| Literature DB >> 21580601 |
S Dahmani, A Haoudi, F Capet, El Mokhtar Essassi, Seik Weng Ng.
Abstract
The room-temperature reaction of propargyl bromide and 6-bromo-1,3-dihydro-imidazo[4,5-b]pyridin-2-one in dimethyl-formamide yields the title compound, C(12)H(8)BrN(3)O, which features nitro-gen-bound propynyl substituents. The imidazopyridine fused ring is almost planar (r.m.s. deviation = 0.011 Å); the propynyl chains point in opposite directions relative to the fused ring. One acetyl-enic H atom is hydrogen bonded to the carbonyl O atom of an inversion-related mol-ecule, forming a dimer; adjacent dimers are linked by a second acetyl-ene-pyridine C-H⋯N inter-action, forming a layer motif.Entities:
Year: 2010 PMID: 21580601 PMCID: PMC2983980 DOI: 10.1107/S1600536810007701
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H8BrN3O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 9924 reflections |
| θ = 2.3–31.8° | |
| µ = 3.52 mm−1 | |
| β = 102.995 (1)° | Prism, yellow |
| 0.35 × 0.30 × 0.15 mm | |
| Bruker X8 APEXII diffractometer | 3383 independent reflections |
| Radiation source: fine-focus sealed tube | 2810 reflections with |
| graphite | |
| φ and ω scans | θmax = 30.0°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 27315 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3383 reflections | (Δ/σ)max = 0.001 |
| 162 parameters | Δρmax = 0.87 e Å−3 |
| 2 restraints | Δρmin = −0.80 e Å−3 |
| Br1 | 0.40313 (3) | 0.071904 (9) | 0.35455 (3) | 0.05174 (9) | |
| O1 | 0.32318 (15) | 0.47483 (7) | 0.3528 (2) | 0.0435 (3) | |
| N1 | 0.12161 (15) | 0.24467 (8) | 0.3731 (2) | 0.0354 (3) | |
| N2 | 0.18505 (15) | 0.37028 (8) | 0.3651 (2) | 0.0326 (3) | |
| N3 | 0.42693 (14) | 0.35966 (7) | 0.35770 (18) | 0.0289 (3) | |
| C1 | 0.1822 (2) | 0.17839 (9) | 0.3720 (2) | 0.0368 (4) | |
| H1 | 0.1213 | 0.1387 | 0.3786 | 0.044* | |
| C2 | 0.3302 (2) | 0.16693 (8) | 0.3614 (2) | 0.0322 (3) | |
| C3 | 0.43018 (17) | 0.22350 (8) | 0.3550 (2) | 0.0289 (3) | |
| H3 | 0.5302 | 0.2161 | 0.3481 | 0.035* | |
| C4 | 0.21635 (17) | 0.29782 (8) | 0.3662 (2) | 0.0279 (3) | |
| C5 | 0.36927 (16) | 0.29091 (8) | 0.3596 (2) | 0.0251 (3) | |
| C6 | 0.0418 (2) | 0.40256 (12) | 0.3799 (3) | 0.0457 (4) | |
| H6A | 0.0621 | 0.4471 | 0.4522 | 0.055* | |
| H6B | −0.0093 | 0.3705 | 0.4524 | 0.055* | |
| C7 | −0.0586 (2) | 0.41743 (12) | 0.1911 (3) | 0.0484 (5) | |
| C8 | −0.1389 (3) | 0.43130 (16) | 0.0410 (4) | 0.0699 (8) | |
| H8 | −0.212 (3) | 0.442 (2) | −0.073 (3) | 0.108 (13)* | |
| C9 | 0.31325 (18) | 0.40998 (9) | 0.3577 (2) | 0.0307 (3) | |
| C10 | 0.58352 (18) | 0.38016 (10) | 0.3664 (3) | 0.0380 (4) | |
| H10A | 0.5957 | 0.4311 | 0.3946 | 0.046* | |
| H10B | 0.6068 | 0.3718 | 0.2408 | 0.046* | |
| C11 | 0.68988 (18) | 0.33965 (10) | 0.5150 (3) | 0.0397 (4) | |
| C12 | 0.7772 (2) | 0.30575 (14) | 0.6294 (4) | 0.0559 (6) | |
| H12 | 0.849 (2) | 0.2804 (13) | 0.721 (3) | 0.070 (8)* |
| Br1 | 0.07831 (18) | 0.02651 (10) | 0.04492 (13) | 0.00475 (8) | 0.00231 (10) | −0.00343 (6) |
| O1 | 0.0484 (7) | 0.0281 (6) | 0.0488 (7) | 0.0041 (5) | −0.0001 (6) | 0.0039 (5) |
| N1 | 0.0277 (6) | 0.0436 (8) | 0.0344 (7) | −0.0079 (6) | 0.0059 (5) | −0.0006 (6) |
| N2 | 0.0261 (6) | 0.0344 (7) | 0.0357 (7) | 0.0063 (5) | 0.0039 (5) | 0.0004 (5) |
| N3 | 0.0234 (6) | 0.0261 (6) | 0.0353 (6) | −0.0012 (4) | 0.0023 (5) | 0.0030 (5) |
| C1 | 0.0402 (9) | 0.0356 (8) | 0.0330 (8) | −0.0124 (7) | 0.0050 (7) | −0.0002 (6) |
| C2 | 0.0437 (9) | 0.0262 (7) | 0.0246 (7) | −0.0018 (6) | 0.0036 (6) | −0.0010 (5) |
| C3 | 0.0291 (7) | 0.0294 (7) | 0.0276 (7) | 0.0028 (5) | 0.0051 (6) | 0.0003 (5) |
| C4 | 0.0248 (7) | 0.0332 (7) | 0.0240 (6) | 0.0005 (5) | 0.0022 (5) | −0.0001 (5) |
| C5 | 0.0237 (6) | 0.0269 (7) | 0.0236 (6) | −0.0015 (5) | 0.0034 (5) | 0.0005 (5) |
| C6 | 0.0346 (9) | 0.0554 (11) | 0.0481 (10) | 0.0163 (8) | 0.0114 (8) | −0.0029 (9) |
| C7 | 0.0306 (9) | 0.0535 (11) | 0.0610 (12) | 0.0143 (8) | 0.0101 (8) | 0.0079 (9) |
| C8 | 0.0452 (13) | 0.093 (2) | 0.0672 (16) | 0.0256 (12) | 0.0040 (11) | 0.0159 (13) |
| C9 | 0.0304 (7) | 0.0294 (7) | 0.0286 (7) | 0.0028 (6) | −0.0014 (6) | 0.0018 (6) |
| C10 | 0.0274 (7) | 0.0392 (9) | 0.0457 (9) | −0.0064 (6) | 0.0047 (7) | 0.0103 (7) |
| C11 | 0.0236 (7) | 0.0455 (9) | 0.0482 (10) | −0.0043 (6) | 0.0042 (7) | 0.0049 (8) |
| C12 | 0.0307 (9) | 0.0659 (14) | 0.0661 (14) | 0.0016 (9) | 0.0002 (9) | 0.0171 (11) |
| Br1—C2 | 1.8935 (16) | C3—C5 | 1.375 (2) |
| O1—C9 | 1.212 (2) | C3—H3 | 0.9300 |
| N1—C4 | 1.319 (2) | C4—C5 | 1.405 (2) |
| N1—C1 | 1.352 (2) | C6—C7 | 1.463 (3) |
| N2—C4 | 1.378 (2) | C6—H6A | 0.9700 |
| N2—C9 | 1.389 (2) | C6—H6B | 0.9700 |
| N2—C6 | 1.457 (2) | C7—C8 | 1.173 (3) |
| N3—C5 | 1.3842 (19) | C8—H8 | 0.948 (10) |
| N3—C9 | 1.394 (2) | C10—C11 | 1.466 (2) |
| N3—C10 | 1.459 (2) | C10—H10A | 0.9700 |
| C1—C2 | 1.379 (3) | C10—H10B | 0.9700 |
| C1—H1 | 0.9300 | C11—C12 | 1.179 (3) |
| C2—C3 | 1.397 (2) | C12—H12 | 0.939 (10) |
| C4—N1—C1 | 114.56 (14) | N3—C5—C4 | 107.09 (13) |
| C4—N2—C9 | 110.37 (13) | N2—C6—C7 | 113.27 (16) |
| C4—N2—C6 | 126.11 (16) | N2—C6—H6A | 108.9 |
| C9—N2—C6 | 123.44 (15) | C7—C6—H6A | 108.9 |
| C5—N3—C9 | 109.91 (13) | N2—C6—H6B | 108.9 |
| C5—N3—C10 | 127.46 (14) | C7—C6—H6B | 108.9 |
| C9—N3—C10 | 122.53 (14) | H6A—C6—H6B | 107.7 |
| N1—C1—C2 | 122.96 (15) | C8—C7—C6 | 178.2 (3) |
| N1—C1—H1 | 118.5 | C7—C8—H8 | 174 (2) |
| C2—C1—H1 | 118.5 | O1—C9—N2 | 126.84 (15) |
| C1—C2—C3 | 122.16 (15) | O1—C9—N3 | 127.61 (16) |
| C1—C2—Br1 | 119.74 (12) | N2—C9—N3 | 105.55 (13) |
| C3—C2—Br1 | 118.10 (13) | N3—C10—C11 | 111.93 (14) |
| C5—C3—C2 | 114.86 (14) | N3—C10—H10A | 109.2 |
| C5—C3—H3 | 122.6 | C11—C10—H10A | 109.2 |
| C2—C3—H3 | 122.6 | N3—C10—H10B | 109.2 |
| N1—C4—N2 | 126.85 (15) | C11—C10—H10B | 109.2 |
| N1—C4—C5 | 126.10 (15) | H10A—C10—H10B | 107.9 |
| N2—C4—C5 | 107.05 (13) | C12—C11—C10 | 177.6 (2) |
| C3—C5—N3 | 133.58 (14) | C11—C12—H12 | 177.7 (17) |
| C3—C5—C4 | 119.33 (14) | ||
| C4—N1—C1—C2 | −1.0 (2) | N1—C4—C5—C3 | 1.7 (2) |
| N1—C1—C2—C3 | 1.4 (3) | N2—C4—C5—C3 | −178.61 (13) |
| N1—C1—C2—Br1 | −178.53 (12) | N1—C4—C5—N3 | −178.81 (14) |
| C1—C2—C3—C5 | −0.2 (2) | N2—C4—C5—N3 | 0.92 (16) |
| Br1—C2—C3—C5 | 179.73 (10) | C4—N2—C6—C7 | −93.3 (2) |
| C1—N1—C4—N2 | 179.82 (15) | C9—N2—C6—C7 | 90.2 (2) |
| C1—N1—C4—C5 | −0.5 (2) | C4—N2—C9—O1 | 179.15 (16) |
| C9—N2—C4—N1 | 179.78 (15) | C6—N2—C9—O1 | −3.9 (3) |
| C6—N2—C4—N1 | 2.9 (3) | C4—N2—C9—N3 | −0.99 (17) |
| C9—N2—C4—C5 | 0.05 (17) | C6—N2—C9—N3 | 175.99 (15) |
| C6—N2—C4—C5 | −176.84 (15) | C5—N3—C9—O1 | −178.56 (16) |
| C2—C3—C5—N3 | 179.41 (15) | C10—N3—C9—O1 | 4.8 (3) |
| C2—C3—C5—C4 | −1.2 (2) | C5—N3—C9—N2 | 1.58 (17) |
| C9—N3—C5—C3 | 177.86 (16) | C10—N3—C9—N2 | −175.03 (14) |
| C10—N3—C5—C3 | −5.7 (3) | C5—N3—C10—C11 | −45.0 (2) |
| C9—N3—C5—C4 | −1.58 (16) | C9—N3—C10—C11 | 131.00 (17) |
| C10—N3—C5—C4 | 174.83 (15) |
| H··· | ||||
| C8—H8···O1i | 0.95 (1) | 2.53 (2) | 3.392 (3) | 151 (3) |
| C12—H12···N1ii | 0.94 (1) | 2.51 (2) | 3.346 (2) | 149 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C8—H8⋯O1i | 0.95 (1) | 2.53 (2) | 3.392 (3) | 151 (3) |
| C12—H12⋯N1ii | 0.94 (1) | 2.51 (2) | 3.346 (2) | 149 (2) |
Symmetry codes: (i) ; (ii) .