Literature DB >> 21580494

Bis(μ-4-chloro-2-oxidobenzoato)bis-[(1,10-phenanthroline)copper(II)] dihydrate.

Jing-Jing Nie1, Jun-Hua Li, Duan-Jun Xu.   

Abstract

The structure of the the title compound, [Cu(2)(C(7)H(3)ClO(3))(2)(C(12)H(8)N(2))(2)]·2H(2)O, consists of a dimeric unit involving a planar Cu(2)O(2) group arranged around an inversion center. The coordination sphere of the Cu(II) atom can be described as an elongated distorted square pyramid where the basal plane is formed by the two N atoms of the 1,10-phenanthroline mol-ecule and the two O atoms of the hydroxy-chloro-benzoate (hcbe) anion. The long apical Cu-O distance of 2.569 (2) Å involves the O atom of a symmetry-related hcbe anion, building up the dinuclear unit. Each dinuclear unit is connected through O-H⋯O hydrogen bonds involving two water mol-ecules, resulting in an R(4) (2)(8) graph-set motif and building up an infinite chain parallel to (10). C-H⋯O inter-actions further stabilize the chain.

Entities:  

Year:  2010        PMID: 21580494      PMCID: PMC2983983          DOI: 10.1107/S1600536810008354

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For our ongoing investigation of the nature of π–π stacking, see: Su & Xu (2004 ▶); Xu et al. (2007 ▶). For related structures, see: Yang et al. (2006 ▶); Garland et al. (1987 ▶); Li et al. (1995 ▶); Fan & Zhu (2005 ▶); Song et al. (2007 ▶). For a structural discussion on hydrogen bonding, see: Etter et al. (1990 ▶); Bernstein et al. (1995 ▶).

Experimental

Crystal data

[Cu2(C7H3ClO3)2(C12H8N2)2]·2H2O M = 864.60 Monoclinic, a = 8.1941 (17) Å b = 18.851 (4) Å c = 11.873 (3) Å β = 105.993 (8)° V = 1763.0 (6) Å3 Z = 2 Mo Kα radiation μ = 1.42 mm−1 T = 294 K 0.33 × 0.30 × 0.22 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.656, T max = 0.730 18894 measured reflections 3163 independent reflections 2162 reflections with I > 2σ(I) R int = 0.047

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.103 S = 1.03 3163 reflections 244 parameters H-atom parameters constrained Δρmax = 0.58 e Å−3 Δρmin = −0.36 e Å−3 Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810008354/dn2542sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810008354/dn2542Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu2(C7H3ClO3)2(C12H8N2)2]·2H2OF(000) = 876
Mr = 864.60Dx = 1.629 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5352 reflections
a = 8.1941 (17) Åθ = 2.2–24.2°
b = 18.851 (4) ŵ = 1.42 mm1
c = 11.873 (3) ÅT = 294 K
β = 105.993 (8)°Prism, blue
V = 1763.0 (6) Å30.33 × 0.30 × 0.22 mm
Z = 2
Rigaku R-AXIS RAPID IP diffractometer3163 independent reflections
Radiation source: fine-focus sealed tube2162 reflections with I > 2σ(I)
graphiteRint = 0.047
Detector resolution: 10.0 pixels mm-1θmax = 25.2°, θmin = 2.1°
ω scansh = −9→9
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −22→22
Tmin = 0.656, Tmax = 0.730l = −13→14
18894 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0509P)2 + 0.5996P] where P = (Fo2 + 2Fc2)/3
3163 reflections(Δ/σ)max = 0.001
244 parametersΔρmax = 0.58 e Å3
0 restraintsΔρmin = −0.35 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu0.28977 (4)0.501289 (19)0.46012 (3)0.04370 (15)
Cl0.68680 (17)0.80306 (6)0.36270 (13)0.1107 (5)
N10.2931 (3)0.50654 (13)0.6296 (2)0.0456 (6)
N20.1240 (3)0.42264 (13)0.4601 (2)0.0480 (6)
O10.2426 (3)0.49404 (12)0.2962 (2)0.0596 (6)
O20.2234 (3)0.52593 (16)0.1153 (2)0.0750 (7)
O30.4451 (3)0.57734 (11)0.47282 (18)0.0507 (5)
C10.2743 (4)0.5384 (2)0.2219 (3)0.0555 (9)
C20.3717 (4)0.60392 (18)0.2646 (3)0.0512 (8)
C30.4487 (4)0.61966 (16)0.3838 (3)0.0472 (7)
C40.5430 (4)0.68293 (17)0.4110 (3)0.0577 (9)
H40.59500.69410.48890.069*
C50.5593 (5)0.72807 (19)0.3250 (4)0.0718 (11)
C60.4837 (5)0.7141 (2)0.2088 (4)0.0851 (14)
H60.49470.74550.15090.102*
C70.3919 (5)0.6528 (2)0.1802 (3)0.0711 (11)
H70.34080.64310.10150.085*
C80.3797 (4)0.55026 (19)0.7127 (3)0.0569 (9)
H80.44240.58680.69230.068*
C90.3792 (5)0.5429 (2)0.8297 (3)0.0728 (11)
H90.44010.57450.88570.087*
C100.2897 (5)0.4896 (2)0.8616 (4)0.0765 (13)
H100.28920.48470.93940.092*
C110.1979 (5)0.4418 (2)0.7767 (3)0.0635 (10)
C120.1001 (6)0.3835 (3)0.7997 (4)0.0854 (14)
H120.09710.37460.87610.102*
C130.0125 (6)0.3412 (3)0.7126 (5)0.0876 (14)
H13−0.05100.30410.73060.105*
C140.0135 (5)0.3514 (2)0.5930 (4)0.0675 (11)
C15−0.0751 (6)0.3107 (2)0.4968 (5)0.0882 (14)
H15−0.14260.27310.50760.106*
C16−0.0626 (5)0.3259 (2)0.3884 (5)0.0849 (13)
H16−0.12230.29900.32470.102*
C170.0394 (5)0.38181 (19)0.3716 (3)0.0639 (10)
H170.04860.39090.29660.077*
C180.1106 (4)0.40810 (17)0.5688 (3)0.0505 (8)
C190.2019 (4)0.45334 (17)0.6605 (3)0.0499 (8)
O1W0.0002 (4)0.59767 (16)−0.0734 (2)0.0934 (9)
H1A0.06530.5735−0.01240.140*
H1B−0.09410.5733−0.09600.140*
U11U22U33U12U13U23
Cu0.0459 (2)0.0543 (2)0.0309 (2)−0.00153 (17)0.01078 (16)0.00139 (17)
Cl0.1106 (10)0.0650 (6)0.1553 (13)−0.0153 (6)0.0347 (9)0.0283 (7)
N10.0459 (14)0.0589 (15)0.0335 (14)0.0089 (13)0.0134 (11)−0.0016 (13)
N20.0424 (15)0.0544 (15)0.0472 (17)0.0028 (12)0.0124 (12)−0.0025 (13)
O10.0688 (16)0.0716 (15)0.0349 (13)−0.0104 (12)0.0085 (11)−0.0014 (11)
O20.0772 (18)0.117 (2)0.0277 (14)0.0076 (16)0.0085 (12)0.0011 (13)
O30.0577 (13)0.0586 (13)0.0357 (12)−0.0060 (10)0.0125 (10)0.0031 (10)
C10.0470 (19)0.081 (2)0.038 (2)0.0107 (18)0.0103 (15)0.0060 (18)
C20.0443 (18)0.069 (2)0.0419 (19)0.0106 (16)0.0144 (15)0.0163 (16)
C30.0443 (18)0.0539 (18)0.046 (2)0.0079 (15)0.0176 (15)0.0062 (16)
C40.057 (2)0.0537 (19)0.064 (2)0.0052 (16)0.0197 (18)0.0051 (17)
C50.060 (2)0.058 (2)0.099 (3)0.0067 (18)0.025 (2)0.025 (2)
C60.075 (3)0.095 (3)0.089 (3)0.008 (2)0.028 (3)0.053 (3)
C70.063 (2)0.099 (3)0.052 (2)0.010 (2)0.0164 (19)0.028 (2)
C80.056 (2)0.071 (2)0.042 (2)0.0117 (17)0.0109 (16)−0.0050 (17)
C90.074 (3)0.102 (3)0.038 (2)0.021 (2)0.0075 (19)−0.011 (2)
C100.078 (3)0.119 (4)0.040 (2)0.034 (3)0.028 (2)0.013 (2)
C110.058 (2)0.089 (3)0.052 (2)0.024 (2)0.0296 (18)0.018 (2)
C120.076 (3)0.118 (4)0.078 (3)0.031 (3)0.050 (3)0.045 (3)
C130.074 (3)0.089 (3)0.117 (4)0.009 (2)0.055 (3)0.040 (3)
C140.054 (2)0.064 (2)0.094 (3)0.0047 (18)0.035 (2)0.016 (2)
C150.077 (3)0.062 (2)0.129 (5)−0.013 (2)0.034 (3)0.004 (3)
C160.069 (3)0.069 (3)0.113 (4)−0.014 (2)0.019 (3)−0.024 (3)
C170.057 (2)0.062 (2)0.069 (3)0.0008 (18)0.0128 (19)−0.0129 (19)
C180.0417 (18)0.0575 (19)0.055 (2)0.0093 (15)0.0183 (16)0.0081 (17)
C190.0462 (19)0.062 (2)0.047 (2)0.0175 (16)0.0226 (15)0.0131 (16)
O1W0.097 (2)0.111 (2)0.0617 (18)0.0296 (18)0.0041 (15)0.0005 (16)
Cu—O11.882 (2)C8—C91.397 (5)
Cu—O31.895 (2)C8—H80.9300
Cu—O3i2.569 (2)C9—C101.358 (6)
Cu—N12.007 (3)C9—H90.9300
Cu—N22.011 (3)C10—C111.405 (6)
Cl—C51.741 (4)C10—H100.9300
N1—C81.331 (4)C11—C191.406 (4)
N1—C191.360 (4)C11—C121.430 (6)
N2—C171.332 (4)C12—C131.346 (6)
N2—C181.353 (4)C12—H120.9300
O1—C11.292 (4)C13—C141.435 (6)
O2—C11.241 (4)C13—H130.9300
O3—C31.331 (4)C14—C151.401 (6)
C1—C21.482 (5)C14—C181.409 (5)
C2—C71.404 (4)C15—C161.350 (6)
C2—C31.413 (4)C15—H150.9300
C3—C41.409 (5)C16—C171.393 (5)
C4—C51.363 (5)C16—H160.9300
C4—H40.9300C17—H170.9300
C5—C61.374 (6)C18—C191.423 (5)
C6—C71.370 (6)O1W—H1A0.8969
C6—H60.9300O1W—H1B0.8747
C7—H70.9300
O1—Cu—O394.54 (9)C2—C7—H7118.6
O1—Cu—N1169.27 (10)N1—C8—C9121.9 (4)
O3—Cu—N193.42 (10)N1—C8—H8119.1
O1—Cu—N290.01 (10)C9—C8—H8119.1
O3—Cu—N2175.25 (9)C10—C9—C8120.1 (4)
N1—Cu—N281.90 (11)C10—C9—H9120.0
O1—Cu—O3i101.17 (9)C8—C9—H9120.0
O3—Cu—O3i85.40 (9)C9—C10—C11119.8 (4)
N1—Cu—O3i86.62 (8)C9—C10—H10120.1
N2—Cu—O3i95.07 (9)C11—C10—H10120.1
C8—N1—C19118.5 (3)C10—C11—C19116.9 (4)
C8—N1—Cu129.1 (2)C10—C11—C12125.0 (4)
C19—N1—Cu112.2 (2)C19—C11—C12118.1 (4)
C17—N2—C18118.3 (3)C13—C12—C11121.2 (4)
C17—N2—Cu129.1 (3)C13—C12—H12119.4
C18—N2—Cu112.4 (2)C11—C12—H12119.4
C1—O1—Cu129.5 (2)C12—C13—C14122.2 (4)
C3—O3—Cu123.5 (2)C12—C13—H13118.9
O2—C1—O1119.9 (3)C14—C13—H13118.9
O2—C1—C2120.3 (3)C15—C14—C18116.3 (4)
O1—C1—C2119.8 (3)C15—C14—C13126.2 (4)
C7—C2—C3118.0 (3)C18—C14—C13117.5 (4)
C7—C2—C1117.4 (3)C16—C15—C14120.2 (4)
C3—C2—C1124.6 (3)C16—C15—H15119.9
O3—C3—C4117.2 (3)C14—C15—H15119.9
O3—C3—C2124.6 (3)C15—C16—C17120.3 (4)
C4—C3—C2118.2 (3)C15—C16—H16119.9
C5—C4—C3121.2 (4)C17—C16—H16119.9
C5—C4—H4119.4N2—C17—C16121.8 (4)
C3—C4—H4119.4N2—C17—H17119.1
C6—C5—C4121.5 (4)C16—C17—H17119.1
C6—C5—Cl119.1 (3)N2—C18—C14123.2 (3)
C4—C5—Cl119.4 (3)N2—C18—C19116.4 (3)
C5—C6—C7118.5 (3)C14—C18—C19120.4 (3)
C5—C6—H6120.8N1—C19—C11122.8 (3)
C7—C6—H6120.8N1—C19—C18116.6 (3)
C6—C7—C2122.7 (4)C11—C19—C18120.6 (3)
C6—C7—H7118.6H1A—O1W—H1B105.1
D—H···AD—HH···AD···AD—H···A
O1W—H1A···O20.901.922.817 (4)175
O1W—H1B···O2ii0.882.132.921 (4)150
C10—H10···O2iii0.932.423.277 (5)153
C17—H17···O1Wii0.932.583.487 (4)166
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1A⋯O20.901.922.817 (4)175
O1W—H1B⋯O2i0.882.132.921 (4)150
C10—H10⋯O2ii0.932.423.277 (5)153
C17—H17⋯O1Wi0.932.583.487 (4)166

Symmetry codes: (i) ; (ii) .

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