| Literature DB >> 21580587 |
Liang Xu1, Li-Yan Gu, Dan-Yu Zhao, Bing Wang, Ting-Guo Kang.
Abstract
The two independent mol-ecules of the title compound, C(7)H(5)ClN(4), both lie on a twofold rotation axis that passes through the centroids of the five- and six-membered rings and the attached Cl C atom. One molecule is nearly planar [dihedral angle between rings = 0.22 (6)°], whereas the other is significantly twisted [dihedral angle = 17.38 (6)°]. In the crystal, adjacent mol-ecules are linked by N-H⋯N hydrogen bonds into a chain structure.Entities:
Year: 2010 PMID: 21580587 PMCID: PMC2983818 DOI: 10.1107/S1600536810003788
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C7H5ClN4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yc | Cell parameters from 5352 reflections |
| θ = 3.1–27.5° | |
| µ = 0.45 mm−1 | |
| β = 107.91 (3)° | Block, colorless |
| 0.21 × 0.14 × 0.11 mm | |
| Rigaku R-AXIS RAPID diffractometer | 1720 independent reflections |
| Radiation source: fine-focus sealed tube | 1194 reflections with |
| graphite | |
| ω scan | θmax = 27.5°, θmin = 3.4° |
| Absorption correction: multi-scan ( | |
| 7237 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1720 reflections | (Δ/σ)max < 0.001 |
| 118 parameters | Δρmax = 0.77 e Å−3 |
| 0 restraints | Δρmin = −0.24 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| C1 | 0.0000 | 0.7724 (3) | 0.2500 | 0.0340 (7) | |
| C2 | 0.1238 (2) | 0.7123 (2) | 0.3612 (3) | 0.0375 (5) | |
| H1 | 0.2067 | 0.7530 | 0.4358 | 0.045* | |
| C3 | 0.1235 (2) | 0.59197 (19) | 0.3606 (3) | 0.0331 (5) | |
| H2 | 0.2068 | 0.5518 | 0.4350 | 0.040* | |
| C4 | 0.0000 | 0.5293 (3) | 0.2500 | 0.0282 (6) | |
| C5 | 0.0000 | 0.4029 (3) | 0.2500 | 0.0288 (6) | |
| C6 | 0.5000 | −0.0727 (3) | 0.7500 | 0.0296 (6) | |
| C7 | 0.3680 (2) | −0.0135 (2) | 0.6704 (3) | 0.0389 (5) | |
| H4 | 0.2797 | −0.0544 | 0.6188 | 0.047* | |
| C8 | 0.3688 (2) | 0.1065 (2) | 0.6683 (3) | 0.0354 (5) | |
| H5 | 0.2809 | 0.1471 | 0.6119 | 0.042* | |
| C9 | 0.5000 | 0.1681 (2) | 0.7500 | 0.0258 (6) | |
| C10 | 0.5000 | 0.2975 (3) | 0.7500 | 0.0267 (6) | |
| Cl1 | 0.0000 | 0.92391 (7) | 0.2500 | 0.0492 (3) | |
| Cl2 | 0.5000 | −0.22534 (7) | 0.7500 | 0.0464 (3) | |
| N1 | 0.1109 (2) | 0.33285 (16) | 0.3488 (2) | 0.0349 (4) | |
| H3 | 0.1934 | 0.3493 | 0.4318 | 0.050 (15)* | 0.50 |
| N2 | 0.0660 (2) | 0.22079 (17) | 0.3089 (3) | 0.0418 (5) | |
| N3 | 0.3941 (2) | 0.36603 (16) | 0.6406 (3) | 0.0349 (4) | |
| H6 | 0.322 (5) | 0.352 (4) | 0.545 (6) | 0.016 (9)* | 0.50 |
| N4 | 0.4364 (2) | 0.47685 (17) | 0.6842 (3) | 0.0398 (5) |
| C1 | 0.0332 (14) | 0.0274 (17) | 0.0377 (15) | 0.000 | 0.0056 (12) | 0.000 |
| C2 | 0.0313 (10) | 0.0320 (12) | 0.0424 (11) | −0.0035 (8) | 0.0011 (9) | −0.0024 (9) |
| C3 | 0.0270 (9) | 0.0298 (12) | 0.0349 (10) | 0.0000 (8) | −0.0016 (8) | 0.0017 (8) |
| C4 | 0.0267 (13) | 0.0285 (17) | 0.0270 (13) | 0.000 | 0.0046 (11) | 0.000 |
| C5 | 0.0305 (13) | 0.0261 (15) | 0.0266 (12) | 0.000 | 0.0038 (11) | 0.000 |
| C6 | 0.0365 (14) | 0.0215 (15) | 0.0272 (13) | 0.000 | 0.0047 (12) | 0.000 |
| C7 | 0.0324 (11) | 0.0310 (12) | 0.0456 (12) | −0.0054 (8) | 0.0006 (10) | −0.0066 (9) |
| C8 | 0.0242 (9) | 0.0328 (12) | 0.0408 (11) | 0.0009 (8) | −0.0021 (8) | −0.0002 (9) |
| C9 | 0.0292 (13) | 0.0219 (15) | 0.0238 (12) | 0.000 | 0.0044 (11) | 0.000 |
| C10 | 0.0248 (12) | 0.0282 (16) | 0.0244 (12) | 0.000 | 0.0037 (11) | 0.000 |
| Cl1 | 0.0465 (5) | 0.0241 (5) | 0.0709 (6) | 0.000 | 0.0090 (4) | 0.000 |
| Cl2 | 0.0591 (5) | 0.0225 (5) | 0.0503 (5) | 0.000 | 0.0061 (4) | 0.000 |
| N1 | 0.0332 (8) | 0.0275 (10) | 0.0356 (9) | 0.0027 (7) | −0.0019 (8) | 0.0001 (7) |
| N2 | 0.0437 (10) | 0.0245 (10) | 0.0456 (10) | 0.0031 (8) | −0.0036 (8) | 0.0027 (8) |
| N3 | 0.0329 (9) | 0.0257 (10) | 0.0374 (9) | 0.0008 (7) | −0.0018 (8) | 0.0000 (7) |
| N4 | 0.0381 (9) | 0.0259 (10) | 0.0450 (10) | 0.0016 (8) | −0.0027 (8) | 0.0002 (8) |
| C1—C2 | 1.385 (3) | C7—C8 | 1.373 (3) |
| C1—C2i | 1.385 (3) | C7—H4 | 0.9300 |
| C1—Cl1 | 1.732 (3) | C8—C9 | 1.392 (2) |
| C2—C3 | 1.376 (3) | C8—H5 | 0.9300 |
| C2—H1 | 0.9300 | C9—C8ii | 1.392 (2) |
| C3—C4 | 1.397 (3) | C9—C10 | 1.480 (4) |
| C3—H2 | 0.9300 | C10—N3ii | 1.328 (3) |
| C4—C3i | 1.397 (3) | C10—N3 | 1.328 (3) |
| C4—C5 | 1.446 (4) | N1—N2 | 1.353 (3) |
| C5—N1i | 1.340 (3) | N1—H3 | 0.8492 |
| C5—N1 | 1.340 (3) | N2—N2i | 1.280 (4) |
| C6—C7ii | 1.382 (3) | N3—N4 | 1.338 (3) |
| C6—C7 | 1.382 (3) | N3—H6 | 0.83 (4) |
| C6—Cl2 | 1.746 (3) | N4—N4ii | 1.288 (3) |
| C2—C1—C2i | 120.5 (3) | C8—C7—H4 | 120.4 |
| C2—C1—Cl1 | 119.77 (15) | C6—C7—H4 | 120.4 |
| C2i—C1—Cl1 | 119.77 (15) | C7—C8—C9 | 120.55 (19) |
| C3—C2—C1 | 119.6 (2) | C7—C8—H5 | 119.7 |
| C3—C2—H1 | 120.2 | C9—C8—H5 | 119.7 |
| C1—C2—H1 | 120.2 | C8—C9—C8ii | 119.2 (3) |
| C2—C3—C4 | 121.05 (19) | C8—C9—C10 | 120.38 (13) |
| C2—C3—H2 | 119.5 | C8ii—C9—C10 | 120.38 (14) |
| C4—C3—H2 | 119.5 | N3ii—C10—N3 | 107.6 (3) |
| C3—C4—C3i | 118.2 (3) | N3ii—C10—C9 | 126.18 (13) |
| C3—C4—C5 | 120.88 (14) | N3—C10—C9 | 126.18 (13) |
| C3i—C4—C5 | 120.88 (14) | C5—N1—N2 | 107.97 (18) |
| N1i—C5—N1 | 106.6 (3) | C5—N1—H3 | 130.3 |
| N1i—C5—C4 | 126.70 (14) | N2—N1—H3 | 121.5 |
| N1—C5—C4 | 126.70 (14) | N2i—N2—N1 | 108.73 (11) |
| C7ii—C6—C7 | 121.3 (3) | C10—N3—N4 | 107.51 (18) |
| C7ii—C6—Cl2 | 119.34 (14) | C10—N3—H6 | 131 (3) |
| C7—C6—Cl2 | 119.34 (14) | N4—N3—H6 | 120 (3) |
| C8—C7—C6 | 119.1 (2) | N4ii—N4—N3 | 108.67 (11) |
| H··· | ||||
| N1—H3···N3 | 0.85 (1) | 2.05 (1) | 2.889 (2) | 172 (1) |
| N3—H6···N1 | 0.83 (3) | 2.08 (4) | 2.889 (2) | 165.7 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H3⋯N3 | 0.85 (1) | 2.05 (1) | 2.889 (2) | 172 (1) |
| N3—H6⋯N1 | 0.83 (3) | 2.08 (4) | 2.889 (2) | 165.7 (2) |