Literature DB >> 21580441

Methyl 3,5-bis-[(4-hydroxy-methyl-2-methoxy-phen-oxy)meth-yl]benzoate.

Muhammad Nadeem Arshad, Scott T Mough, John C Goeltz, K Travis Holman.   

Abstract

In the title compound, C(26)H(28)O(8), the central aromatic ring forms dihedral angles of 24.32 (11) and 80.19 (7)° with the two adjoining vanillyl alcohol rings. In the crystal, O-H⋯O hydrogen bonds connect the mol-ecules, forming a hydrogen-bonded sheet-like motif extended in the ab plane.

Entities:  

Year:  2010        PMID: 21580441      PMCID: PMC2983507          DOI: 10.1107/S160053681000677X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of and background to adjoined vanillyl alcohols, see: Mough et al. (2004 ▶); Mough & Holman (2008 ▶). For background to cryptophanes, see: Brotin & Dutasta (2009 ▶).

Experimental

Crystal data

C26H28O8 M = 468.48 Triclinic, a = 4.7707 (12) Å b = 14.844 (4) Å c = 16.349 (4) Å α = 99.801 (5)° β = 95.692 (5)° γ = 92.821 (5)° V = 1132.7 (5) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 173 K 0.50 × 0.25 × 0.05 mm

Data collection

Bruker SMART 1K diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.951, T max = 0.995 6559 measured reflections 4394 independent reflections 2197 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.128 S = 0.85 4394 reflections 312 parameters H-atom parameters constrained Δρmax = 0.40 e Å−3 Δρmin = −0.22 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶), PLATON (Spek, 2009 ▶) and X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681000677X/ng2730sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681000677X/ng2730Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C26H28O8Z = 2
Mr = 468.48F(000) = 496
Triclinic, P1Dx = 1.374 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 4.7707 (12) ÅCell parameters from 1285 reflections
b = 14.844 (4) Åθ = 2.5–24.5°
c = 16.349 (4) ŵ = 0.10 mm1
α = 99.801 (5)°T = 173 K
β = 95.692 (5)°Needle, pale yellow
γ = 92.821 (5)°0.50 × 0.25 × 0.05 mm
V = 1132.7 (5) Å3
Bruker SMART K1 diffractometer4394 independent reflections
Radiation source: fine-focus sealed tube2197 reflections with I > 2σ(I)
graphiteRint = 0.037
ω scanθmax = 26.0°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −5→5
Tmin = 0.951, Tmax = 0.995k = −16→18
6559 measured reflectionsl = −18→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.128H-atom parameters constrained
S = 0.85w = 1/[σ2(Fo2) + (0.0568P)2] where P = (Fo2 + 2Fc2)/3
4394 reflections(Δ/σ)max < 0.001
312 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.8577 (4)0.44795 (11)0.18004 (10)0.0323 (5)
C10.3350 (6)0.66420 (18)0.21353 (17)0.0325 (7)
O20.6676 (4)0.49101 (12)0.32243 (10)0.0400 (5)
C20.4117 (6)0.61493 (18)0.27658 (17)0.0329 (7)
H20.34340.63100.32940.039*
O30.2404 (4)0.80315 (13)0.30289 (13)0.0490 (6)
H30.10810.83460.31910.059*
C30.5843 (6)0.54346 (18)0.26403 (16)0.0319 (7)
O41.3168 (6)0.15167 (15)−0.10157 (14)0.0725 (8)
C40.6859 (5)0.51921 (17)0.18579 (16)0.0285 (6)
O51.6491 (5)0.09734 (14)−0.02106 (13)0.0614 (7)
C50.6078 (5)0.56715 (18)0.12281 (16)0.0299 (7)
H50.67270.55080.06950.036*
O61.4405 (4)0.26847 (12)0.34342 (10)0.0352 (5)
C60.4340 (6)0.63941 (17)0.13746 (16)0.0319 (7)
H60.38280.67230.09390.038*
O71.1515 (4)0.28885 (12)0.46990 (11)0.0436 (5)
C70.1416 (6)0.74113 (18)0.22818 (17)0.0409 (8)
H7A0.13260.77420.18030.049*
H7B−0.05120.71570.23240.049*
O80.7672 (4)−0.11335 (12)0.34750 (13)0.0489 (6)
H80.6119−0.14070.32630.059*
C80.5065 (7)0.4943 (2)0.39253 (16)0.0499 (9)
H8A0.55030.55320.43030.075*
H8B0.55470.44430.42240.075*
H8C0.30450.48770.37270.075*
C90.9429 (6)0.41381 (17)0.10055 (15)0.0304 (7)
H9A1.04100.46370.07890.036*
H9B0.77550.38970.06070.036*
C101.1380 (6)0.33864 (17)0.10909 (16)0.0286 (6)
C111.2673 (5)0.32889 (17)0.18610 (16)0.0283 (6)
H111.22180.36730.23500.034*
C121.4638 (5)0.26345 (17)0.19325 (16)0.0287 (6)
C131.5267 (6)0.20702 (18)0.12191 (17)0.0351 (7)
H131.66230.16280.12610.042*
C141.3922 (6)0.21470 (18)0.04403 (17)0.0373 (7)
C151.1980 (6)0.28043 (17)0.03803 (17)0.0327 (7)
H151.10550.2856−0.01500.039*
C161.4431 (8)0.1529 (2)−0.0346 (2)0.0472 (9)
C171.7031 (9)0.0358 (2)−0.0969 (2)0.0867 (14)
H17A1.52720.0010−0.12260.130*
H17B1.8436−0.0066−0.08270.130*
H17C1.77460.0719−0.13630.130*
C181.6184 (6)0.25862 (18)0.27714 (16)0.0357 (7)
H18A1.70480.19900.27390.043*
H18B1.77300.30750.29040.043*
C191.2662 (5)0.19350 (18)0.34944 (16)0.0300 (7)
C201.2295 (6)0.11288 (18)0.29360 (16)0.0338 (7)
H201.32780.10600.24540.041*
C211.0492 (6)0.04030 (18)0.30645 (16)0.0353 (7)
H211.0240−0.01490.26660.042*
C220.9088 (6)0.04871 (18)0.37649 (16)0.0310 (7)
C230.9420 (6)0.13196 (18)0.43279 (16)0.0346 (7)
H230.84270.13880.48080.042*
C241.1169 (6)0.20460 (18)0.41988 (16)0.0318 (7)
C250.7190 (6)−0.02789 (18)0.39519 (17)0.0374 (7)
H25A0.7527−0.03110.45530.045*
H25B0.5194−0.01450.38300.045*
C260.9726 (7)0.3043 (2)0.53515 (18)0.0574 (10)
H26A0.77490.29210.51130.086*
H26B1.00320.36810.56390.086*
H26C1.01670.26340.57500.086*
U11U22U33U12U13U23
O10.0385 (12)0.0315 (11)0.0290 (10)0.0110 (9)0.0096 (9)0.0052 (8)
C10.0261 (16)0.0276 (16)0.0426 (17)−0.0002 (12)0.0008 (14)0.0049 (13)
O20.0550 (14)0.0404 (12)0.0295 (10)0.0163 (10)0.0141 (10)0.0110 (9)
C20.0346 (17)0.0310 (17)0.0326 (16)0.0031 (13)0.0112 (14)−0.0002 (13)
O30.0348 (13)0.0368 (13)0.0694 (14)0.0063 (10)0.0067 (11)−0.0090 (11)
C30.0349 (17)0.0292 (17)0.0333 (16)0.0034 (13)0.0063 (14)0.0086 (13)
O40.120 (2)0.0577 (16)0.0399 (14)0.0244 (15)0.0195 (15)−0.0019 (12)
C40.0276 (16)0.0265 (16)0.0308 (15)−0.0001 (12)0.0068 (13)0.0020 (12)
O50.0712 (17)0.0463 (14)0.0649 (15)0.0127 (12)0.0290 (14)−0.0101 (12)
C50.0316 (17)0.0332 (16)0.0256 (14)0.0006 (13)0.0071 (13)0.0050 (12)
O60.0340 (12)0.0325 (12)0.0412 (11)0.0042 (9)0.0086 (10)0.0091 (9)
C60.0339 (17)0.0299 (16)0.0324 (16)0.0017 (13)0.0022 (14)0.0080 (13)
O70.0512 (14)0.0371 (12)0.0403 (11)−0.0025 (10)0.0139 (11)−0.0028 (10)
C70.0418 (19)0.0323 (17)0.0476 (18)0.0070 (14)0.0039 (16)0.0034 (14)
O80.0357 (13)0.0330 (12)0.0749 (15)0.0017 (9)0.0107 (12)−0.0023 (11)
C80.079 (3)0.044 (2)0.0330 (16)0.0115 (17)0.0238 (17)0.0128 (14)
C90.0321 (16)0.0332 (16)0.0266 (14)0.0019 (13)0.0064 (13)0.0058 (12)
C100.0297 (16)0.0279 (16)0.0292 (15)−0.0016 (12)0.0101 (13)0.0048 (12)
C110.0279 (16)0.0285 (16)0.0285 (15)−0.0008 (12)0.0090 (13)0.0020 (12)
C120.0264 (16)0.0254 (15)0.0359 (16)0.0016 (12)0.0084 (13)0.0072 (13)
C130.0308 (17)0.0282 (16)0.0499 (18)0.0056 (13)0.0171 (15)0.0083 (14)
C140.047 (2)0.0292 (17)0.0381 (17)−0.0022 (14)0.0216 (16)0.0051 (14)
C150.0369 (18)0.0280 (16)0.0338 (16)−0.0013 (13)0.0102 (14)0.0045 (13)
C160.061 (2)0.0284 (18)0.055 (2)0.0008 (16)0.027 (2)0.0027 (17)
C170.115 (4)0.055 (2)0.088 (3)0.012 (2)0.059 (3)−0.022 (2)
C180.0301 (17)0.0334 (17)0.0472 (18)0.0090 (13)0.0123 (15)0.0106 (14)
C190.0228 (16)0.0320 (17)0.0370 (16)0.0043 (13)0.0029 (13)0.0111 (13)
C200.0371 (18)0.0314 (17)0.0349 (15)0.0086 (14)0.0095 (14)0.0065 (13)
C210.0398 (18)0.0298 (17)0.0351 (16)0.0089 (14)0.0039 (14)0.0010 (13)
C220.0271 (16)0.0317 (17)0.0341 (15)0.0049 (13)0.0011 (13)0.0062 (13)
C230.0349 (17)0.0405 (18)0.0302 (15)0.0078 (14)0.0069 (13)0.0080 (13)
C240.0312 (17)0.0320 (17)0.0310 (15)0.0037 (13)0.0016 (13)0.0025 (13)
C250.0323 (17)0.0338 (18)0.0459 (17)0.0051 (13)0.0080 (15)0.0032 (14)
C260.071 (3)0.050 (2)0.0486 (19)−0.0013 (18)0.0276 (19)−0.0092 (16)
O1—C41.366 (3)C9—H9B0.9900
O1—C91.418 (3)C10—C111.380 (3)
C1—C61.372 (3)C10—C151.388 (3)
C1—C21.393 (4)C11—C121.394 (4)
C1—C71.506 (4)C11—H110.9500
O2—C31.372 (3)C12—C131.383 (3)
O2—C81.437 (3)C12—C181.506 (4)
C2—C31.375 (4)C13—C141.393 (4)
C2—H20.9500C13—H130.9500
O3—C71.422 (3)C14—C151.387 (4)
O3—H30.8400C14—C161.495 (4)
C3—C41.409 (3)C15—H150.9500
O4—C161.193 (4)C17—H17A0.9800
C4—C51.380 (3)C17—H17B0.9800
O5—C161.339 (4)C17—H17C0.9800
O5—C171.462 (3)C18—H18A0.9900
C5—C61.391 (4)C18—H18B0.9900
C5—H50.9500C19—C201.368 (3)
O6—C191.379 (3)C19—C241.404 (3)
O6—C181.434 (3)C20—C211.402 (3)
C6—H60.9500C20—H200.9500
O7—C241.366 (3)C21—C221.374 (3)
O7—C261.427 (3)C21—H210.9500
C7—H7A0.9900C22—C231.401 (3)
C7—H7B0.9900C22—C251.509 (3)
O8—C251.413 (3)C23—C241.388 (4)
O8—H80.8400C23—H230.9500
C8—H8A0.9800C25—H25A0.9900
C8—H8B0.9800C25—H25B0.9900
C8—H8C0.9800C26—H26A0.9800
C9—C101.503 (4)C26—H26B0.9800
C9—H9A0.9900C26—H26C0.9800
C4—O1—C9117.7 (2)C12—C13—H13119.8
C6—C1—C2118.4 (2)C14—C13—H13119.8
C6—C1—C7121.0 (3)C15—C14—C13119.7 (3)
C2—C1—C7120.5 (2)C15—C14—C16117.7 (3)
C3—O2—C8116.9 (2)C13—C14—C16122.6 (3)
C3—C2—C1121.4 (2)C14—C15—C10120.3 (3)
C3—C2—H2119.3C14—C15—H15119.8
C1—C2—H2119.3C10—C15—H15119.8
C7—O3—H3109.5O4—C16—O5123.3 (3)
O2—C3—C2125.1 (2)O4—C16—C14125.1 (3)
O2—C3—C4115.4 (2)O5—C16—C14111.6 (3)
C2—C3—C4119.5 (3)O5—C17—H17A109.5
O1—C4—C5125.8 (2)O5—C17—H17B109.5
O1—C4—C3114.9 (2)H17A—C17—H17B109.5
C5—C4—C3119.3 (2)O5—C17—H17C109.5
C16—O5—C17112.9 (3)H17A—C17—H17C109.5
C4—C5—C6119.9 (2)H17B—C17—H17C109.5
C4—C5—H5120.0O6—C18—C12113.4 (2)
C6—C5—H5120.0O6—C18—H18A108.9
C19—O6—C18117.38 (19)C12—C18—H18A108.9
C1—C6—C5121.4 (3)O6—C18—H18B108.9
C1—C6—H6119.3C12—C18—H18B108.9
C5—C6—H6119.3H18A—C18—H18B107.7
C24—O7—C26116.3 (2)C20—C19—O6125.7 (2)
O3—C7—C1110.5 (2)C20—C19—C24119.6 (2)
O3—C7—H7A109.5O6—C19—C24114.6 (2)
C1—C7—H7A109.5C19—C20—C21121.0 (2)
O3—C7—H7B109.5C19—C20—H20119.5
C1—C7—H7B109.5C21—C20—H20119.5
H7A—C7—H7B108.1C22—C21—C20120.2 (2)
C25—O8—H8109.5C22—C21—H21119.9
O2—C8—H8A109.5C20—C21—H21119.9
O2—C8—H8B109.5C21—C22—C23118.7 (3)
H8A—C8—H8B109.5C21—C22—C25122.7 (2)
O2—C8—H8C109.5C23—C22—C25118.6 (2)
H8A—C8—H8C109.5C24—C23—C22121.4 (2)
H8B—C8—H8C109.5C24—C23—H23119.3
O1—C9—C10108.8 (2)C22—C23—H23119.3
O1—C9—H9A109.9O7—C24—C23124.9 (2)
C10—C9—H9A109.9O7—C24—C19116.1 (2)
O1—C9—H9B109.9C23—C24—C19119.0 (2)
C10—C9—H9B109.9O8—C25—C22111.7 (2)
H9A—C9—H9B108.3O8—C25—H25A109.3
C11—C10—C15119.4 (3)C22—C25—H25A109.3
C11—C10—C9121.0 (2)O8—C25—H25B109.3
C15—C10—C9119.5 (2)C22—C25—H25B109.3
C10—C11—C12121.0 (2)H25A—C25—H25B107.9
C10—C11—H11119.5O7—C26—H26A109.5
C12—C11—H11119.5O7—C26—H26B109.5
C13—C12—C11119.2 (2)H26A—C26—H26B109.5
C13—C12—C18120.6 (2)O7—C26—H26C109.5
C11—C12—C18120.1 (2)H26A—C26—H26C109.5
C12—C13—C14120.4 (3)H26B—C26—H26C109.5
C6—C1—C2—C30.5 (4)C16—C14—C15—C10178.8 (2)
C7—C1—C2—C3178.9 (3)C11—C10—C15—C14−1.8 (4)
C8—O2—C3—C217.4 (4)C9—C10—C15—C14175.6 (2)
C8—O2—C3—C4−161.8 (2)C17—O5—C16—O40.3 (4)
C1—C2—C3—O2−179.3 (2)C17—O5—C16—C14179.8 (2)
C1—C2—C3—C4−0.1 (4)C15—C14—C16—O4−5.0 (4)
C9—O1—C4—C5−6.5 (4)C13—C14—C16—O4173.5 (3)
C9—O1—C4—C3173.5 (2)C15—C14—C16—O5175.5 (2)
O2—C3—C4—O1−1.3 (3)C13—C14—C16—O5−6.0 (4)
C2—C3—C4—O1179.4 (2)C19—O6—C18—C1277.3 (3)
O2—C3—C4—C5178.7 (2)C13—C12—C18—O6−141.4 (2)
C2—C3—C4—C5−0.6 (4)C11—C12—C18—O642.5 (3)
O1—C4—C5—C6−179.1 (2)C18—O6—C19—C20−6.0 (4)
C3—C4—C5—C61.0 (4)C18—O6—C19—C24174.4 (2)
C2—C1—C6—C5−0.2 (4)O6—C19—C20—C21179.1 (3)
C7—C1—C6—C5−178.6 (2)C24—C19—C20—C21−1.3 (4)
C4—C5—C6—C1−0.5 (4)C19—C20—C21—C22−1.0 (4)
C6—C1—C7—O3−130.8 (3)C20—C21—C22—C232.2 (4)
C2—C1—C7—O350.8 (3)C20—C21—C22—C25−178.1 (3)
C4—O1—C9—C10177.9 (2)C21—C22—C23—C24−1.3 (4)
O1—C9—C10—C11−17.5 (3)C25—C22—C23—C24179.0 (3)
O1—C9—C10—C15165.2 (2)C26—O7—C24—C23−6.2 (4)
C15—C10—C11—C122.1 (4)C26—O7—C24—C19172.0 (3)
C9—C10—C11—C12−175.3 (2)C22—C23—C24—O7177.2 (2)
C10—C11—C12—C13−0.7 (4)C22—C23—C24—C19−0.9 (4)
C10—C11—C12—C18175.5 (2)C20—C19—C24—O7−176.1 (2)
C11—C12—C13—C14−0.9 (4)O6—C19—C24—O73.5 (3)
C18—C12—C13—C14−177.1 (2)C20—C19—C24—C232.2 (4)
C12—C13—C14—C151.1 (4)O6—C19—C24—C23−178.1 (2)
C12—C13—C14—C16−177.4 (2)C21—C22—C25—O816.9 (4)
C13—C14—C15—C100.2 (4)C23—C22—C25—O8−163.4 (2)
D—H···AD—HH···AD···AD—H···A
O3—H3···O8i0.841.902.731 (3)170
O8—H8···O3ii0.841.902.721 (3)167
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O8i0.841.902.731 (3)170
O8—H8⋯O3ii0.841.902.721 (3)167

Symmetry codes: (i) ; (ii) .

  5 in total

1.  Isolation and structure of an "imploded" cryptophane.

Authors:  Scott T Mough; John C Goeltz; K Travis Holman
Journal:  Angew Chem Int Ed Engl       Date:  2004-10-25       Impact factor: 15.336

2.  A soft coordination polymer derived from container molecule ligands.

Authors:  Scott T Mough; K Travis Holman
Journal:  Chem Commun (Camb)       Date:  2008-02-19       Impact factor: 6.222

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Cryptophanes and their complexes--present and future.

Authors:  Thierry Brotin; Jean-Pierre Dutasta
Journal:  Chem Rev       Date:  2009-01       Impact factor: 60.622

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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