Literature DB >> 21580761

N-(4-Chloro-phen-yl)ethanimidamide.

Nubia Boechat, Warner B Kover, Sabrina B Ferreira, Solange M S V Wardell, James L Wardell, Edward R T Tiekink.   

Abstract

A twisted conformation is found in the title compound, C(8)H(9)ClN(2), with the ethanimidamide residue being twisted substantially to the benzene ring [dihedral angle = 66.54 (14)°]. The conformation about the C=N double bond [1.299 (3) Å] is Z. A two-dimensional array with a zigzag topology is formed in the crystal structure via N-H⋯N and N-H⋯Cl hydrogen-bonding inter-actions.

Entities:  

Year:  2010        PMID: 21580761      PMCID: PMC2984039          DOI: 10.1107/S1600536810011013

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the synthesis of N-(p-chloro­phen­yl)acetamidine and related N-aryl­acetamidines used as reagents in the formation of anti-leishmanial compounds, see: Shearer et al. (1997 ▶); Rousselet et al. (1993 ▶); Patai (1975 ▶). For background to leismaniasis, see: Ouellette et al. (2004 ▶); Croft et al. (2006 ▶); Ferreira et al. (2007 ▶); World Health Organization (2010 ▶).

Experimental

Crystal data

C8H9ClN2 M = 168.62 Orthorhombic, a = 9.6460 (9) Å b = 9.0192 (4) Å c = 19.3281 (5) Å V = 1681.53 (18) Å3 Z = 8 Mo Kα radiation μ = 0.39 mm−1 T = 120 K 0.35 × 0.20 × 0.10 mm

Data collection

Nonius KappaCCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2007 ▶) T min = 0.792, T max = 1.000 14006 measured reflections 1924 independent reflections 1185 reflections with I > 2σ(I) R int = 0.081

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.150 S = 1.05 1924 reflections 107 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.34 e Å−3 Δρmin = −0.33 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: DENZO (Otwinowski & Minor, 1997 ▶) and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810011013/hg2664sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810011013/hg2664Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H9ClN2F(000) = 704
Mr = 168.62Dx = 1.332 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 2182 reflections
a = 9.6460 (9) Åθ = 2.9–27.5°
b = 9.0192 (4) ŵ = 0.39 mm1
c = 19.3281 (5) ÅT = 120 K
V = 1681.53 (18) Å3Block, colourless
Z = 80.35 × 0.20 × 0.10 mm
Nonius KappaCCD area-detector diffractometer1924 independent reflections
Radiation source: Enraf Nonius FR591 rotating anode1185 reflections with I > 2σ(I)
10 cm confocal mirrorsRint = 0.081
Detector resolution: 9.091 pixels mm-1θmax = 27.5°, θmin = 3.0°
φ and ω scansh = −11→12
Absorption correction: multi-scan (SADABS; Sheldrick, 2007)k = −11→9
Tmin = 0.792, Tmax = 1.000l = −25→21
14006 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.150H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.081P)2] where P = (Fo2 + 2Fc2)/3
1924 reflections(Δ/σ)max = 0.001
107 parametersΔρmax = 0.34 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.43525 (8)0.20450 (7)0.43084 (3)0.0430 (3)
N10.36389 (19)0.4659 (2)0.71058 (10)0.0308 (5)
N20.1234 (2)0.4244 (2)0.70948 (11)0.0305 (5)
H1N0.044 (3)0.438 (3)0.7313 (13)0.037*
H2N0.124 (3)0.379 (3)0.6740 (14)0.037*
C10.3774 (2)0.4032 (3)0.64327 (12)0.0274 (6)
C20.4543 (2)0.2746 (3)0.63454 (14)0.0316 (6)
H20.49380.22720.67380.038*
C30.4741 (3)0.2144 (3)0.56933 (13)0.0317 (6)
H30.52660.12600.56380.038*
C40.4169 (2)0.2837 (3)0.51261 (13)0.0286 (6)
C50.3428 (3)0.4144 (3)0.51965 (12)0.0342 (6)
H50.30540.46270.48020.041*
C60.3243 (3)0.4736 (3)0.58491 (13)0.0348 (6)
H60.27450.56380.59010.042*
C70.2408 (2)0.4770 (3)0.73731 (13)0.0269 (6)
C80.2239 (3)0.5538 (3)0.80540 (14)0.0367 (6)
H8A0.31530.57060.82610.055*
H8B0.16800.49190.83640.055*
H8C0.17740.64920.79830.055*
U11U22U33U12U13U23
Cl10.0537 (5)0.0446 (5)0.0307 (4)0.0051 (3)0.0060 (3)−0.0034 (3)
N10.0210 (11)0.0449 (13)0.0264 (12)−0.0010 (9)−0.0007 (9)−0.0032 (9)
N20.0205 (11)0.0461 (14)0.0248 (12)−0.0033 (9)0.0019 (9)−0.0061 (10)
C10.0171 (11)0.0372 (14)0.0280 (14)−0.0036 (10)−0.0002 (10)0.0003 (11)
C20.0286 (13)0.0340 (14)0.0321 (15)−0.0010 (11)−0.0040 (11)0.0052 (11)
C30.0297 (13)0.0288 (13)0.0367 (16)0.0031 (10)0.0014 (11)0.0001 (11)
C40.0284 (13)0.0306 (15)0.0266 (14)−0.0016 (10)0.0072 (10)0.0012 (10)
C50.0327 (14)0.0437 (16)0.0263 (14)0.0074 (11)0.0018 (11)0.0068 (11)
C60.0296 (14)0.0403 (15)0.0345 (15)0.0119 (11)0.0047 (12)0.0019 (11)
C70.0233 (12)0.0329 (13)0.0246 (14)−0.0026 (10)−0.0006 (10)0.0029 (10)
C80.0281 (13)0.0512 (16)0.0307 (14)−0.0059 (12)0.0014 (11)−0.0066 (12)
Cl1—C41.743 (3)C3—C41.377 (4)
N1—C71.299 (3)C3—H30.9500
N1—C11.425 (3)C4—C51.385 (3)
N2—C71.340 (3)C5—C61.381 (3)
N2—H1N0.89 (3)C5—H50.9500
N2—H2N0.80 (3)C6—H60.9500
C1—C21.387 (3)C7—C81.496 (4)
C1—C61.393 (3)C8—H8A0.9800
C2—C31.386 (4)C8—H8B0.9800
C2—H20.9500C8—H8C0.9800
C7—N1—C1118.52 (19)C6—C5—C4119.1 (2)
C7—N2—H1N119.4 (17)C6—C5—H5120.5
C7—N2—H2N121 (2)C4—C5—H5120.5
H1N—N2—H2N119 (3)C5—C6—C1121.0 (2)
C2—C1—C6118.7 (2)C5—C6—H6119.5
C2—C1—N1119.5 (2)C1—C6—H6119.5
C6—C1—N1121.6 (2)N1—C7—N2125.8 (2)
C3—C2—C1120.8 (2)N1—C7—C8119.0 (2)
C3—C2—H2119.6N2—C7—C8115.2 (2)
C1—C2—H2119.6C7—C8—H8A109.5
C4—C3—C2119.4 (2)C7—C8—H8B109.5
C4—C3—H3120.3H8A—C8—H8B109.5
C2—C3—H3120.3C7—C8—H8C109.5
C3—C4—C5121.0 (2)H8A—C8—H8C109.5
C3—C4—Cl1119.65 (19)H8B—C8—H8C109.5
C5—C4—Cl1119.4 (2)
D—H···AD—HH···AD···AD—H···A
N2—H1n···N1i0.88 (3)2.08 (3)2.965 (3)176 (3)
N2—H2n···Cl1ii0.80 (3)2.83 (3)3.464 (2)138 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H1n⋯N1i0.88 (3)2.08 (3)2.965 (3)176 (3)
N2—H2n⋯Cl1ii0.80 (3)2.83 (3)3.464 (2)138 (3)

Symmetry codes: (i) ; (ii) .

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