| Literature DB >> 21580713 |
Sébastien Clément, Olivier Coulembier, Franck Meyer, Matthias Zeller, Christophe M L Vande Velde.
Abstract
The reaction of thio-phene-3-carboxaldehyde and perfluoro-benzyl-triphenyl-phospho-nium bromide in the presence of sodium hydride gave the title compound, C(12)H(5)F(5)S, in 70% yield. The thiophene and perfluorophenyl groups form a dihedral angle of 5.4 (2)°. The structure is characterized by a head-to-tail organization in a columnar arrangement due to π-π inter-actions between the thio-phene and penta-fluoro-phenyl rings with centroid-centroid distances in the range 3.698 (2)-3.802 (2) Å.Entities:
Year: 2010 PMID: 21580713 PMCID: PMC2983909 DOI: 10.1107/S1600536810009992
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H5F5S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2814 reflections |
| θ = 2.9–31.1° | |
| µ = 0.36 mm−1 | |
| β = 94.953 (4)° | Plate, colourless |
| 0.31 × 0.21 × 0.05 mm | |
| Bruker SMART APEX area-detector diffractometer | 3056 independent reflections |
| Radiation source: fine-focus sealed tube | 2513 reflections with |
| graphite | |
| ω scans | θmax = 31.2°, θmin = 1.7° |
| Absorption correction: multi-scan ( | |
| 5781 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3056 reflections | (Δ/σ)max < 0.001 |
| 163 parameters | Δρmax = 0.73 e Å−3 |
| 0 restraints | Δρmin = −0.58 e Å−3 |
| 3 constraints |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.22542 (18) | 0.54717 (4) | 0.56342 (15) | 0.0219 (2) | |
| F9 | −0.0433 (4) | 0.80297 (10) | 0.4285 (3) | 0.0200 (5) | |
| F10 | −0.0888 (4) | 0.91035 (10) | 0.4229 (3) | 0.0211 (5) | |
| F12 | 0.6511 (4) | 0.93050 (10) | 0.7310 (3) | 0.0218 (5) | |
| F13 | 0.6987 (4) | 0.82233 (10) | 0.7475 (3) | 0.0205 (5) | |
| F11 | 0.2579 (5) | 0.97589 (10) | 0.5694 (4) | 0.0244 (5) | |
| C4 | 0.4895 (7) | 0.62804 (17) | 0.6462 (5) | 0.0181 (7) | |
| H4 | 0.6168 | 0.6489 | 0.6883 | 0.022* | |
| C13 | 0.5023 (6) | 0.84305 (17) | 0.6626 (5) | 0.0160 (7) | |
| C3 | 0.2770 (6) | 0.65098 (16) | 0.5703 (5) | 0.0154 (7) | |
| C8 | 0.3328 (6) | 0.80732 (16) | 0.5885 (5) | 0.0154 (7) | |
| C12 | 0.4805 (6) | 0.89877 (16) | 0.6571 (5) | 0.0162 (7) | |
| C11 | 0.2808 (7) | 0.92176 (16) | 0.5756 (5) | 0.0188 (8) | |
| C9 | 0.1336 (7) | 0.83262 (16) | 0.5062 (5) | 0.0161 (7) | |
| C6 | 0.2239 (7) | 0.70861 (16) | 0.5483 (5) | 0.0183 (7) | |
| H6 | 0.0793 | 0.7182 | 0.4934 | 0.022* | |
| C10 | 0.1082 (7) | 0.88846 (17) | 0.5015 (5) | 0.0185 (8) | |
| C7 | 0.3708 (7) | 0.74870 (16) | 0.6022 (5) | 0.0178 (7) | |
| H7 | 0.5149 | 0.7378 | 0.6548 | 0.021* | |
| C2 | 0.1186 (7) | 0.61079 (17) | 0.5195 (5) | 0.0179 (7) | |
| H2 | −0.0301 | 0.6177 | 0.4670 | 0.022* | |
| C5 | 0.4880 (7) | 0.57227 (17) | 0.6512 (5) | 0.0177 (7) | |
| H5 | 0.6123 | 0.5509 | 0.6961 | 0.021* |
| S1 | 0.0228 (5) | 0.0195 (5) | 0.0229 (5) | −0.0009 (4) | −0.0003 (4) | −0.0008 (4) |
| F9 | 0.0164 (11) | 0.0213 (12) | 0.0216 (12) | −0.0008 (9) | −0.0019 (9) | −0.0022 (9) |
| F10 | 0.0163 (11) | 0.0242 (13) | 0.0219 (12) | 0.0053 (9) | −0.0039 (9) | 0.0004 (10) |
| F12 | 0.0203 (11) | 0.0239 (13) | 0.0210 (12) | −0.0070 (10) | −0.0004 (9) | −0.0039 (10) |
| F13 | 0.0150 (10) | 0.0257 (13) | 0.0199 (12) | 0.0008 (9) | −0.0033 (9) | −0.0005 (9) |
| F11 | 0.0309 (13) | 0.0179 (12) | 0.0240 (13) | 0.0007 (10) | 0.0003 (10) | −0.0014 (10) |
| C4 | 0.0169 (16) | 0.0215 (19) | 0.0159 (16) | −0.0013 (14) | 0.0018 (13) | −0.0014 (15) |
| C13 | 0.0131 (15) | 0.024 (2) | 0.0107 (15) | 0.0005 (14) | 0.0010 (12) | 0.0007 (14) |
| C3 | 0.0158 (16) | 0.0196 (19) | 0.0107 (15) | 0.0011 (13) | 0.0010 (13) | −0.0002 (13) |
| C8 | 0.0136 (16) | 0.0198 (19) | 0.0133 (16) | 0.0009 (13) | 0.0035 (13) | 0.0000 (14) |
| C12 | 0.0150 (16) | 0.0206 (19) | 0.0129 (16) | −0.0048 (14) | 0.0013 (13) | −0.0023 (14) |
| C11 | 0.026 (2) | 0.0166 (19) | 0.0137 (17) | 0.0001 (15) | 0.0035 (15) | −0.0014 (14) |
| C9 | 0.0158 (16) | 0.0185 (19) | 0.0141 (16) | −0.0014 (14) | 0.0013 (13) | 0.0011 (14) |
| C6 | 0.0206 (17) | 0.0199 (19) | 0.0148 (17) | 0.0032 (15) | 0.0028 (13) | 0.0011 (14) |
| C10 | 0.0163 (17) | 0.023 (2) | 0.0170 (17) | 0.0047 (14) | 0.0036 (14) | 0.0018 (15) |
| C7 | 0.0201 (17) | 0.0189 (19) | 0.0144 (16) | 0.0018 (14) | 0.0010 (14) | −0.0002 (14) |
| C2 | 0.0156 (17) | 0.022 (2) | 0.0152 (16) | −0.0009 (14) | −0.0018 (13) | −0.0003 (14) |
| C5 | 0.0170 (17) | 0.022 (2) | 0.0133 (16) | 0.0035 (14) | −0.0020 (13) | −0.0002 (14) |
| S1—C2 | 1.703 (4) | C3—C2 | 1.380 (5) |
| S1—C5 | 1.718 (4) | C3—C6 | 1.456 (5) |
| F9—C9 | 1.345 (4) | C8—C9 | 1.403 (5) |
| F10—C10 | 1.348 (4) | C8—C7 | 1.460 (5) |
| F12—C12 | 1.338 (4) | C12—C11 | 1.379 (6) |
| F13—C13 | 1.350 (4) | C11—C10 | 1.370 (6) |
| F11—C11 | 1.338 (5) | C9—C10 | 1.381 (6) |
| C4—C5 | 1.371 (6) | C6—C7 | 1.341 (6) |
| C4—C3 | 1.425 (5) | C6—H6 | 0.9300 |
| C4—H4 | 0.9300 | C7—H7 | 0.9300 |
| C13—C12 | 1.376 (6) | C2—H2 | 0.9300 |
| C13—C8 | 1.394 (5) | C5—H5 | 0.9300 |
| S1···S1i | 3.5611 (17) | F10···H5iii | 2.49 |
| F9···F13ii | 2.921 (3) | H5···F11iv | 2.59 |
| F10···F12ii | 2.865 (3) | H2···F13iii | 2.61 |
| F10···C12ii | 3.166 (4) | C3···C9v | 3.392 (5) |
| F10···C5iii | 3.056 (5) | C3···C13vi | 3.365 (5) |
| C2—S1—C5 | 92.19 (19) | F9—C9—C10 | 116.9 (3) |
| C5—C4—C3 | 113.5 (4) | F9—C9—C8 | 120.9 (3) |
| C5—C4—H4 | 123.3 | C10—C9—C8 | 122.3 (4) |
| C3—C4—H4 | 123.3 | C7—C6—C3 | 124.0 (4) |
| F13—C13—C12 | 117.4 (3) | C7—C6—H6 | 118.0 |
| F13—C13—C8 | 118.8 (4) | C3—C6—H6 | 118.0 |
| C12—C13—C8 | 123.7 (4) | F10—C10—C11 | 119.8 (4) |
| C2—C3—C4 | 110.9 (4) | F10—C10—C9 | 119.5 (4) |
| C2—C3—C6 | 122.5 (4) | C11—C10—C9 | 120.7 (4) |
| C4—C3—C6 | 126.6 (4) | C6—C7—C8 | 128.1 (4) |
| C13—C8—C9 | 114.6 (4) | C6—C7—H7 | 116.0 |
| C13—C8—C7 | 119.8 (3) | C8—C7—H7 | 116.0 |
| C9—C8—C7 | 125.5 (4) | C3—C2—S1 | 112.5 (3) |
| F12—C12—C13 | 120.3 (3) | C3—C2—H2 | 123.7 |
| F12—C12—C11 | 120.2 (4) | S1—C2—H2 | 123.7 |
| C13—C12—C11 | 119.5 (4) | C4—C5—S1 | 110.9 (3) |
| F11—C11—C10 | 120.9 (4) | C4—C5—H5 | 124.6 |
| F11—C11—C12 | 120.0 (4) | S1—C5—H5 | 124.6 |
| C10—C11—C12 | 119.1 (4) | ||
| C5—C4—C3—C2 | 0.0 (5) | C2—C3—C6—C7 | 177.5 (4) |
| C5—C4—C3—C6 | 179.3 (4) | C4—C3—C6—C7 | −1.7 (6) |
| F13—C13—C8—C9 | 178.9 (3) | F11—C11—C10—F10 | −0.7 (6) |
| C12—C13—C8—C9 | −0.1 (6) | C12—C11—C10—F10 | 179.4 (3) |
| F13—C13—C8—C7 | −0.6 (5) | F11—C11—C10—C9 | 179.2 (4) |
| C12—C13—C8—C7 | −179.6 (4) | C12—C11—C10—C9 | −0.6 (6) |
| F13—C13—C12—F12 | 1.1 (5) | F9—C9—C10—F10 | 0.7 (5) |
| C8—C13—C12—F12 | −179.9 (3) | C8—C9—C10—F10 | −179.0 (3) |
| F13—C13—C12—C11 | −178.5 (3) | F9—C9—C10—C11 | −179.3 (3) |
| C8—C13—C12—C11 | 0.5 (6) | C8—C9—C10—C11 | 1.1 (6) |
| F12—C12—C11—F11 | 0.4 (6) | C3—C6—C7—C8 | −179.1 (4) |
| C13—C12—C11—F11 | −180.0 (4) | C13—C8—C7—C6 | 176.1 (4) |
| F12—C12—C11—C10 | −179.7 (4) | C9—C8—C7—C6 | −3.3 (7) |
| C13—C12—C11—C10 | −0.1 (6) | C4—C3—C2—S1 | 0.1 (4) |
| C13—C8—C9—F9 | 179.7 (3) | C6—C3—C2—S1 | −179.2 (3) |
| C7—C8—C9—F9 | −0.9 (6) | C5—S1—C2—C3 | −0.2 (3) |
| C13—C8—C9—C10 | −0.7 (6) | C3—C4—C5—S1 | −0.2 (4) |
| C7—C8—C9—C10 | 178.8 (4) | C2—S1—C5—C4 | 0.2 (3) |