Literature DB >> 21580663

7-Pivaloyl-5,6-dihydro-4H-naphtho[3,2,1-de]isoquinoline-4,6-dione.

Hai-Tao Yu1, Yi Wei, Yan Zhang.   

Abstract

In the crystal structure of the title compound, C(21)H(17)NO(3), the dibenzo-isoquinoline-dione unit has a planar structure, the maximum atomic deviation being 0.091 (3) Å. The crystal structure is stabilized by π-π stacking [centroid-centroid distance = 3.851 (2) Å] and inter-molecular N-H⋯O hydrogen bonding.

Entities:  

Year:  2010        PMID: 21580663      PMCID: PMC2984060          DOI: 10.1107/S1600536810008378

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound is an azonafide analogue. For the bio­logical activity of 1,3,4(2H)-isoquinoline­trione derivatives, see: Malamas et al. (1994 ▶); Hall et al. (1994 ▶). For the anti­tumor properties of azonafide and analogues, see: Sami et al. (2000 ▶); Hutchings et al. (1988 ▶). For the synthesis, see: Zhang et al. (2000 ▶).

Experimental

Crystal data

C21H17NO3 M = 331.36 Monoclinic, a = 11.569 (2) Å b = 9.1150 (18) Å c = 15.746 (3) Å β = 101.12 (3)° V = 1629.3 (6) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 298 K 0.10 × 0.10 × 0.05 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (CAD-4 EXPRESS; Enraf–Nonius, 1994 ▶) T min = 0.991, T max = 0.996 3103 measured reflections 2950 independent reflections 1264 reflections with I > 2σ(I) R int = 0.056 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.066 wR(F 2) = 0.077 S = 1.00 2950 reflections 226 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.19 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810008378/xu2713sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810008378/xu2713Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H17NO3F(000) = 696
Mr = 331.36Dx = 1.351 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 11.569 (2) Åθ = 9–12°
b = 9.1150 (18) ŵ = 0.09 mm1
c = 15.746 (3) ÅT = 298 K
β = 101.12 (3)°Block, light-yellow
V = 1629.3 (6) Å30.10 × 0.10 × 0.05 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer1264 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.056
graphiteθmax = 25.3°, θmin = 1.8°
ω/2θ scansh = 0→13
Absorption correction: ψ scan (CAD-4 EXPRESS; Enraf–Nonius, 1994)k = 0→10
Tmin = 0.991, Tmax = 0.996l = −18→18
3103 measured reflections3 standard reflections every 200 reflections
2950 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.066Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.077H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.001P)2] where P = (Fo2 + 2Fc2)/3
2950 reflections(Δ/σ)max < 0.001
226 parametersΔρmax = 0.19 e Å3
0 restraintsΔρmin = −0.18 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N0.9224 (2)0.3212 (3)0.52319 (16)0.0380 (8)
H0A0.94330.40460.54670.046*
O10.7998 (2)−0.0308 (3)0.72692 (14)0.0517 (7)
O20.9979 (2)0.3921 (2)0.40785 (14)0.0494 (7)
O30.8470 (2)0.2652 (2)0.64021 (14)0.0508 (7)
C10.5388 (3)−0.0139 (4)0.6829 (2)0.0769 (14)
H1A0.5228−0.08120.63520.115*
H1B0.46700.03330.68970.115*
H1C0.5713−0.06640.73490.115*
C20.5766 (3)0.1815 (4)0.5817 (2)0.0675 (13)
H2A0.56300.11230.53490.101*
H2B0.63100.25520.57040.101*
H2C0.50350.22710.58700.101*
C30.6483 (3)0.2081 (4)0.7420 (2)0.0781 (15)
H3A0.70270.28320.73260.117*
H3B0.68030.15510.79390.117*
H3C0.57500.25240.74780.117*
C40.6277 (3)0.1027 (4)0.6652 (2)0.0461 (10)
C50.7422 (3)0.0215 (4)0.6623 (2)0.0358 (9)
C60.7748 (3)−0.0144 (4)0.5757 (2)0.0337 (9)
C70.7494 (3)−0.1610 (4)0.5410 (2)0.0358 (9)
C80.7003 (3)−0.2677 (4)0.5887 (2)0.0504 (11)
H8A0.6861−0.24450.64330.061*
C90.6734 (3)−0.4046 (4)0.5553 (3)0.0584 (12)
H9A0.6409−0.47360.58740.070*
C100.6942 (3)−0.4420 (4)0.4742 (2)0.0560 (12)
H10A0.6738−0.53460.45140.067*
C110.7448 (3)−0.3419 (4)0.4277 (2)0.0457 (11)
H11A0.7606−0.36900.37420.055*
C120.7736 (3)−0.1988 (4)0.4589 (2)0.0351 (9)
C130.8287 (3)−0.0921 (4)0.4115 (2)0.0361 (9)
C140.8587 (3)0.0469 (4)0.4492 (2)0.0314 (9)
C150.8305 (3)0.0825 (4)0.5310 (2)0.0320 (9)
C160.8571 (3)−0.1202 (4)0.3306 (2)0.0430 (10)
H16A0.8379−0.21100.30480.052*
C170.9120 (3)−0.0188 (4)0.2882 (2)0.0480 (11)
H17A0.9299−0.04150.23460.058*
C180.9412 (3)0.1181 (4)0.3250 (2)0.0417 (10)
H18A0.97820.18720.29590.050*
C190.9154 (3)0.1513 (4)0.4046 (2)0.0324 (9)
C200.9491 (3)0.2966 (4)0.4427 (2)0.0358 (9)
C210.8659 (3)0.2269 (4)0.5700 (2)0.0364 (9)
U11U22U33U12U13U23
N0.052 (2)0.0271 (19)0.0377 (18)−0.0090 (16)0.0150 (16)−0.0042 (15)
O10.0629 (19)0.0489 (18)0.0445 (16)0.0042 (15)0.0135 (14)0.0078 (14)
O20.070 (2)0.0339 (16)0.0499 (16)−0.0110 (14)0.0247 (14)0.0060 (13)
O30.073 (2)0.0420 (17)0.0425 (15)−0.0127 (15)0.0247 (15)−0.0123 (13)
C10.061 (3)0.071 (3)0.109 (4)−0.017 (3)0.044 (3)0.007 (3)
C20.058 (3)0.052 (3)0.090 (3)0.008 (2)0.009 (3)0.009 (3)
C30.079 (3)0.070 (3)0.094 (3)0.002 (3)0.040 (3)−0.031 (3)
C40.046 (3)0.041 (3)0.054 (3)−0.001 (2)0.017 (2)−0.004 (2)
C50.050 (3)0.024 (2)0.035 (2)−0.004 (2)0.011 (2)0.0057 (18)
C60.044 (2)0.027 (2)0.030 (2)0.0027 (19)0.0083 (18)−0.0013 (18)
C70.044 (3)0.022 (2)0.042 (2)0.0019 (19)0.010 (2)0.0068 (19)
C80.067 (3)0.032 (2)0.056 (3)0.002 (2)0.020 (2)0.005 (2)
C90.074 (3)0.040 (3)0.067 (3)−0.005 (3)0.027 (3)0.007 (2)
C100.069 (3)0.026 (2)0.073 (3)−0.008 (2)0.014 (3)0.000 (2)
C110.057 (3)0.027 (2)0.052 (3)0.000 (2)0.005 (2)−0.007 (2)
C120.037 (2)0.028 (2)0.040 (2)0.0029 (19)0.0064 (19)−0.0003 (19)
C130.039 (2)0.035 (2)0.034 (2)0.002 (2)0.0067 (19)−0.0011 (19)
C140.032 (2)0.029 (2)0.034 (2)0.0041 (18)0.0072 (18)0.0045 (18)
C150.036 (2)0.026 (2)0.036 (2)0.0004 (18)0.0107 (18)−0.0004 (18)
C160.055 (3)0.034 (2)0.041 (2)0.006 (2)0.014 (2)−0.004 (2)
C170.069 (3)0.046 (3)0.033 (2)0.001 (2)0.020 (2)0.000 (2)
C180.052 (3)0.036 (2)0.039 (2)−0.003 (2)0.013 (2)−0.001 (2)
C190.037 (2)0.027 (2)0.034 (2)0.0038 (19)0.0084 (18)−0.0022 (18)
C200.046 (3)0.029 (2)0.033 (2)0.004 (2)0.0090 (19)0.0032 (18)
C210.038 (2)0.037 (2)0.037 (2)0.001 (2)0.0119 (19)−0.002 (2)
N—C211.376 (4)C7—C121.417 (4)
N—C201.379 (3)C8—C91.366 (4)
N—H0A0.8600C8—H8A0.9300
O1—C51.201 (3)C9—C101.387 (4)
O2—C201.224 (3)C9—H9A0.9300
O3—C211.219 (3)C10—C111.369 (4)
C1—C41.541 (4)C10—H10A0.9300
C1—H1A0.9600C11—C121.410 (4)
C1—H1B0.9600C11—H11A0.9300
C1—H1C0.9600C12—C131.447 (4)
C2—C41.514 (4)C13—C161.399 (4)
C2—H2A0.9600C13—C141.413 (4)
C2—H2B0.9600C14—C191.416 (4)
C2—H2C0.9600C14—C151.426 (4)
C3—C41.527 (4)C15—C211.476 (4)
C3—H3A0.9600C16—C171.366 (4)
C3—H3B0.9600C16—H16A0.9300
C3—H3C0.9600C17—C181.390 (4)
C4—C51.526 (4)C17—H17A0.9300
C5—C61.520 (4)C18—C191.378 (4)
C6—C151.365 (4)C18—H18A0.9300
C6—C71.452 (4)C19—C201.475 (4)
C7—C81.413 (4)
C21—N—C20127.1 (3)C8—C9—C10120.8 (4)
C21—N—H0A116.4C8—C9—H9A119.6
C20—N—H0A116.4C10—C9—H9A119.6
C4—C1—H1A109.5C11—C10—C9119.7 (4)
C4—C1—H1B109.5C11—C10—H10A120.1
H1A—C1—H1B109.5C9—C10—H10A120.1
C4—C1—H1C109.5C10—C11—C12121.8 (4)
H1A—C1—H1C109.5C10—C11—H11A119.1
H1B—C1—H1C109.5C12—C11—H11A119.1
C4—C2—H2A109.5C11—C12—C7117.8 (3)
C4—C2—H2B109.5C11—C12—C13122.7 (3)
H2A—C2—H2B109.5C7—C12—C13119.4 (3)
C4—C2—H2C109.5C16—C13—C14117.7 (3)
H2A—C2—H2C109.5C16—C13—C12123.4 (3)
H2B—C2—H2C109.5C14—C13—C12118.9 (3)
C4—C3—H3A109.5C13—C14—C19119.6 (3)
C4—C3—H3B109.5C13—C14—C15120.2 (3)
H3A—C3—H3B109.5C19—C14—C15120.2 (3)
C4—C3—H3C109.5C6—C15—C14122.1 (3)
H3A—C3—H3C109.5C6—C15—C21118.9 (3)
H3B—C3—H3C109.5C14—C15—C21119.0 (3)
C2—C4—C5113.6 (3)C17—C16—C13122.3 (3)
C2—C4—C3111.3 (3)C17—C16—H16A118.8
C5—C4—C3108.9 (3)C13—C16—H16A118.8
C2—C4—C1108.8 (3)C16—C17—C18120.1 (3)
C5—C4—C1106.5 (3)C16—C17—H17A120.0
C3—C4—C1107.4 (3)C18—C17—H17A120.0
O1—C5—C6118.8 (3)C19—C18—C17119.9 (3)
O1—C5—C4120.7 (3)C19—C18—H18A120.0
C6—C5—C4119.9 (3)C17—C18—H18A120.0
C15—C6—C7118.9 (3)C18—C19—C14120.4 (3)
C15—C6—C5123.1 (3)C18—C19—C20118.7 (3)
C7—C6—C5117.9 (3)C14—C19—C20120.9 (3)
C8—C7—C12119.2 (3)O2—C20—N120.0 (3)
C8—C7—C6120.4 (3)O2—C20—C19124.4 (3)
C12—C7—C6120.4 (3)N—C20—C19115.5 (3)
C9—C8—C7120.6 (4)O3—C21—N119.6 (3)
C9—C8—H8A119.7O3—C21—C15123.3 (3)
C7—C8—H8A119.7N—C21—C15117.2 (3)
C2—C4—C5—O1170.9 (3)C12—C13—C14—C15−2.5 (5)
C3—C4—C5—O146.3 (4)C7—C6—C15—C143.4 (5)
C1—C4—C5—O1−69.3 (4)C5—C6—C15—C14−179.1 (3)
C2—C4—C5—C6−18.5 (5)C7—C6—C15—C21−174.6 (3)
C3—C4—C5—C6−143.2 (3)C5—C6—C15—C212.9 (5)
C1—C4—C5—C6101.2 (4)C13—C14—C15—C60.2 (5)
O1—C5—C6—C15−105.0 (4)C19—C14—C15—C6179.3 (3)
C4—C5—C6—C1584.3 (4)C13—C14—C15—C21178.3 (3)
O1—C5—C6—C772.5 (4)C19—C14—C15—C21−2.7 (5)
C4—C5—C6—C7−98.2 (4)C14—C13—C16—C170.1 (5)
C15—C6—C7—C8175.1 (3)C12—C13—C16—C17−178.2 (3)
C5—C6—C7—C8−2.5 (5)C13—C16—C17—C18−0.3 (6)
C15—C6—C7—C12−4.9 (5)C16—C17—C18—C190.4 (5)
C5—C6—C7—C12177.5 (3)C17—C18—C19—C14−0.3 (5)
C12—C7—C8—C9−1.7 (6)C17—C18—C19—C20179.0 (3)
C6—C7—C8—C9178.3 (4)C13—C14—C19—C180.1 (5)
C7—C8—C9—C100.2 (6)C15—C14—C19—C18−179.0 (3)
C8—C9—C10—C111.6 (6)C13—C14—C19—C20−179.2 (3)
C9—C10—C11—C12−2.0 (6)C15—C14—C19—C201.7 (5)
C10—C11—C12—C70.5 (5)C21—N—C20—O2178.6 (3)
C10—C11—C12—C13179.0 (4)C21—N—C20—C19−1.6 (5)
C8—C7—C12—C111.3 (5)C18—C19—C20—O20.9 (6)
C6—C7—C12—C11−178.7 (3)C14—C19—C20—O2−179.8 (3)
C8—C7—C12—C13−177.3 (3)C18—C19—C20—N−178.9 (3)
C6—C7—C12—C132.7 (5)C14—C19—C20—N0.4 (5)
C11—C12—C13—C160.7 (5)C20—N—C21—O3−179.0 (3)
C7—C12—C13—C16179.3 (3)C20—N—C21—C150.6 (5)
C11—C12—C13—C14−177.6 (3)C6—C15—C21—O3−0.7 (5)
C7—C12—C13—C141.0 (5)C14—C15—C21—O3−178.8 (3)
C16—C13—C14—C190.0 (5)C6—C15—C21—N179.6 (3)
C12—C13—C14—C19178.4 (3)C14—C15—C21—N1.6 (5)
C16—C13—C14—C15179.1 (3)
D—H···AD—HH···AD···AD—H···A
N—H0A···O2i0.862.052.911 (3)174
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N—H0A⋯O2i0.862.052.911 (3)174

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Novel spirosuccinimide aldose reductase inhibitors derived from isoquinoline-1,3-diones: 2-[(4-bromo-2-fluorophenyl)methyl]-6- fluorospiro[isoquinoline-4(1H),3'-pyrrolidine]-1,2',3,5'(2H)-tetrone and congeners. 1.

Authors:  M S Malamas; T C Hohman; J Millen
Journal:  J Med Chem       Date:  1994-06-24       Impact factor: 7.446

3.  Analogues of amonafide and azonafide with novel ring systems.

Authors:  S M Sami; R T Dorr; D S Alberts; A M Sólyom; W A Remers
Journal:  J Med Chem       Date:  2000-08-10       Impact factor: 7.446

4.  The cytotoxic activity of cyclic imido alkyl ethers, thioethers, sulfoxides, sulfones and related derivatives.

Authors:  I H Hall; J M Chapman; O T Wong
Journal:  Anticancer Drugs       Date:  1994-02       Impact factor: 2.248

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.