 (4) | 0.0114 (4) |
| N3 | 0.0206 (6) | 0.0244 (6) | 0.0174 (5) | 0.0031 (4) | 0.0013 (4) | 0.0094 (5) |
| N4 | 0.0210 (6) | 0.0256 (6) | 0.0195 (5) | 0.0030 (5) | 0.0004 (5) | 0.0096 (5) |
| C1 | 0.0184 (6) | 0.0202 (6) | 0.0187 (6) | 0.0047 (5) | 0.0037 (5) | 0.0073 (5) |
| C2 | 0.0205 (6) | 0.0224 (6) | 0.0151 (6) | 0.0019 (5) | 0.0014 (5) | 0.0073 (5) |
| C3 | 0.0147 (6) | 0.0219 (6) | 0.0200 (6) | 0.0027 (5) | 0.0020 (5) | 0.0123 (5) |
| C4 | 0.0239 (7) | 0.0220 (6) | 0.0199 (6) | 0.0088 (5) | 0.0065 (5) | 0.0091 (5) |
| C5 | 0.0227 (7) | 0.0210 (6) | 0.0144 (6) | 0.0033 (5) | 0.0022 (5) | 0.0066 (5) |
| C6 | 0.0147 (6) | 0.0182 (6) | 0.0181 (6) | 0.0001 (5) | 0.0017 (5) | 0.0096 (5) |
| C7 | 0.0157 (6) | 0.0207 (6) | 0.0169 (6) | 0.0007 (5) | 0.0026 (5) | 0.0094 (5) |
| C8 | 0.0173 (6) | 0.0218 (6) | 0.0180 (6) | 0.0017 (5) | −0.0015 (5) | 0.0083 (5) |
| C9 | 0.0200 (6) | 0.0238 (7) | 0.0237 (7) | 0.0003 (5) | 0.0008 (5) | 0.0103 (5) |
| C10 | 0.0188 (6) | 0.0232 (6) | 0.0184 (6) | 0.0053 (5) | 0.0057 (5) | 0.0118 (5) |
| C11 | 0.0212 (7) | 0.0218 (7) | 0.0209 (7) | 0.0048 (5) | 0.0024 (5) | 0.0101 (5) |
| C12 | 0.0261 (7) | 0.0213 (7) | 0.0332 (8) | 0.0049 (5) | 0.0047 (6) | 0.0120 (6) |
| C13 | 0.0222 (7) | 0.0329 (7) | 0.0200 (7) | 0.0043 (6) | −0.0006 (5) | 0.0141 (6) |
| O1—C3 | 1.3596 (14) | C5—C6 | 1.3995 (17) |
| O1—C13 | 1.4291 (15) | C5—H5 | 0.95 |
| O2—C10 | 1.2155 (14) | C6—C7 | 1.4647 (16) |
| N1—N2 | 1.3669 (14) | C8—C9 | 1.5160 (17) |
| N1—C10 | 1.3941 (16) | C8—H8 | 1.00 |
| N1—C8 | 1.4531 (15) | C9—H9A | 0.98 |
| N2—C7 | 1.3044 (16) | C9—H9B | 0.98 |
| N3—N4 | 1.2571 (14) | C9—H9C | 0.98 |
| N3—C7 | 1.4236 (16) | C10—C11 | 1.5015 (17) |
| N4—C8 | 1.4917 (16) | C11—C12 | 1.5169 (17) |
| C1—C2 | 1.3852 (17) | C11—H11A | 0.99 |
| C1—C6 | 1.3952 (17) | C11—H11B | 0.99 |
| C1—H1 | 0.95 | C12—H12A | 0.98 |
| C2—C3 | 1.3911 (17) | C12—H12B | 0.98 |
| C2—H2 | 0.95 | C12—H12C | 0.98 |
| C3—C4 | 1.3939 (17) | C13—H13A | 0.98 |
| C4—C5 | 1.3791 (17) | C13—H13B | 0.98 |
| C4—H4 | 0.95 | C13—H13C | 0.98 |
| C3—O1—C13 | 118.23 (10) | N1—C8—H8 | 108.9 |
| N2—N1—C10 | 119.47 (10) | N4—C8—H8 | 108.9 |
| N2—N1—C8 | 118.20 (10) | C9—C8—H8 | 108.9 |
| C10—N1—C8 | 122.32 (10) | C8—C9—H9A | 109.5 |
| C7—N2—N1 | 113.70 (10) | C8—C9—H9B | 109.5 |
| N4—N3—C7 | 120.02 (11) | H9A—C9—H9B | 109.5 |
| N3—N4—C8 | 115.25 (10) | C8—C9—H9C | 109.5 |
| C2—C1—C6 | 121.25 (12) | H9A—C9—H9C | 109.5 |
| C2—C1—H1 | 119.4 | H9B—C9—H9C | 109.5 |
| C6—C1—H1 | 119.4 | O2—C10—N1 | 119.15 (11) |
| C1—C2—C3 | 119.76 (11) | O2—C10—C11 | 124.57 (12) |
| C1—C2—H2 | 120.1 | N1—C10—C11 | 116.27 (10) |
| C3—C2—H2 | 120.1 | C10—C11—C12 | 111.53 (11) |
| O1—C3—C2 | 125.16 (11) | C10—C11—H11A | 109.3 |
| O1—C3—C4 | 115.33 (11) | C12—C11—H11A | 109.3 |
| C2—C3—C4 | 119.50 (11) | C10—C11—H11B | 109.3 |
| C5—C4—C3 | 120.48 (12) | C12—C11—H11B | 109.3 |
| C5—C4—H4 | 119.8 | H11A—C11—H11B | 108.0 |
| C3—C4—H4 | 119.8 | C11—C12—H12A | 109.5 |
| C4—C5—C6 | 120.64 (11) | C11—C12—H12B | 109.5 |
| C4—C5—H5 | 119.7 | H12A—C12—H12B | 109.5 |
| C6—C5—H5 | 119.7 | C11—C12—H12C | 109.5 |
| C1—C6—C5 | 118.35 (11) | H12A—C12—H12C | 109.5 |
| C1—C6—C7 | 120.72 (11) | H12B—C12—H12C | 109.5 |
| C5—C6—C7 | 120.91 (11) | O1—C13—H13A | 109.5 |
| N2—C7—N3 | 121.12 (11) | O1—C13—H13B | 109.5 |
| N2—C7—C6 | 121.13 (11) | H13A—C13—H13B | 109.5 |
| N3—C7—C6 | 116.68 (11) | O1—C13—H13C | 109.5 |
| N1—C8—N4 | 106.07 (9) | H13A—C13—H13C | 109.5 |
| N1—C8—C9 | 112.98 (10) | H13B—C13—H13C | 109.5 |
| N4—C8—C9 | 110.99 (10) | ||
| C10—N1—N2—C7 | −159.83 (10) | N4—N3—C7—C6 | 164.47 (10) |
| C8—N1—N2—C7 | 20.73 (14) | C1—C6—C7—N2 | 18.43 (17) |
| C7—N3—N4—C8 | −9.80 (16) | C5—C6—C7—N2 | −163.36 (11) |
| C6—C1—C2—C3 | 0.09 (18) | C1—C6—C7—N3 | −173.30 (11) |
| C13—O1—C3—C2 | 5.43 (17) | C5—C6—C7—N3 | 4.91 (16) |
| C13—O1—C3—C4 | −175.44 (11) | N2—N1—C8—N4 | −52.33 (13) |
| C1—C2—C3—O1 | 177.78 (11) | C10—N1—C8—N4 | 128.25 (11) |
| C1—C2—C3—C4 | −1.32 (18) | N2—N1—C8—C9 | 69.47 (13) |
| O1—C3—C4—C5 | −177.85 (11) | C10—N1—C8—C9 | −109.95 (13) |
| C2—C3—C4—C5 | 1.33 (18) | N3—N4—C8—N1 | 45.04 (13) |
| C3—C4—C5—C6 | −0.12 (18) | N3—N4—C8—C9 | −78.02 (13) |
| C2—C1—C6—C5 | 1.10 (17) | N2—N1—C10—O2 | −176.38 (11) |
| C2—C1—C6—C7 | 179.36 (11) | C8—N1—C10—O2 | 3.04 (17) |
| C4—C5—C6—C1 | −1.09 (17) | N2—N1—C10—C11 | 2.16 (16) |
| C4—C5—C6—C7 | −179.34 (11) | C8—N1—C10—C11 | −178.43 (10) |
| N1—N2—C7—N3 | 20.73 (16) | O2—C10—C11—C12 | −5.10 (17) |
| N1—N2—C7—C6 | −171.53 (10) | N1—C10—C11—C12 | 176.46 (11) |
| N4—N3—C7—N2 | −27.26 (17) |