Literature DB >> 21580507

Bis[diamminesilver(I)] 5-nitro-iso-phthalate monohydrate.

Di Sun1, Geng-Geng Luo, Na Zhang, Rong-Bin Huang.   

Abstract

In the title compound, [Ag(NH(3))(2)](2)(C(8)H(3)NO(6))·H(2)O, the cations have an almost linear coordination geometry with two ammine ligands and inter-act with the water mol-ecules [Ag⋯O(water) = 2.725 (4) and 2.985 (4) Å]. In the crystal, N-H⋯O and O-H⋯O hydrogen bonds, combined with weak (lone pair)⋯π [O⋯centroid distance = 3.401 (4) Å] and π-π stacking [centroid-centroid distance = 3.975 (3) Å] inter-actions, stabilize the three-dimensional supra-molecular network.

Entities:  

Year:  2010        PMID: 21580507      PMCID: PMC2983872          DOI: 10.1107/S1600536810007725

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to crystal engineering and supra­molecular chemistry, see: Batten & Robson (1998 ▶); Blake et al. (1999 ▶); Yaghi et al. (2003 ▶). For general background to non-covalent inter­actions, see: Biswas et al. (2009 ▶); Egli & Arkhel (2007 ▶); Jeffrey et al. (1985 ▶); Mooibroek et al. (2006 ▶); Nishio et al. (1998 ▶); Rahman et al. (2003 ▶). For related structures, see: Sun, Luo, Huang et al. (2009 ▶); Sun, Luo, Xu et al. (2009 ▶); Sun, Luo, Zhang et al. (2009 ▶); You & Zhu (2004 ▶); You et al. (2004 ▶); Zheng et al. (2002 ▶, 2007 ▶).

Experimental

Crystal data

[Ag(NH3)2]2(C8H3NO6)·H2O M = 511.01 Monoclinic, a = 7.692 (2) Å b = 12.229 (3) Å c = 16.379 (4) Å β = 102.100 (4)° V = 1506.5 (7) Å3 Z = 4 Mo Kα radiation μ = 2.64 mm−1 T = 298 K 0.11 × 0.10 × 0.08 mm

Data collection

Oxford Diffraction Gemini S Ultra diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2006 ▶) T min = 0.760, T max = 0.817 7118 measured reflections 2627 independent reflections 2500 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.114 S = 1.22 2627 reflections 204 parameters H-atom parameters constrained Δρmax = 0.97 e Å−3 Δρmin = −0.98 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2006 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2006 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 1999 ▶) and SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810007725/hy2282sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810007725/hy2282Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ag(NH3)2]2(C8H3NO6)·H2OF(000) = 1000
Mr = 511.01Dx = 2.253 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4729 reflections
a = 7.692 (2) Åθ = 5.1–57.2°
b = 12.229 (3) ŵ = 2.64 mm1
c = 16.379 (4) ÅT = 298 K
β = 102.100 (4)°Block, colorless
V = 1506.5 (7) Å30.11 × 0.10 × 0.08 mm
Z = 4
Oxford Diffraction Gemini S Ultra diffractometer2627 independent reflections
Radiation source: sealed tube2500 reflections with I > 2σ(I)
graphiteRint = 0.036
Detector resolution: 16.1903 pixels mm-1θmax = 25.0°, θmin = 2.1°
ω scansh = −9→9
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2006)k = −8→14
Tmin = 0.760, Tmax = 0.817l = −17→19
7118 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046H-atom parameters constrained
wR(F2) = 0.114w = 1/[σ2(Fo2) + (0.0451P)2 + 2.1461P] where P = (Fo2 + 2Fc2)/3
S = 1.22(Δ/σ)max < 0.001
2627 reflectionsΔρmax = 0.97 e Å3
204 parametersΔρmin = −0.98 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0264 (13)
xyzUiso*/Ueq
Ag10.01233 (6)0.87015 (4)0.39354 (3)0.0561 (2)
Ag20.56988 (5)0.37352 (3)0.78293 (3)0.0444 (2)
C10.1106 (5)0.4687 (4)0.4096 (3)0.0272 (9)
C20.1513 (6)0.3606 (4)0.4283 (3)0.0277 (9)
H20.09550.30650.39220.033*
C30.2729 (5)0.3307 (4)0.4993 (3)0.0273 (9)
C40.3475 (6)0.4110 (4)0.5543 (3)0.0294 (10)
H40.42780.39290.60320.035*
C50.3022 (6)0.5176 (4)0.5362 (3)0.0281 (9)
C60.1878 (6)0.5481 (4)0.4639 (3)0.0294 (10)
H60.16310.62160.45210.035*
C7−0.0153 (6)0.4982 (4)0.3292 (3)0.0308 (10)
C80.3273 (6)0.2131 (4)0.5152 (3)0.0293 (10)
N1−0.1928 (7)0.8046 (4)0.3002 (3)0.0544 (12)
H1A−0.18670.83330.25090.065*
H1B−0.29770.82050.31200.065*
H1C−0.18050.73230.29830.065*
N20.2262 (6)0.9066 (4)0.4929 (3)0.0499 (11)
H2A0.24410.97860.49540.060*
H2B0.32390.87330.48460.060*
H2C0.20110.88350.54060.060*
N30.7101 (6)0.2725 (4)0.7167 (3)0.0411 (10)
H3A0.75760.21710.74900.049*
H3B0.79620.31080.70120.049*
H3C0.63640.24660.67160.049*
N40.4096 (5)0.4767 (4)0.8378 (2)0.0395 (10)
H4A0.47370.53330.86150.047*
H4B0.36770.43990.87640.047*
H4C0.31920.50080.79880.047*
N50.3862 (6)0.6021 (4)0.5942 (2)0.0358 (9)
O1−0.0137 (5)0.5948 (3)0.3058 (2)0.0405 (8)
O1W−0.0469 (5)0.0861 (3)0.3572 (2)0.0502 (9)
H1WA−0.03150.08710.30730.060*
H1WB0.04740.11890.38130.060*
O2−0.1083 (5)0.4259 (3)0.2916 (2)0.0502 (10)
O30.2508 (5)0.1444 (3)0.4657 (3)0.0494 (10)
O40.4452 (5)0.1927 (3)0.5764 (2)0.0412 (8)
O50.4957 (5)0.5735 (3)0.6553 (2)0.0509 (10)
O60.3436 (6)0.6952 (3)0.5786 (2)0.0567 (11)
U11U22U33U12U13U23
Ag10.0498 (3)0.0475 (3)0.0734 (4)−0.00206 (19)0.0184 (2)−0.0061 (2)
Ag20.0446 (3)0.0460 (3)0.0402 (3)0.00187 (17)0.00340 (18)−0.00385 (17)
C10.027 (2)0.030 (2)0.025 (2)0.0008 (18)0.0062 (16)0.0021 (18)
C20.032 (2)0.026 (2)0.024 (2)−0.0037 (18)0.0049 (17)−0.0045 (17)
C30.024 (2)0.028 (2)0.030 (2)0.0005 (18)0.0057 (17)0.0014 (19)
C40.030 (2)0.031 (2)0.027 (2)0.0013 (19)0.0049 (17)0.0026 (19)
C50.030 (2)0.028 (2)0.027 (2)−0.0044 (19)0.0088 (17)−0.0030 (18)
C60.028 (2)0.029 (2)0.032 (2)0.0017 (19)0.0104 (18)0.0025 (19)
C70.030 (2)0.028 (3)0.034 (2)0.005 (2)0.0069 (18)0.006 (2)
C80.031 (2)0.027 (2)0.031 (2)0.0054 (19)0.0082 (19)0.0019 (19)
N10.061 (3)0.048 (3)0.055 (3)0.006 (2)0.016 (2)0.001 (2)
N20.052 (3)0.038 (3)0.062 (3)0.006 (2)0.015 (2)0.009 (2)
N30.038 (2)0.038 (2)0.043 (2)−0.0028 (19)−0.0014 (18)−0.0036 (19)
N40.039 (2)0.039 (2)0.039 (2)−0.0006 (19)0.0032 (17)0.0000 (19)
N50.042 (2)0.035 (2)0.031 (2)−0.0080 (19)0.0082 (18)−0.0020 (18)
O10.044 (2)0.0333 (19)0.0391 (19)0.0038 (16)−0.0021 (15)0.0113 (16)
O1W0.045 (2)0.059 (3)0.043 (2)0.0005 (19)0.0004 (16)−0.0007 (19)
O20.054 (2)0.037 (2)0.047 (2)−0.0080 (18)−0.0167 (17)0.0017 (18)
O30.060 (2)0.0287 (19)0.049 (2)0.0045 (17)−0.0119 (18)−0.0091 (17)
O40.0412 (18)0.0344 (19)0.0393 (18)0.0044 (15)−0.0112 (15)0.0000 (15)
O50.060 (2)0.046 (2)0.039 (2)−0.0077 (19)−0.0089 (17)−0.0042 (17)
O60.088 (3)0.027 (2)0.049 (2)0.002 (2)−0.001 (2)−0.0022 (17)
Ag1—N12.112 (5)C7—O11.243 (6)
Ag1—N22.105 (5)C8—O31.228 (6)
Ag2—N32.088 (4)C8—O41.229 (5)
Ag2—N42.094 (4)N1—H1A0.8900
Ag1—O1Wi2.725 (4)N1—H1B0.8900
Ag2—O1Wii2.985 (4)N1—H1C0.8900
C1—C61.367 (6)N2—H2A0.8900
C1—C21.378 (6)N2—H2B0.8900
C1—C71.505 (6)N2—H2C0.8900
C2—C31.380 (6)N3—H3A0.8900
C2—H20.9300N3—H3B0.8900
C3—C41.374 (6)N3—H3C0.8900
C3—C81.505 (6)N4—H4A0.8900
C4—C51.366 (6)N4—H4B0.8900
C4—H40.9300N4—H4C0.8900
C5—C61.370 (6)N5—O61.198 (6)
C5—N51.460 (6)N5—O51.217 (5)
C6—H60.9300O1W—H1WA0.8501
C7—O21.220 (6)O1W—H1WB0.8500
N2—Ag1—N1169.90 (19)O4—C8—C3117.8 (4)
N3—Ag2—N4174.05 (16)Ag1—N1—H1A109.5
N2—Ag1—O1Wi91.79 (15)Ag1—N1—H1B109.5
N1—Ag1—O1Wi98.31 (16)H1A—N1—H1B109.5
N3—Ag2—O1Wii74.69 (14)Ag1—N1—H1C109.5
N4—Ag2—O1Wii110.21 (14)H1A—N1—H1C109.5
C6—C1—C2119.3 (4)H1B—N1—H1C109.5
C6—C1—C7120.7 (4)Ag1—N2—H2A109.5
C2—C1—C7119.9 (4)Ag1—N2—H2B109.5
C1—C2—C3121.6 (4)H2A—N2—H2B109.5
C1—C2—H2119.2Ag1—N2—H2C109.5
C3—C2—H2119.2H2A—N2—H2C109.5
C4—C3—C2118.7 (4)H2B—N2—H2C109.5
C4—C3—C8120.4 (4)Ag2—N3—H3A109.5
C2—C3—C8120.9 (4)Ag2—N3—H3B109.5
C5—C4—C3119.1 (4)H3A—N3—H3B109.5
C5—C4—H4120.4Ag2—N3—H3C109.5
C3—C4—H4120.4H3A—N3—H3C109.5
C4—C5—C6122.4 (4)H3B—N3—H3C109.5
C4—C5—N5118.5 (4)Ag2—N4—H4A109.5
C6—C5—N5119.0 (4)Ag2—N4—H4B109.5
C1—C6—C5118.8 (4)H4A—N4—H4B109.5
C1—C6—H6120.6Ag2—N4—H4C109.5
C5—C6—H6120.6H4A—N4—H4C109.5
O2—C7—O1125.1 (4)H4B—N4—H4C109.5
O2—C7—C1118.0 (4)O6—N5—O5124.1 (4)
O1—C7—C1116.8 (4)O6—N5—C5118.1 (4)
O3—C8—O4124.7 (4)O5—N5—C5117.8 (4)
O3—C8—C3117.5 (4)H1WA—O1W—H1WB99.3
D—H···AD—HH···AD···AD—H···A
O1W—H1WA···O1iii0.851.962.807 (5)177
O1W—H1WB···O30.851.882.684 (5)156
N1—H1B···O4iv0.892.353.082 (6)140
N1—H1C···O10.892.102.905 (6)149
N2—H2A···O3i0.892.092.954 (6)164
N2—H2B···O4v0.892.363.218 (6)163
N2—H2C···O1Wiv0.892.283.059 (6)147
N2—H2C···O60.892.572.990 (6)110
N3—H3A···O2ii0.892.082.937 (6)163
N3—H3B···O1v0.892.062.930 (6)167
N3—H3C···O40.892.022.901 (5)173
N4—H4A···O4vi0.892.233.088 (6)163
N4—H4B···O3vii0.892.143.024 (6)176
N4—H4C···O2iv0.892.153.036 (5)175
Table 1

Selected bond lengths (Å)

Ag1—N12.112 (5)
Ag1—N22.105 (5)
Ag2—N32.088 (4)
Ag2—N42.094 (4)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WA⋯O1i0.851.962.807 (5)177
O1W—H1WB⋯O30.851.882.684 (5)156
N1—H1B⋯O4ii0.892.353.082 (6)140
N1—H1C⋯O10.892.102.905 (6)149
N2—H2A⋯O3iii0.892.092.954 (6)164
N2—H2B⋯O4iv0.892.363.218 (6)163
N2—H2C⋯O1Wii0.892.283.059 (6)147
N2—H2C⋯O60.892.572.990 (6)110
N3—H3A⋯O2v0.892.082.937 (6)163
N3—H3B⋯O1iv0.892.062.930 (6)167
N3—H3C⋯O40.892.022.901 (5)173
N4—H4A⋯O4vi0.892.233.088 (6)163
N4—H4B⋯O3vii0.892.143.024 (6)176
N4—H4C⋯O2ii0.892.153.036 (5)175

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .

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