Literature DB >> 21580601

6-Bromo-1,3-di-2-propynyl-1H-imidazo[4,5-b]pyridin-2(3H)-one.

S Dahmani, A Haoudi, F Capet, El Mokhtar Essassi, Seik Weng Ng.   

Abstract

The room-temperature reaction of propargyl bromide and 6-bromo-1,3-dihydro-imidazo[4,5-b]pyridin-2-one in dimethyl-formamide yields the title compound, C(12)H(8)BrN(3)O, which features nitro-gen-bound propynyl substituents. The imidazopyridine fused ring is almost planar (r.m.s. deviation = 0.011 Å); the propynyl chains point in opposite directions relative to the fused ring. One acetyl-enic H atom is hydrogen bonded to the carbonyl O atom of an inversion-related mol-ecule, forming a dimer; adjacent dimers are linked by a second acetyl-ene-pyridine C-H⋯N inter-action, forming a layer motif.

Entities:  

Year:  2010        PMID: 21580601      PMCID: PMC2983980          DOI: 10.1107/S1600536810007701

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of other imidazo[4,5-b]pyridin-2-ones, see: Kourafalos et al. (2002 ▶); Meanwell et al. (1995 ▶).

Experimental

Crystal data

C12H8BrN3O M = 290.12 Monoclinic, a = 9.0725 (3) Å b = 18.6212 (5) Å c = 7.0684 (2) Å β = 102.995 (1)° V = 1163.56 (6) Å3 Z = 4 Mo Kα radiation μ = 3.52 mm−1 T = 293 K 0.35 × 0.30 × 0.15 mm

Data collection

Bruker X8 APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.372, T max = 0.620 27315 measured reflections 3383 independent reflections 2810 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.085 S = 1.03 3383 reflections 162 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.87 e Å−3 Δρmin = −0.80 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810007701/hg2650sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810007701/hg2650Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H8BrN3OF(000) = 576
Mr = 290.12Dx = 1.656 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9924 reflections
a = 9.0725 (3) Åθ = 2.3–31.8°
b = 18.6212 (5) ŵ = 3.52 mm1
c = 7.0684 (2) ÅT = 293 K
β = 102.995 (1)°Prism, yellow
V = 1163.56 (6) Å30.35 × 0.30 × 0.15 mm
Z = 4
Bruker X8 APEXII diffractometer3383 independent reflections
Radiation source: fine-focus sealed tube2810 reflections with I > 2σ(I)
graphiteRint = 0.032
φ and ω scansθmax = 30.0°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −12→12
Tmin = 0.372, Tmax = 0.620k = −26→26
27315 measured reflectionsl = −9→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.085H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0475P)2 + 0.4099P] where P = (Fo2 + 2Fc2)/3
3383 reflections(Δ/σ)max = 0.001
162 parametersΔρmax = 0.87 e Å3
2 restraintsΔρmin = −0.80 e Å3
xyzUiso*/Ueq
Br10.40313 (3)0.071904 (9)0.35455 (3)0.05174 (9)
O10.32318 (15)0.47483 (7)0.3528 (2)0.0435 (3)
N10.12161 (15)0.24467 (8)0.3731 (2)0.0354 (3)
N20.18505 (15)0.37028 (8)0.3651 (2)0.0326 (3)
N30.42693 (14)0.35966 (7)0.35770 (18)0.0289 (3)
C10.1822 (2)0.17839 (9)0.3720 (2)0.0368 (4)
H10.12130.13870.37860.044*
C20.3302 (2)0.16693 (8)0.3614 (2)0.0322 (3)
C30.43018 (17)0.22350 (8)0.3550 (2)0.0289 (3)
H30.53020.21610.34810.035*
C40.21635 (17)0.29782 (8)0.3662 (2)0.0279 (3)
C50.36927 (16)0.29091 (8)0.3596 (2)0.0251 (3)
C60.0418 (2)0.40256 (12)0.3799 (3)0.0457 (4)
H6A0.06210.44710.45220.055*
H6B−0.00930.37050.45240.055*
C7−0.0586 (2)0.41743 (12)0.1911 (3)0.0484 (5)
C8−0.1389 (3)0.43130 (16)0.0410 (4)0.0699 (8)
H8−0.212 (3)0.442 (2)−0.073 (3)0.108 (13)*
C90.31325 (18)0.40998 (9)0.3577 (2)0.0307 (3)
C100.58352 (18)0.38016 (10)0.3664 (3)0.0380 (4)
H10A0.59570.43110.39460.046*
H10B0.60680.37180.24080.046*
C110.68988 (18)0.33965 (10)0.5150 (3)0.0397 (4)
C120.7772 (2)0.30575 (14)0.6294 (4)0.0559 (6)
H120.849 (2)0.2804 (13)0.721 (3)0.070 (8)*
U11U22U33U12U13U23
Br10.07831 (18)0.02651 (10)0.04492 (13)0.00475 (8)0.00231 (10)−0.00343 (6)
O10.0484 (7)0.0281 (6)0.0488 (7)0.0041 (5)−0.0001 (6)0.0039 (5)
N10.0277 (6)0.0436 (8)0.0344 (7)−0.0079 (6)0.0059 (5)−0.0006 (6)
N20.0261 (6)0.0344 (7)0.0357 (7)0.0063 (5)0.0039 (5)0.0004 (5)
N30.0234 (6)0.0261 (6)0.0353 (6)−0.0012 (4)0.0023 (5)0.0030 (5)
C10.0402 (9)0.0356 (8)0.0330 (8)−0.0124 (7)0.0050 (7)−0.0002 (6)
C20.0437 (9)0.0262 (7)0.0246 (7)−0.0018 (6)0.0036 (6)−0.0010 (5)
C30.0291 (7)0.0294 (7)0.0276 (7)0.0028 (5)0.0051 (6)0.0003 (5)
C40.0248 (7)0.0332 (7)0.0240 (6)0.0005 (5)0.0022 (5)−0.0001 (5)
C50.0237 (6)0.0269 (7)0.0236 (6)−0.0015 (5)0.0034 (5)0.0005 (5)
C60.0346 (9)0.0554 (11)0.0481 (10)0.0163 (8)0.0114 (8)−0.0029 (9)
C70.0306 (9)0.0535 (11)0.0610 (12)0.0143 (8)0.0101 (8)0.0079 (9)
C80.0452 (13)0.093 (2)0.0672 (16)0.0256 (12)0.0040 (11)0.0159 (13)
C90.0304 (7)0.0294 (7)0.0286 (7)0.0028 (6)−0.0014 (6)0.0018 (6)
C100.0274 (7)0.0392 (9)0.0457 (9)−0.0064 (6)0.0047 (7)0.0103 (7)
C110.0236 (7)0.0455 (9)0.0482 (10)−0.0043 (6)0.0042 (7)0.0049 (8)
C120.0307 (9)0.0659 (14)0.0661 (14)0.0016 (9)0.0002 (9)0.0171 (11)
Br1—C21.8935 (16)C3—C51.375 (2)
O1—C91.212 (2)C3—H30.9300
N1—C41.319 (2)C4—C51.405 (2)
N1—C11.352 (2)C6—C71.463 (3)
N2—C41.378 (2)C6—H6A0.9700
N2—C91.389 (2)C6—H6B0.9700
N2—C61.457 (2)C7—C81.173 (3)
N3—C51.3842 (19)C8—H80.948 (10)
N3—C91.394 (2)C10—C111.466 (2)
N3—C101.459 (2)C10—H10A0.9700
C1—C21.379 (3)C10—H10B0.9700
C1—H10.9300C11—C121.179 (3)
C2—C31.397 (2)C12—H120.939 (10)
C4—N1—C1114.56 (14)N3—C5—C4107.09 (13)
C4—N2—C9110.37 (13)N2—C6—C7113.27 (16)
C4—N2—C6126.11 (16)N2—C6—H6A108.9
C9—N2—C6123.44 (15)C7—C6—H6A108.9
C5—N3—C9109.91 (13)N2—C6—H6B108.9
C5—N3—C10127.46 (14)C7—C6—H6B108.9
C9—N3—C10122.53 (14)H6A—C6—H6B107.7
N1—C1—C2122.96 (15)C8—C7—C6178.2 (3)
N1—C1—H1118.5C7—C8—H8174 (2)
C2—C1—H1118.5O1—C9—N2126.84 (15)
C1—C2—C3122.16 (15)O1—C9—N3127.61 (16)
C1—C2—Br1119.74 (12)N2—C9—N3105.55 (13)
C3—C2—Br1118.10 (13)N3—C10—C11111.93 (14)
C5—C3—C2114.86 (14)N3—C10—H10A109.2
C5—C3—H3122.6C11—C10—H10A109.2
C2—C3—H3122.6N3—C10—H10B109.2
N1—C4—N2126.85 (15)C11—C10—H10B109.2
N1—C4—C5126.10 (15)H10A—C10—H10B107.9
N2—C4—C5107.05 (13)C12—C11—C10177.6 (2)
C3—C5—N3133.58 (14)C11—C12—H12177.7 (17)
C3—C5—C4119.33 (14)
C4—N1—C1—C2−1.0 (2)N1—C4—C5—C31.7 (2)
N1—C1—C2—C31.4 (3)N2—C4—C5—C3−178.61 (13)
N1—C1—C2—Br1−178.53 (12)N1—C4—C5—N3−178.81 (14)
C1—C2—C3—C5−0.2 (2)N2—C4—C5—N30.92 (16)
Br1—C2—C3—C5179.73 (10)C4—N2—C6—C7−93.3 (2)
C1—N1—C4—N2179.82 (15)C9—N2—C6—C790.2 (2)
C1—N1—C4—C5−0.5 (2)C4—N2—C9—O1179.15 (16)
C9—N2—C4—N1179.78 (15)C6—N2—C9—O1−3.9 (3)
C6—N2—C4—N12.9 (3)C4—N2—C9—N3−0.99 (17)
C9—N2—C4—C50.05 (17)C6—N2—C9—N3175.99 (15)
C6—N2—C4—C5−176.84 (15)C5—N3—C9—O1−178.56 (16)
C2—C3—C5—N3179.41 (15)C10—N3—C9—O14.8 (3)
C2—C3—C5—C4−1.2 (2)C5—N3—C9—N21.58 (17)
C9—N3—C5—C3177.86 (16)C10—N3—C9—N2−175.03 (14)
C10—N3—C5—C3−5.7 (3)C5—N3—C10—C11−45.0 (2)
C9—N3—C5—C4−1.58 (16)C9—N3—C10—C11131.00 (17)
C10—N3—C5—C4174.83 (15)
D—H···AD—HH···AD···AD—H···A
C8—H8···O1i0.95 (1)2.53 (2)3.392 (3)151 (3)
C12—H12···N1ii0.94 (1)2.51 (2)3.346 (2)149 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C8—H8⋯O1i0.95 (1)2.53 (2)3.392 (3)151 (3)
C12—H12⋯N1ii0.94 (1)2.51 (2)3.346 (2)149 (2)

Symmetry codes: (i) ; (ii) .

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Authors:  George M Sheldrick
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1.  1,3-Dibenzyl-6-bromo-1H-imidazo[4,5-b]pyridin-2(3H)-one.

Authors:  S Dahmani; Y Kandri Rodi; F Capet; El Mokhtar Essassi; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-06
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