| Literature DB >> 21580669 |
Mehrdad Pourayoubi, Maryam Toghraee, Arnold L Rheingold, James A Golen.
Abstract
The title salt, C(6)H(9)N(2) (+)·C(2)F(3)O(2) (-), is a monoclinic polymorph of a previously reported structure [Hemamalini & Fun (2010). Acta Cryst. E66, o781-o782]. In the crystal structure, the cations and anions are linked by two different types of N-H⋯O hydrogen bonds, forming cation-anion pairs. These pairs are hydrogen bonded to neighbouring pairs via another N-H⋯O hydrogen bonds involving an H atom of the NH(2) group and one of the O atoms of the COO(-) group into a chain extended along the b axis.Entities:
Year: 2010 PMID: 21580669 PMCID: PMC2983996 DOI: 10.1107/S1600536810008408
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H9N2+·C2F3O2− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 5265 reflections |
| θ = 2.7–28.0° | |
| µ = 0.15 mm−1 | |
| β = 90.820 (1)° | Block, colorless |
| 0.30 × 0.20 × 0.10 mm | |
| Bruker SMART APEX diffractometer | 1784 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 28.2°, θmin = 2.4° |
| φ and ω scans | |
| 10752 measured reflections | |
| 2197 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 2197 reflections | Δρmax = 0.29 e Å−3 |
| 150 parameters | Δρmin = −0.23 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0084 (16) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| F1 | 0.16929 (11) | 0.27679 (7) | 1.06142 (10) | 0.0350 (2) | |
| F2 | 0.08357 (10) | 0.40806 (8) | 0.92121 (10) | 0.0358 (2) | |
| F3 | 0.25375 (10) | 0.45302 (7) | 1.07851 (9) | 0.0316 (2) | |
| O1 | 0.36035 (11) | 0.23798 (8) | 0.85540 (11) | 0.0259 (2) | |
| O2 | 0.41240 (11) | 0.42938 (8) | 0.83832 (10) | 0.0257 (2) | |
| N1 | 0.61429 (13) | 0.37742 (9) | 0.62595 (12) | 0.0212 (2) | |
| H1B | 0.544 (2) | 0.3930 (17) | 0.699 (2) | 0.048 (5)* | |
| N2 | 0.56684 (13) | 0.18015 (10) | 0.63958 (12) | 0.0223 (3) | |
| H2C | 0.504 (2) | 0.1964 (16) | 0.711 (2) | 0.040 (5)* | |
| H2B | 0.588 (2) | 0.1040 (16) | 0.6158 (18) | 0.034 (5)* | |
| C1 | 0.68436 (16) | 0.47274 (12) | 0.56989 (15) | 0.0251 (3) | |
| H1A | 0.6618 | 0.5480 | 0.6049 | 0.030* | |
| C2 | 0.78596 (16) | 0.46100 (12) | 0.46475 (15) | 0.0250 (3) | |
| H2A | 0.8341 | 0.5277 | 0.4261 | 0.030* | |
| C3 | 0.81986 (15) | 0.34848 (12) | 0.41287 (14) | 0.0214 (3) | |
| C4 | 0.74763 (14) | 0.25417 (11) | 0.47012 (13) | 0.0206 (3) | |
| H4A | 0.7689 | 0.1784 | 0.4359 | 0.025* | |
| C5 | 0.64122 (14) | 0.26797 (11) | 0.58005 (14) | 0.0196 (3) | |
| C6 | 0.93335 (16) | 0.33574 (13) | 0.29694 (15) | 0.0260 (3) | |
| H6A | 0.9287 | 0.2560 | 0.2612 | 0.039* | |
| H6B | 1.0398 | 0.3523 | 0.3307 | 0.039* | |
| H6C | 0.9055 | 0.3905 | 0.2233 | 0.039* | |
| C7 | 0.34308 (14) | 0.34184 (11) | 0.88424 (14) | 0.0200 (3) | |
| C8 | 0.21258 (15) | 0.36940 (11) | 0.98849 (15) | 0.0236 (3) |
| F1 | 0.0412 (5) | 0.0257 (5) | 0.0385 (5) | −0.0036 (4) | 0.0209 (4) | 0.0027 (4) |
| F2 | 0.0220 (4) | 0.0367 (5) | 0.0488 (6) | 0.0070 (3) | 0.0017 (4) | −0.0026 (4) |
| F3 | 0.0328 (5) | 0.0271 (5) | 0.0350 (5) | −0.0012 (3) | 0.0096 (4) | −0.0114 (4) |
| O1 | 0.0294 (5) | 0.0168 (5) | 0.0319 (6) | −0.0008 (4) | 0.0099 (4) | −0.0027 (4) |
| O2 | 0.0292 (5) | 0.0179 (5) | 0.0303 (6) | −0.0033 (4) | 0.0105 (4) | 0.0005 (4) |
| N1 | 0.0223 (5) | 0.0177 (5) | 0.0237 (6) | 0.0006 (4) | 0.0044 (4) | −0.0015 (5) |
| N2 | 0.0250 (6) | 0.0168 (6) | 0.0253 (6) | −0.0007 (4) | 0.0073 (5) | −0.0007 (5) |
| C1 | 0.0272 (7) | 0.0168 (6) | 0.0314 (8) | −0.0007 (5) | 0.0026 (6) | −0.0014 (5) |
| C2 | 0.0250 (7) | 0.0200 (7) | 0.0302 (8) | −0.0033 (5) | 0.0032 (5) | 0.0040 (5) |
| C3 | 0.0181 (6) | 0.0239 (7) | 0.0223 (7) | −0.0005 (5) | 0.0013 (5) | 0.0008 (5) |
| C4 | 0.0206 (6) | 0.0187 (6) | 0.0224 (7) | 0.0006 (5) | 0.0019 (5) | −0.0010 (5) |
| C5 | 0.0185 (6) | 0.0181 (6) | 0.0221 (6) | 0.0003 (4) | −0.0005 (5) | −0.0005 (5) |
| C6 | 0.0236 (7) | 0.0298 (7) | 0.0247 (7) | −0.0021 (5) | 0.0052 (5) | 0.0023 (6) |
| C7 | 0.0200 (6) | 0.0185 (6) | 0.0217 (7) | −0.0005 (5) | 0.0022 (5) | −0.0010 (5) |
| C8 | 0.0227 (6) | 0.0182 (6) | 0.0299 (7) | −0.0008 (5) | 0.0060 (5) | −0.0015 (5) |
| F1—C8 | 1.3337 (15) | C1—H1A | 0.9500 |
| F2—C8 | 1.3475 (16) | C2—C3 | 1.4190 (19) |
| F3—C8 | 1.3429 (16) | C2—H2A | 0.9500 |
| O1—C7 | 1.2352 (15) | C3—C4 | 1.3688 (18) |
| O2—C7 | 1.2523 (15) | C3—C6 | 1.5033 (18) |
| N1—C5 | 1.3552 (16) | C4—C5 | 1.4209 (17) |
| N1—C1 | 1.3650 (17) | C4—H4A | 0.9500 |
| N1—H1B | 0.952 (19) | C6—H6A | 0.9800 |
| N2—C5 | 1.3290 (16) | C6—H6B | 0.9800 |
| N2—H2C | 0.901 (18) | C6—H6C | 0.9800 |
| N2—H2B | 0.923 (18) | C7—C8 | 1.5490 (18) |
| C1—C2 | 1.356 (2) | ||
| C5—N1—C1 | 122.40 (12) | N2—C5—N1 | 118.49 (12) |
| C5—N1—H1B | 122.1 (12) | N2—C5—C4 | 123.85 (12) |
| C1—N1—H1B | 115.5 (12) | N1—C5—C4 | 117.67 (12) |
| C5—N2—H2C | 118.0 (12) | C3—C6—H6A | 109.5 |
| C5—N2—H2B | 121.1 (11) | C3—C6—H6B | 109.5 |
| H2C—N2—H2B | 120.5 (16) | H6A—C6—H6B | 109.5 |
| C2—C1—N1 | 120.62 (12) | C3—C6—H6C | 109.5 |
| C2—C1—H1A | 119.7 | H6A—C6—H6C | 109.5 |
| N1—C1—H1A | 119.7 | H6B—C6—H6C | 109.5 |
| C1—C2—C3 | 119.61 (12) | O1—C7—O2 | 129.54 (12) |
| C1—C2—H2A | 120.2 | O1—C7—C8 | 115.80 (11) |
| C3—C2—H2A | 120.2 | O2—C7—C8 | 114.62 (11) |
| C4—C3—C2 | 118.79 (12) | F1—C8—F3 | 107.24 (12) |
| C4—C3—C6 | 121.75 (12) | F1—C8—F2 | 106.89 (11) |
| C2—C3—C6 | 119.46 (12) | F3—C8—F2 | 106.54 (10) |
| C3—C4—C5 | 120.90 (12) | F1—C8—C7 | 113.06 (11) |
| C3—C4—H4A | 119.5 | F3—C8—C7 | 112.88 (11) |
| C5—C4—H4A | 119.5 | F2—C8—C7 | 109.85 (11) |
| C5—N1—C1—C2 | −0.3 (2) | C3—C4—C5—N2 | 179.68 (13) |
| N1—C1—C2—C3 | −0.1 (2) | C3—C4—C5—N1 | −0.10 (19) |
| C1—C2—C3—C4 | 0.5 (2) | O1—C7—C8—F1 | 18.42 (18) |
| C1—C2—C3—C6 | −179.60 (13) | O2—C7—C8—F1 | −163.72 (12) |
| C2—C3—C4—C5 | −0.37 (19) | O1—C7—C8—F3 | 140.38 (12) |
| C6—C3—C4—C5 | 179.73 (12) | O2—C7—C8—F3 | −41.76 (17) |
| C1—N1—C5—N2 | −179.33 (12) | O1—C7—C8—F2 | −100.87 (14) |
| C1—N1—C5—C4 | 0.46 (19) | O2—C7—C8—F2 | 76.99 (14) |
| H··· | ||||
| N1—H1B···O2 | 0.952 (19) | 1.82 (2) | 2.7724 (14) | 177.4 (18) |
| N2—H2C···O1 | 0.901 (18) | 1.938 (19) | 2.8376 (15) | 176.3 (17) |
| N2—H2B···O2i | 0.923 (18) | 2.055 (18) | 2.8946 (15) | 150.5 (15) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.952 (19) | 1.82 (2) | 2.7724 (14) | 177.4 (18) |
| N2—H2 | 0.901 (18) | 1.938 (19) | 2.8376 (15) | 176.3 (17) |
| N2—H2 | 0.923 (18) | 2.055 (18) | 2.8946 (15) | 150.5 (15) |
Symmetry code: (i) .