Literature DB >> 21580453

3-Chloro-6-{4-[3-(4-chloro-phen-oxy)prop-yl]piperazin-1-yl}pyridazine.

Hongliang Wang, Junhai Xiao, Xian Zhang, Tiemin Sun, Song Li.   

Abstract

In the title compound, C(17)H(20)Cl(2)N(4)O, the piperazine ring adopts a chair conformation and the dihedral angle between the pyridazine ring and the benzene ring is 36.3 (1)°. In the crystal, weak C-H⋯O and C-H⋯(N,N) inter-actions help to establish the packing, which also features short inter-molecular Cl⋯Cl contacts [3.331 (2) Å].

Entities:  

Year:  2010        PMID: 21580453      PMCID: PMC2983611          DOI: 10.1107/S1600536810005337

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological properties of 3-(piperazin-1-yl)pyridazine derivatives, see: Monge et al. (1991 ▶); Tucker et al. (1998 ▶). For the synthesis, see: Fan et al. (2009 ▶).

Experimental

Crystal data

C17H20Cl2N4O M = 367.27 Monoclinic, a = 39.774 (18) Å b = 5.757 (3) Å c = 14.924 (7) Å β = 93.107 (9)° V = 3412 (3) Å3 Z = 8 Mo Kα radiation μ = 0.39 mm−1 T = 113 K 0.20 × 0.18 × 0.08 mm

Data collection

Rigaku Saturn CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.926, T max = 0.969 11904 measured reflections 2996 independent reflections 2030 reflections with I > 2σ(I) R int = 0.061

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.159 S = 1.09 2996 reflections 217 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.33 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810005337/hb5330sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810005337/hb5330Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H20Cl2N4OF(000) = 1536
Mr = 367.27Dx = 1.430 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
a = 39.774 (18) ÅCell parameters from 5597 reflections
b = 5.757 (3) Åθ = 2.1–28.0°
c = 14.924 (7) ŵ = 0.39 mm1
β = 93.107 (9)°T = 113 K
V = 3412 (3) Å3Prism, colourless
Z = 80.20 × 0.18 × 0.08 mm
Rigaku Saturn CCD area-detector diffractometer2996 independent reflections
Radiation source: rotating anode2030 reflections with I > 2σ(I)
multilayerRint = 0.061
Detector resolution: 14.63 pixels mm-1θmax = 25.0°, θmin = 2.1°
ω and φ scansh = −46→46
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)k = −6→6
Tmin = 0.926, Tmax = 0.969l = −15→17
11904 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.050Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.159H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0834P)2] where P = (Fo2 + 2Fc2)/3
2996 reflections(Δ/σ)max = 0.003
217 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl11.06826 (2)−0.31802 (19)0.30198 (6)0.0238 (3)
Cl20.64299 (2)0.03379 (19)0.75503 (6)0.0252 (3)
O10.77076 (5)0.0299 (4)0.57543 (16)0.0172 (6)
N11.01144 (7)−0.4149 (6)0.37004 (19)0.0191 (8)
N20.98066 (6)−0.3697 (6)0.40118 (19)0.0177 (7)
N30.93922 (6)−0.1129 (5)0.44101 (19)0.0159 (7)
N40.87083 (6)−0.0635 (5)0.49145 (19)0.0149 (7)
C11.02999 (8)−0.2401 (7)0.3457 (2)0.0177 (9)
C21.02128 (8)−0.0067 (7)0.3520 (2)0.0182 (9)
H21.03600.11330.33490.022*
C30.99070 (8)0.0412 (7)0.3837 (2)0.0182 (8)
H30.98320.19670.38980.022*
C40.97035 (8)−0.1495 (7)0.4072 (2)0.0154 (8)
C50.92000 (8)−0.3152 (7)0.4675 (2)0.0180 (8)
H5A0.9353−0.43010.49750.022*
H5B0.9090−0.38920.41370.022*
C60.89344 (8)−0.2413 (7)0.5311 (2)0.0179 (9)
H6A0.8800−0.37860.54710.021*
H6B0.9047−0.17970.58690.021*
C70.89091 (8)0.1374 (7)0.4665 (2)0.0156 (8)
H7A0.90210.20570.52120.019*
H7B0.87590.25690.43840.019*
C80.91722 (8)0.0697 (7)0.4018 (2)0.0164 (8)
H8A0.90600.01300.34510.020*
H8B0.93090.20740.38790.020*
C90.84595 (8)−0.0032 (7)0.5562 (2)0.0169 (8)
H9A0.85790.04710.61280.020*
H9B0.8328−0.14380.56940.020*
C100.82186 (8)0.1877 (7)0.5241 (2)0.0169 (8)
H10A0.83460.33450.51930.020*
H10B0.81230.14780.46350.020*
C110.79342 (8)0.2255 (7)0.5855 (2)0.0158 (8)
H11A0.80240.23780.64850.019*
H11B0.78140.37130.56930.019*
C120.74176 (8)0.0403 (7)0.6207 (2)0.0146 (8)
C130.71859 (8)−0.1366 (7)0.6022 (2)0.0171 (8)
H130.7236−0.25630.56120.020*
C140.68822 (8)−0.1390 (7)0.6433 (2)0.0163 (8)
H140.6723−0.25870.63010.020*
C150.68135 (8)0.0346 (7)0.7035 (2)0.0169 (8)
C160.70436 (8)0.2093 (7)0.7240 (2)0.0181 (8)
H160.69950.32590.76640.022*
C170.73474 (8)0.2130 (7)0.6819 (2)0.0167 (8)
H170.75060.33310.69510.020*
U11U22U33U12U13U23
Cl10.0167 (5)0.0310 (7)0.0242 (5)0.0050 (4)0.0056 (4)0.0013 (4)
Cl20.0177 (5)0.0342 (7)0.0246 (5)−0.0029 (4)0.0080 (4)−0.0021 (4)
O10.0139 (12)0.0165 (16)0.0217 (14)−0.0030 (11)0.0047 (10)−0.0055 (12)
N10.0185 (15)0.018 (2)0.0211 (17)0.0044 (13)0.0046 (13)0.0023 (14)
N20.0160 (15)0.015 (2)0.0222 (17)0.0029 (13)0.0045 (12)0.0017 (14)
N30.0141 (14)0.0119 (19)0.0220 (17)0.0007 (12)0.0046 (12)0.0033 (13)
N40.0135 (14)0.0108 (19)0.0207 (16)0.0004 (12)0.0046 (12)0.0012 (13)
C10.0127 (16)0.024 (3)0.0170 (18)0.0020 (16)0.0017 (14)−0.0004 (17)
C20.0168 (18)0.017 (3)0.021 (2)−0.0021 (16)0.0000 (15)0.0007 (17)
C30.0179 (18)0.014 (2)0.022 (2)0.0014 (15)0.0007 (15)0.0009 (17)
C40.0165 (17)0.013 (2)0.0164 (19)0.0002 (15)−0.0012 (14)−0.0008 (16)
C50.0167 (17)0.012 (2)0.026 (2)0.0007 (16)0.0029 (15)0.0022 (17)
C60.0166 (17)0.013 (2)0.024 (2)−0.0004 (15)0.0030 (14)0.0042 (16)
C70.0166 (17)0.011 (2)0.020 (2)0.0008 (15)0.0024 (14)0.0008 (16)
C80.0179 (17)0.015 (2)0.0172 (19)0.0014 (15)0.0034 (14)0.0037 (16)
C90.0165 (17)0.017 (2)0.0170 (19)−0.0013 (16)0.0017 (14)0.0026 (16)
C100.0167 (17)0.015 (2)0.0197 (19)−0.0008 (15)0.0038 (14)0.0008 (16)
C110.0158 (17)0.012 (2)0.0197 (19)−0.0019 (15)0.0014 (14)0.0010 (16)
C120.0130 (17)0.016 (2)0.0153 (18)0.0018 (15)0.0008 (13)0.0033 (16)
C130.0194 (18)0.014 (2)0.0174 (19)0.0016 (16)0.0000 (14)−0.0024 (16)
C140.0176 (17)0.015 (2)0.0166 (19)−0.0045 (15)−0.0015 (14)0.0020 (16)
C150.0134 (17)0.021 (2)0.0166 (19)0.0017 (16)0.0036 (14)0.0041 (16)
C160.0205 (18)0.017 (2)0.0164 (19)0.0034 (16)0.0002 (14)−0.0034 (16)
C170.0157 (17)0.018 (2)0.0164 (19)−0.0034 (15)−0.0006 (14)0.0004 (16)
Cl1—C11.747 (3)C7—C81.513 (4)
Cl2—C151.745 (3)C7—H7A0.9900
O1—C121.369 (4)C7—H7B0.9900
O1—C111.445 (4)C8—H8A0.9900
N1—C11.311 (5)C8—H8B0.9900
N1—N21.358 (4)C9—C101.518 (5)
N2—C41.337 (5)C9—H9A0.9900
N3—C41.378 (4)C9—H9B0.9900
N3—C51.459 (5)C10—C111.509 (5)
N3—C81.469 (4)C10—H10A0.9900
N4—C91.462 (4)C10—H10B0.9900
N4—C71.465 (4)C11—H11A0.9900
N4—C61.466 (4)C11—H11B0.9900
C1—C21.392 (5)C12—C171.389 (5)
C2—C31.357 (5)C12—C131.391 (5)
C2—H20.9500C13—C141.383 (5)
C3—C41.419 (5)C13—H130.9500
C3—H30.9500C14—C151.382 (5)
C5—C61.518 (5)C14—H140.9500
C5—H5A0.9900C15—C161.383 (5)
C5—H5B0.9900C16—C171.392 (5)
C6—H6A0.9900C16—H160.9500
C6—H6B0.9900C17—H170.9500
C12—O1—C11116.9 (3)C7—C8—H8A109.6
C1—N1—N2118.6 (3)N3—C8—H8B109.6
C4—N2—N1119.4 (3)C7—C8—H8B109.6
C4—N3—C5118.2 (3)H8A—C8—H8B108.1
C4—N3—C8119.4 (3)N4—C9—C10113.7 (3)
C5—N3—C8111.7 (3)N4—C9—H9A108.8
C9—N4—C7112.2 (3)C10—C9—H9A108.8
C9—N4—C6108.8 (3)N4—C9—H9B108.8
C7—N4—C6108.8 (3)C10—C9—H9B108.8
N1—C1—C2125.2 (3)H9A—C9—H9B107.7
N1—C1—Cl1114.9 (3)C11—C10—C9113.2 (3)
C2—C1—Cl1119.9 (3)C11—C10—H10A108.9
C3—C2—C1116.8 (3)C9—C10—H10A108.9
C3—C2—H2121.6C11—C10—H10B108.9
C1—C2—H2121.6C9—C10—H10B108.9
C2—C3—C4117.6 (4)H10A—C10—H10B107.7
C2—C3—H3121.2O1—C11—C10108.0 (3)
C4—C3—H3121.2O1—C11—H11A110.1
N2—C4—N3117.0 (3)C10—C11—H11A110.1
N2—C4—C3122.4 (3)O1—C11—H11B110.1
N3—C4—C3120.5 (3)C10—C11—H11B110.1
N3—C5—C6109.8 (3)H11A—C11—H11B108.4
N3—C5—H5A109.7O1—C12—C17124.1 (3)
C6—C5—H5A109.7O1—C12—C13115.9 (3)
N3—C5—H5B109.7C17—C12—C13120.0 (3)
C6—C5—H5B109.7C14—C13—C12120.3 (3)
H5A—C5—H5B108.2C14—C13—H13119.8
N4—C6—C5112.1 (3)C12—C13—H13119.8
N4—C6—H6A109.2C15—C14—C13119.3 (3)
C5—C6—H6A109.2C15—C14—H14120.4
N4—C6—H6B109.2C13—C14—H14120.4
C5—C6—H6B109.2C14—C15—C16121.2 (3)
H6A—C6—H6B107.9C14—C15—Cl2119.6 (3)
N4—C7—C8111.3 (3)C16—C15—Cl2119.3 (3)
N4—C7—H7A109.4C15—C16—C17119.5 (4)
C8—C7—H7A109.4C15—C16—H16120.3
N4—C7—H7B109.4C17—C16—H16120.3
C8—C7—H7B109.4C12—C17—C16119.8 (3)
H7A—C7—H7B108.0C12—C17—H17120.1
N3—C8—C7110.4 (3)C16—C17—H17120.1
N3—C8—H8A109.6
C1—N1—N2—C4−0.9 (5)C4—N3—C8—C7−160.2 (3)
N2—N1—C1—C22.5 (5)C5—N3—C8—C756.0 (4)
N2—N1—C1—Cl1−177.3 (2)N4—C7—C8—N3−57.3 (4)
N1—C1—C2—C3−1.9 (5)C7—N4—C9—C1057.1 (4)
Cl1—C1—C2—C3177.8 (2)C6—N4—C9—C10177.6 (3)
C1—C2—C3—C4−0.2 (5)N4—C9—C10—C11172.0 (3)
N1—N2—C4—N3−178.7 (3)C12—O1—C11—C10−175.1 (3)
N1—N2—C4—C3−1.1 (5)C9—C10—C11—O1−71.7 (4)
C5—N3—C4—N20.0 (5)C11—O1—C12—C17−7.1 (5)
C8—N3—C4—N2−141.5 (3)C11—O1—C12—C13173.0 (3)
C5—N3—C4—C3−177.5 (3)O1—C12—C13—C14−178.8 (3)
C8—N3—C4—C341.0 (5)C17—C12—C13—C141.3 (5)
C2—C3—C4—N21.6 (5)C12—C13—C14—C15−0.8 (5)
C2—C3—C4—N3179.1 (3)C13—C14—C15—C16−0.5 (5)
C4—N3—C5—C6160.3 (3)C13—C14—C15—Cl2179.6 (3)
C8—N3—C5—C6−55.4 (4)C14—C15—C16—C171.2 (5)
C9—N4—C6—C5179.6 (3)Cl2—C15—C16—C17−178.9 (3)
C7—N4—C6—C5−57.9 (4)O1—C12—C17—C16179.5 (3)
N3—C5—C6—N457.0 (4)C13—C12—C17—C16−0.6 (5)
C9—N4—C7—C8178.2 (3)C15—C16—C17—C12−0.6 (5)
C6—N4—C7—C857.7 (3)
D—H···AD—HH···AD···AD—H···A
C3—H3···N1i0.952.533.247 (6)133
C3—H3···N2i0.952.503.427 (6)164
C13—H13···O1ii0.952.603.529 (5)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯N1i0.952.533.247 (6)133
C3—H3⋯N2i0.952.503.427 (6)164
C13—H13⋯O1ii0.952.603.529 (5)168

Symmetry codes: (i) ; (ii) .

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