Literature DB >> 21580600

6-Bromo-1-(1,2-propadien-yl)-3-(2-propyn-yl)-1H-imidazo[4,5-b]pyridin-2(3H)-one.

S Dahmani, A Haoudi, F Capet, El Mokhtar Essassi, Seik Weng Ng.   

Abstract

The reaction of propargyl bromide and 6-bromo-1,3-dihydro-imidazo[4,5-b]pyridin-2-one in refluxing dimethyl-formamide yields the title compound, C(12)H(8)BrN(3)O, which features nitro-gen-bound propadienyl and propynyl substituents. The imidazolopyridine fused ring is planar (r.m.s. deviation = 0.012 Å); the propadienyl chain is coplanar with the fused ring as it is conjugated with it, whereas the propynyl chain is not as the nitro-gen-bound C atom is a methyl-ene linkage. The acetyl-enic H atom is hydrogen bonded to the carbonyl O atom of an adjacent mol-ecule, forming a helical chain runnning along the b axis.

Entities:  

Year:  2010        PMID: 21580600      PMCID: PMC2983773          DOI: 10.1107/S1600536810007695

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of other imidazo[4,5-b]pyridin-2-ones, see: Kourafalos et al. (2002 ▶); Meanwell et al. (1995 ▶).

Experimental

Crystal data

C12H8BrN3O M = 290.12 Monoclinic, a = 9.6369 (4) Å b = 9.3086 (4) Å c = 13.5481 (5) Å β = 99.123 (2)° V = 1199.97 (8) Å3 Z = 4 Mo Kα radiation μ = 3.41 mm−1 T = 293 K 0.55 × 0.35 × 0.30 mm

Data collection

Bruker X8 APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.256, T max = 0.428 51411 measured reflections 3393 independent reflections 2577 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.087 S = 1.02 3393 reflections 166 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.49 e Å−3 Δρmin = −0.63 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810007695/hg2649sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810007695/hg2649Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H8BrN3OF(000) = 576
Mr = 290.12Dx = 1.606 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 9975 reflections
a = 9.6369 (4) Åθ = 2.4–25.6°
b = 9.3086 (4) ŵ = 3.41 mm1
c = 13.5481 (5) ÅT = 293 K
β = 99.123 (2)°Irregular, colorless
V = 1199.97 (8) Å30.55 × 0.35 × 0.30 mm
Z = 4
Bruker X8 APEXII diffractometer3393 independent reflections
Radiation source: fine-focus sealed tube2577 reflections with I > 2σ(I)
graphiteRint = 0.040
φ and ω scansθmax = 29.7°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −13→13
Tmin = 0.256, Tmax = 0.428k = −12→12
51411 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.087H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0413P)2 + 0.4635P] where P = (Fo2 + 2Fc2)/3
3393 reflections(Δ/σ)max = 0.001
166 parametersΔρmax = 0.49 e Å3
3 restraintsΔρmin = −0.63 e Å3
xyzUiso*/Ueq
Br10.40648 (3)0.39876 (3)0.231050 (17)0.06785 (11)
O10.49655 (17)0.95432 (17)0.64205 (11)0.0577 (4)
N10.21863 (16)0.64109 (19)0.42594 (13)0.0453 (4)
N20.54742 (15)0.78896 (16)0.52363 (11)0.0395 (3)
N30.32605 (16)0.81244 (17)0.54674 (11)0.0417 (3)
C10.2477 (2)0.5495 (2)0.35479 (15)0.0490 (4)
H10.17440.49720.31880.059*
C20.3815 (2)0.53039 (19)0.33326 (13)0.0435 (4)
C30.4981 (2)0.60309 (19)0.38454 (13)0.0399 (4)
H30.58870.58950.37080.048*
C40.46792 (17)0.69616 (18)0.45684 (12)0.0346 (3)
C50.32815 (18)0.71031 (18)0.47294 (12)0.0365 (3)
C60.6938 (2)0.8150 (2)0.53701 (16)0.0503 (5)
H60.73020.88280.58450.060*
C70.7806 (2)0.7510 (2)0.48776 (17)0.0529 (5)
C80.8709 (3)0.6872 (4)0.4413 (2)0.0750 (8)
H810.916 (3)0.602 (2)0.467 (3)0.106 (12)*
H820.890 (3)0.722 (3)0.3788 (13)0.089 (10)*
C90.4605 (2)0.8628 (2)0.57909 (14)0.0416 (4)
C100.2020 (2)0.8584 (2)0.58740 (16)0.0509 (5)
H10A0.12520.87360.53280.061*
H10B0.22180.94940.62170.061*
C110.1586 (2)0.7538 (2)0.65707 (15)0.0521 (5)
C120.1208 (3)0.6715 (3)0.71186 (19)0.0694 (7)
H120.093 (3)0.601 (2)0.7550 (18)0.088 (11)*
U11U22U33U12U13U23
Br10.0918 (2)0.05653 (15)0.05116 (14)0.01376 (12)−0.00107 (12)−0.01710 (9)
O10.0645 (9)0.0499 (8)0.0563 (9)0.0031 (7)0.0024 (7)−0.0158 (7)
N10.0357 (8)0.0481 (9)0.0513 (9)−0.0027 (7)0.0046 (7)0.0022 (7)
N20.0367 (7)0.0396 (8)0.0417 (7)−0.0023 (6)0.0050 (6)−0.0021 (6)
N30.0417 (8)0.0425 (8)0.0431 (8)0.0011 (6)0.0133 (6)−0.0014 (6)
C10.0469 (10)0.0461 (10)0.0504 (10)−0.0050 (8)−0.0035 (8)−0.0017 (8)
C20.0555 (11)0.0369 (9)0.0362 (8)0.0034 (8)0.0016 (7)−0.0014 (7)
C30.0408 (9)0.0411 (9)0.0385 (8)0.0031 (7)0.0085 (7)0.0024 (7)
C40.0351 (8)0.0350 (8)0.0334 (7)−0.0008 (6)0.0051 (6)0.0060 (6)
C50.0386 (8)0.0350 (8)0.0364 (8)0.0006 (7)0.0079 (6)0.0057 (6)
C60.0381 (9)0.0515 (11)0.0592 (12)−0.0078 (8)0.0015 (8)−0.0032 (9)
C70.0343 (9)0.0597 (12)0.0628 (12)−0.0064 (9)0.0017 (9)0.0098 (10)
C80.0396 (11)0.101 (2)0.0867 (19)0.0039 (13)0.0176 (12)0.0060 (17)
C90.0474 (10)0.0370 (9)0.0402 (9)0.0029 (7)0.0061 (7)0.0014 (7)
C100.0512 (11)0.0491 (11)0.0570 (12)0.0097 (9)0.0224 (9)0.0029 (9)
C110.0510 (11)0.0614 (12)0.0461 (10)0.0007 (9)0.0149 (8)−0.0033 (9)
C120.0748 (16)0.0808 (18)0.0555 (13)−0.0120 (14)0.0197 (12)0.0087 (12)
Br1—C21.8928 (18)C3—C41.373 (2)
O1—C91.216 (2)C3—H30.9300
N1—C51.312 (2)C4—C51.404 (2)
N1—C11.349 (3)C6—C71.295 (3)
N2—C41.390 (2)C6—H60.9300
N2—C91.393 (2)C7—C81.296 (4)
N2—C61.414 (2)C8—H810.95 (1)
N3—C51.382 (2)C8—H820.95 (1)
N3—C91.382 (2)C10—C111.463 (3)
N3—C101.458 (2)C10—H10A0.9700
C1—C21.378 (3)C10—H10B0.9700
C1—H10.9300C11—C121.164 (3)
C2—C31.398 (3)C12—H120.94 (1)
C5—N1—C1114.50 (16)N1—C5—C4126.59 (17)
C4—N2—C9109.96 (14)N3—C5—C4107.53 (15)
C4—N2—C6128.72 (16)C7—C6—N2124.62 (19)
C9—N2—C6121.29 (16)C7—C6—H6117.7
C5—N3—C9110.03 (15)N2—C6—H6117.7
C5—N3—C10125.63 (16)C8—C7—C6178.0 (3)
C9—N3—C10124.33 (16)C7—C8—H81121 (2)
N1—C1—C2122.72 (18)C7—C8—H82120.7 (19)
N1—C1—H1118.6H81—C8—H82118 (3)
C2—C1—H1118.6O1—C9—N3127.55 (18)
C1—C2—C3122.49 (17)O1—C9—N2126.48 (18)
C1—C2—Br1118.07 (14)N3—C9—N2105.97 (15)
C3—C2—Br1119.43 (14)N3—C10—C11112.56 (17)
C4—C3—C2114.56 (16)N3—C10—H10A109.1
C4—C3—H3122.7C11—C10—H10A109.1
C2—C3—H3122.7N3—C10—H10B109.1
C3—C4—N2134.39 (16)C11—C10—H10B109.1
C3—C4—C5119.12 (16)H10A—C10—H10B107.8
N2—C4—C5106.49 (15)C12—C11—C10178.4 (3)
N1—C5—N3125.87 (16)C11—C12—H12177.2 (19)
C5—N1—C1—C20.0 (3)C3—C4—C5—N10.9 (3)
N1—C1—C2—C30.9 (3)N2—C4—C5—N1−179.58 (17)
N1—C1—C2—Br1−179.76 (15)C3—C4—C5—N3−178.29 (15)
C1—C2—C3—C4−0.8 (3)N2—C4—C5—N31.26 (18)
Br1—C2—C3—C4179.81 (12)C4—N2—C6—C7−1.4 (3)
C2—C3—C4—N2−179.36 (18)C9—N2—C6—C7−179.6 (2)
C2—C3—C4—C50.0 (2)C5—N3—C9—O1178.90 (19)
C9—N2—C4—C3178.04 (18)C10—N3—C9—O1−2.7 (3)
C6—N2—C4—C3−0.3 (3)C5—N3—C9—N2−0.2 (2)
C9—N2—C4—C5−1.41 (19)C10—N3—C9—N2178.17 (16)
C6—N2—C4—C5−179.75 (17)C4—N2—C9—O1−178.10 (19)
C1—N1—C5—N3178.16 (17)C6—N2—C9—O10.4 (3)
C1—N1—C5—C4−0.9 (3)C4—N2—C9—N31.00 (19)
C9—N3—C5—N1−179.84 (17)C6—N2—C9—N3179.49 (16)
C10—N3—C5—N11.8 (3)C5—N3—C10—C1176.4 (2)
C9—N3—C5—C4−0.67 (19)C9—N3—C10—C11−101.7 (2)
C10—N3—C5—C4−179.00 (16)
D—H···AD—HH···AD···AD—H···A
C12—H12···O1i0.94 (1)2.22 (1)3.161 (3)173 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C12—H12⋯O1i0.94 (1)2.22 (1)3.161 (3)173 (2)

Symmetry code: (i) .

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Authors:  George M Sheldrick
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1.  1,3-Dibenzyl-6-bromo-1H-imidazo[4,5-b]pyridin-2(3H)-one.

Authors:  S Dahmani; Y Kandri Rodi; F Capet; El Mokhtar Essassi; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-06
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