Literature DB >> 21580560

Penta-carbon-yl{3-[(2S)-1-methyl-pyrrolidin-2-yl]pyridine}tungsten(0).

Martin O Onani, Roger A Lalancette, Naftali T Muriithi, Eunice A Nyawade, Boitumelo V Kgarebe.   

Abstract

The title compound, [W(C(10)H(14)N(2))(CO)(5)], contains five carbonyl ligands and a nicotine ligand in an octa-hedral arrangement around the tungsten atom. The metal atom shows cis angles in the range 87.30 (16)-94.2 (2)°, and trans angles between 175.2 (2) and 178.1 (4)°. The W-CO bond trans to the pyridine N atom [1.987 (6) Å] is noticeably shorter than the others, which range between 2.036 (3) and 2.064 (3) Å, possibly due to the well-known trans effect. The distance between the W atom and the pyridine N atom is 2.278 (4) Å.

Entities:  

Year:  2010        PMID: 21580560      PMCID: PMC2983989          DOI: 10.1107/S1600536810010974

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Attempts to understand and mimic the nature of nitro­gen fixation have led to studies on the responsible enzyme, nitro­genase (Jennings, 1991 ▶; Schrock, 2006 ▶). As part of this work, we have investigated the reactions of the precursor tungsten halogenidocarbonyl derivative, [W(CO)4 X 2]2, with nitro­gen bases. For possible reaction mechanisms, see: Abel et al. (1963 ▶); Baker (1998 ▶); Heyns & Buchholtz (1976 ▶); Tripathi & Srivasatva (1970 ▶). For the preparation of tungsten dichlorido­tetracarbonyl [W(CO)4Cl2], see: Colton & Tomkins (1966 ▶).

Experimental

Crystal data

[W(C10H14N2)(CO)5] M = 486.13 Monoclinic, a = 6.6303 (1) Å b = 10.6720 (2) Å c = 11.6748 (2) Å β = 96.636 (1)° V = 820.56 (2) Å3 Z = 2 Cu Kα radiation μ = 13.29 mm−1 T = 100 K 0.28 × 0.25 × 0.19 mm

Data collection

Bruker SMART CCD APEXII area-detector diffractometer Absorption correction: numerical (SADABS; Sheldrick, 2008a ▶) T min = 0.119, T max = 0.185 6704 measured reflections 2676 independent reflections 2673 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.014 wR(F 2) = 0.033 S = 1.13 2676 reflections 210 parameters 1 restraint H-atom parameters constrained Δρmax = 0.44 e Å−3 Δρmin = −0.53 e Å−3 Absolute structure: Flack (1983 ▶), 1225 Friedel pairs Flack parameter: 0.041 (9) Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008b ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810010974/ez2203sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810010974/ez2203Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[W(C10H14N2)(CO)5]F(000) = 464
Mr = 486.13Dx = 1.968 Mg m3
Monoclinic, P21Cu Kα radiation, λ = 1.54178 Å
Hall symbol: P 2ybCell parameters from 6772 reflections
a = 6.6303 (1) Åθ = 3.8–66.8°
b = 10.6720 (2) ŵ = 13.29 mm1
c = 11.6748 (2) ÅT = 100 K
β = 96.636 (1)°Plate, yellow
V = 820.56 (2) Å30.28 × 0.25 × 0.19 mm
Z = 2
Bruker SMART CCD APEXII area-detector diffractometer2676 independent reflections
Radiation source: fine-focus sealed tube2673 reflections with I > 2σ(I)
graphiteRint = 0.020
φ and ω scansθmax = 66.8°, θmin = 3.8°
Absorption correction: numerical (SADABS; Sheldrick, 2008a)h = −7→7
Tmin = 0.119, Tmax = 0.185k = −12→12
6704 measured reflectionsl = −13→11
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.014w = 1/[σ2(Fo2) + (0.0071P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.033(Δ/σ)max < 0.001
S = 1.13Δρmax = 0.44 e Å3
2676 reflectionsΔρmin = −0.53 e Å3
210 parametersExtinction correction: SHELXTL (Sheldrick, 2008b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
1 restraintExtinction coefficient: 0.00053 (7)
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983), 1225 Friedel pairs
Secondary atom site location: difference Fourier mapFlack parameter: 0.041 (9)
Experimental. 'crystal mounted on a Cryoloop using Paratone-N'
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
W10.975072 (14)0.99294 (4)0.798344 (8)0.01869 (6)
C11.1233 (8)1.1176 (5)0.9028 (5)0.0212 (12)
O11.2053 (6)1.1868 (3)0.9687 (3)0.0307 (8)
N10.7925 (6)0.8443 (4)0.6915 (4)0.0218 (9)
C20.8653 (6)1.1332 (4)0.6881 (4)0.0206 (10)
O20.8203 (4)1.2112 (3)0.6253 (2)0.0327 (6)
N20.3021 (3)0.5061 (4)0.6952 (2)0.0230 (6)
C31.2185 (4)0.9810 (7)0.7074 (2)0.0238 (9)
O31.3582 (3)0.9783 (5)0.6594 (2)0.0384 (8)
C41.1080 (9)0.8553 (5)0.9047 (6)0.0233 (12)
O41.1972 (6)0.7822 (3)0.9596 (3)0.0337 (8)
C50.7301 (4)1.0112 (5)0.8913 (2)0.0204 (11)
O50.5952 (4)1.0199 (2)0.9427 (2)0.0327 (8)
C60.7783 (5)0.8398 (3)0.5751 (3)0.0244 (7)
H60.84630.90170.53550.029*
C70.6690 (5)0.7487 (3)0.5122 (3)0.0289 (7)
H70.66110.74870.43040.035*
C80.5703 (5)0.6569 (3)0.5682 (3)0.0245 (7)
H80.49630.59240.52580.029*
C90.5815 (5)0.6609 (3)0.6876 (3)0.0204 (6)
C100.6930 (4)0.7558 (3)0.7446 (3)0.0190 (6)
H100.70010.75870.82630.023*
C110.4868 (5)0.5628 (3)0.7575 (3)0.0204 (6)
H110.45300.60070.83120.025*
C120.6199 (5)0.4479 (3)0.7839 (3)0.0285 (8)
H12A0.72030.46260.85220.034*
H12B0.69310.42610.71740.034*
C130.4704 (5)0.3435 (4)0.8078 (3)0.0283 (8)
H13A0.49550.26660.76420.034*
H13B0.48210.32320.89110.034*
C140.2606 (5)0.3988 (3)0.7666 (3)0.0246 (7)
H14A0.17460.33650.72100.030*
H14B0.19080.42580.83290.030*
C150.1310 (5)0.5916 (4)0.6783 (3)0.0321 (8)
H15A0.01560.54940.63430.048*
H15B0.16870.66550.63590.048*
H15C0.09300.61740.75350.048*
U11U22U33U12U13U23
W10.01884 (8)0.01807 (8)0.01892 (8)−0.00160 (9)0.00110 (4)−0.00046 (9)
C10.017 (2)0.024 (3)0.022 (3)0.0024 (17)0.0021 (17)0.0015 (18)
O10.0287 (18)0.0293 (18)0.033 (2)−0.0064 (14)0.0007 (14)−0.0016 (14)
N10.021 (2)0.0222 (18)0.0211 (18)0.0006 (15)−0.0020 (14)−0.0023 (12)
C20.021 (2)0.0141 (18)0.025 (2)0.0005 (17)−0.0033 (17)0.0001 (13)
O20.0357 (14)0.0301 (15)0.0304 (15)0.0040 (12)−0.0037 (11)0.0013 (12)
N20.0172 (10)0.0248 (18)0.0262 (12)−0.0042 (15)−0.0002 (8)0.0002 (15)
C30.0216 (12)0.028 (3)0.0223 (14)0.0030 (19)0.0068 (10)0.0013 (18)
O30.0368 (12)0.042 (2)0.0386 (13)0.0094 (16)0.0119 (9)0.0142 (15)
C40.024 (2)0.018 (2)0.026 (3)−0.0011 (18)−0.0001 (18)0.0026 (17)
O40.042 (2)0.0292 (17)0.0269 (19)−0.0006 (15)−0.0089 (14)0.0064 (14)
C50.0202 (12)0.022 (3)0.0200 (14)−0.0013 (14)0.0070 (10)−0.0048 (14)
O50.0327 (12)0.031 (3)0.0349 (14)−0.0026 (10)0.0071 (9)−0.0025 (9)
C60.0282 (17)0.0266 (19)0.0185 (19)−0.0014 (14)0.0029 (13)0.0036 (14)
C70.0345 (19)0.035 (2)0.0170 (18)−0.0022 (15)0.0021 (13)−0.0001 (13)
C80.0281 (17)0.0268 (18)0.0175 (18)−0.0031 (14)−0.0016 (12)−0.0027 (12)
C90.0167 (14)0.0233 (17)0.0209 (18)0.0029 (12)0.0005 (11)−0.0001 (12)
C100.0199 (15)0.0220 (17)0.0150 (16)0.0017 (12)0.0019 (11)−0.0005 (11)
C110.0196 (16)0.0228 (18)0.0190 (18)−0.0019 (14)0.0025 (11)−0.0026 (14)
C120.0234 (17)0.0250 (18)0.037 (2)−0.0056 (13)0.0013 (14)0.0076 (12)
C130.0271 (19)0.027 (2)0.030 (2)−0.0056 (13)0.0005 (14)0.0053 (13)
C140.0224 (16)0.0218 (17)0.0299 (19)−0.0067 (13)0.0039 (13)−0.0018 (13)
C150.0243 (17)0.0310 (19)0.040 (2)0.0035 (14)0.0013 (14)0.0027 (15)
W1—C11.987 (6)C7—H70.9500
W1—C32.035 (3)C8—C91.388 (5)
W1—C22.052 (5)C8—H80.9500
W1—C42.055 (6)C9—C101.379 (5)
W1—C52.064 (3)C9—C111.507 (5)
W1—N12.278 (4)C10—H100.9500
C1—O11.156 (7)C11—C121.522 (4)
N1—C101.344 (5)C11—H111.0000
N1—C61.352 (6)C12—C131.539 (5)
C2—O21.126 (6)C12—H12A0.9900
N2—C151.451 (5)C12—H12B0.9900
N2—C141.460 (5)C13—C141.536 (4)
N2—C111.480 (4)C13—H13A0.9900
C3—O31.138 (4)C13—H13B0.9900
C4—O41.132 (7)C14—H14A0.9900
C5—O51.138 (4)C14—H14B0.9900
C6—C71.374 (5)C15—H15A0.9800
C6—H60.9500C15—H15B0.9800
C7—C81.384 (5)C15—H15C0.9800
C1—W1—C389.8 (2)C10—C9—C11118.9 (3)
C1—W1—C290.6 (3)C8—C9—C11123.0 (3)
C3—W1—C287.9 (2)N1—C10—C9124.0 (3)
C1—W1—C487.75 (12)N1—C10—H10118.0
C3—W1—C487.7 (2)C9—C10—H10118.0
C2—W1—C4175.3 (2)N2—C11—C9113.0 (3)
C1—W1—C588.7 (2)N2—C11—C12101.4 (3)
C3—W1—C5178.1 (3)C9—C11—C12113.7 (2)
C2—W1—C590.97 (18)N2—C11—H11109.5
C4—W1—C593.4 (2)C9—C11—H11109.5
C1—W1—N1175.2 (2)C12—C11—H11109.5
C3—W1—N194.2 (2)C11—C12—C13104.5 (3)
C2—W1—N192.12 (11)C11—C12—H12A110.9
C4—W1—N189.8 (3)C13—C12—H12A110.9
C5—W1—N187.30 (16)C11—C12—H12B110.9
O1—C1—W1176.2 (5)C13—C12—H12B110.9
C10—N1—C6117.2 (4)H12A—C12—H12B108.9
C10—N1—W1119.7 (3)C14—C13—C12104.1 (3)
C6—N1—W1123.1 (3)C14—C13—H13A110.9
O2—C2—W1174.5 (4)C12—C13—H13A110.9
C15—N2—C14112.0 (2)C14—C13—H13B110.9
C15—N2—C11113.5 (3)C12—C13—H13B110.9
C14—N2—C11103.9 (3)H13A—C13—H13B109.0
O3—C3—W1177.1 (6)N2—C14—C13104.9 (3)
O4—C4—W1173.8 (5)N2—C14—H14A110.8
O5—C5—W1179.3 (5)C13—C14—H14A110.8
N1—C6—C7122.3 (3)N2—C14—H14B110.8
N1—C6—H6118.9C13—C14—H14B110.8
C7—C6—H6118.9H14A—C14—H14B108.8
C6—C7—C8119.8 (3)N2—C15—H15A109.5
C6—C7—H7120.1N2—C15—H15B109.5
C8—C7—H7120.1H15A—C15—H15B109.5
C7—C8—C9118.7 (3)N2—C15—H15C109.5
C7—C8—H8120.7H15A—C15—H15C109.5
C9—C8—H8120.7H15B—C15—H15C109.5
C10—C9—C8118.1 (3)
C3—W1—C1—O1−139 (7)C1—W1—C5—O5−122 (22)
C2—W1—C1—O1133 (7)C3—W1—C5—O5−159 (22)
C4—W1—C1—O1−51 (7)C2—W1—C5—O5147 (22)
C5—W1—C1—O142 (7)C4—W1—C5—O5−35 (22)
N1—W1—C1—O18(9)N1—W1—C5—O555 (22)
C1—W1—N1—C10−11 (3)C10—N1—C6—C7−0.5 (6)
C3—W1—N1—C10135.7 (3)W1—N1—C6—C7179.4 (3)
C2—W1—N1—C10−136.2 (3)N1—C6—C7—C8−0.6 (6)
C4—W1—N1—C1048.1 (3)C6—C7—C8—C91.2 (5)
C5—W1—N1—C10−45.3 (3)C7—C8—C9—C10−0.8 (5)
C1—W1—N1—C6169 (2)C7—C8—C9—C11−177.5 (3)
C3—W1—N1—C6−44.1 (4)C6—N1—C10—C91.0 (5)
C2—W1—N1—C644.0 (4)W1—N1—C10—C9−178.9 (2)
C4—W1—N1—C6−131.8 (4)C8—C9—C10—N1−0.3 (5)
C5—W1—N1—C6134.8 (4)C11—C9—C10—N1176.5 (3)
C1—W1—C2—O271 (4)C15—N2—C11—C9−69.3 (3)
C3—W1—C2—O2−18 (4)C14—N2—C11—C9168.8 (3)
C4—W1—C2—O22(7)C15—N2—C11—C12168.6 (3)
C5—W1—C2—O2160 (4)C14—N2—C11—C1246.7 (3)
N1—W1—C2—O2−113 (4)C10—C9—C11—N2152.7 (3)
C1—W1—C3—O3−7(10)C8—C9—C11—N2−30.6 (5)
C2—W1—C3—O384 (10)C10—C9—C11—C12−92.4 (4)
C4—W1—C3—O3−94 (10)C8—C9—C11—C1284.2 (4)
C5—W1—C3—O330 (13)N2—C11—C12—C13−35.7 (3)
N1—W1—C3—O3176 (10)C9—C11—C12—C13−157.3 (3)
C1—W1—C4—O4−71 (5)C11—C12—C13—C1412.4 (4)
C3—W1—C4—O419 (5)C15—N2—C14—C13−162.2 (3)
C2—W1—C4—O4−1(8)C11—N2—C14—C13−39.3 (3)
C5—W1—C4—O4−159 (5)C12—C13—C14—N215.9 (4)
N1—W1—C4—O4113 (5)
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