| Literature DB >> 21580415 |
Abstract
In the crystal of the title compound, C(8)H(8)NO(4) (+)·NO(3) (-)·2H(2)O, the 5-ammonio-isophthalic acid cations, the nitrate anions and the water mol-ecules are linked by N-H⋯O, O-H⋯O and C-H ⋯O hydrogen bonds into a three-dimensional network. The structure is further stabilized by aromatic π-π stacking inter-actions, with centroid-centroid separations of 3.827 (2) Å.Entities:
Year: 2010 PMID: 21580415 PMCID: PMC2983508 DOI: 10.1107/S1600536810005362
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H8NO4+·NO3−·2H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1753 reflections |
| θ = 3.1–27.5° | |
| µ = 0.14 mm−1 | |
| β = 97.31 (3)° | Prism, colourless |
| 0.35 × 0.25 × 0.10 mm | |
| Rigaku SCXmini diffractometer | 2753 independent reflections |
| Radiation source: fine-focus sealed tube | 1905 reflections with |
| graphite | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 3.2° |
| CCD profile fitting scans | |
| Absorption correction: multi-scan ( | |
| 12169 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.28 e Å−3 | |
| 2753 reflections | Δρmin = −0.24 e Å−3 |
| 190 parameters | Extinction correction: |
| 0 restraints | Extinction coefficient: 0.0014 (1) |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| O4 | 0.4952 (2) | 0.14675 (19) | 0.42859 (10) | 0.0442 (5) | |
| H4 | 0.5275 | 0.0603 | 0.4432 | 0.066* | |
| N1 | 0.3108 (2) | 0.6452 (2) | 0.29415 (11) | 0.0328 (5) | |
| H1A | 0.3651 | 0.5813 | 0.2658 | 0.049* | |
| H1B | 0.3632 | 0.7350 | 0.3010 | 0.049* | |
| H1C | 0.2126 | 0.6614 | 0.2682 | 0.049* | |
| C2 | 0.3575 (3) | 0.4279 (2) | 0.38793 (13) | 0.0280 (5) | |
| H2 | 0.4070 | 0.3744 | 0.3498 | 0.034* | |
| O1 | 0.1136 (3) | 0.6025 (2) | 0.62566 (11) | 0.0545 (6) | |
| H1 | 0.0669 | 0.6559 | 0.6558 | 0.082* | |
| O3 | 0.3885 (3) | 0.1368 (2) | 0.54276 (11) | 0.0513 (5) | |
| C4 | 0.2667 (3) | 0.4405 (2) | 0.51780 (13) | 0.0296 (5) | |
| H4A | 0.2556 | 0.3946 | 0.5667 | 0.036* | |
| C1 | 0.2969 (3) | 0.5756 (2) | 0.37216 (13) | 0.0264 (5) | |
| C5 | 0.2069 (3) | 0.5891 (3) | 0.50071 (14) | 0.0299 (5) | |
| C6 | 0.2225 (3) | 0.6570 (2) | 0.42699 (13) | 0.0300 (5) | |
| H6 | 0.1830 | 0.7563 | 0.4152 | 0.036* | |
| O2 | 0.0772 (3) | 0.8101 (2) | 0.54705 (12) | 0.0605 (6) | |
| C3 | 0.3432 (3) | 0.3610 (2) | 0.46132 (13) | 0.0275 (5) | |
| C7 | 0.1260 (3) | 0.6799 (3) | 0.55994 (14) | 0.0356 (6) | |
| O5 | 0.2218 (2) | −0.0029 (2) | 0.30373 (12) | 0.0461 (5) | |
| O6 | 0.4607 (2) | −0.06093 (19) | 0.27628 (11) | 0.0441 (5) | |
| O7 | 0.3495 (2) | 0.15470 (19) | 0.23390 (12) | 0.0460 (5) | |
| N2 | 0.3433 (2) | 0.0312 (2) | 0.27105 (12) | 0.0333 (5) | |
| C8 | 0.4106 (3) | 0.2034 (3) | 0.47971 (13) | 0.0304 (5) | |
| O9 | 0.9920 (2) | 0.7569 (2) | 0.73715 (12) | 0.0422 (5) | |
| O8 | 0.8512 (3) | 0.5594 (3) | 0.84014 (16) | 0.0667 (7) | |
| H9A | 0.916 (5) | 0.828 (5) | 0.729 (2) | 0.091 (13)* | |
| H8A | 0.904 (4) | 0.500 (5) | 0.885 (2) | 0.089 (13)* | |
| H8B | 0.781 (6) | 0.612 (5) | 0.861 (3) | 0.111 (16)* | |
| H9B | 0.949 (6) | 0.706 (6) | 0.771 (3) | 0.14 (2)* |
| O4 | 0.0653 (12) | 0.0295 (9) | 0.0394 (10) | 0.0196 (9) | 0.0133 (9) | 0.0042 (7) |
| N1 | 0.0348 (11) | 0.0289 (10) | 0.0359 (11) | 0.0043 (8) | 0.0092 (9) | 0.0069 (8) |
| C2 | 0.0321 (12) | 0.0225 (11) | 0.0299 (12) | 0.0021 (9) | 0.0057 (10) | −0.0010 (9) |
| O1 | 0.0824 (15) | 0.0496 (11) | 0.0354 (10) | 0.0243 (10) | 0.0225 (10) | 0.0014 (9) |
| O3 | 0.0760 (14) | 0.0357 (10) | 0.0470 (11) | 0.0214 (10) | 0.0261 (10) | 0.0177 (8) |
| C4 | 0.0365 (13) | 0.0251 (11) | 0.0269 (12) | 0.0028 (9) | 0.0025 (10) | 0.0010 (9) |
| C1 | 0.0283 (11) | 0.0236 (11) | 0.0275 (11) | −0.0002 (9) | 0.0038 (9) | 0.0026 (9) |
| C5 | 0.0323 (12) | 0.0258 (11) | 0.0313 (12) | 0.0017 (9) | 0.0029 (10) | −0.0025 (9) |
| C6 | 0.0345 (12) | 0.0204 (10) | 0.0348 (12) | 0.0054 (9) | 0.0027 (10) | 0.0003 (9) |
| O2 | 0.0920 (16) | 0.0371 (11) | 0.0573 (13) | 0.0270 (11) | 0.0282 (12) | 0.0011 (9) |
| C3 | 0.0317 (12) | 0.0209 (10) | 0.0293 (12) | 0.0016 (9) | 0.0021 (9) | 0.0008 (9) |
| C7 | 0.0421 (14) | 0.0308 (13) | 0.0343 (13) | 0.0059 (11) | 0.0063 (11) | −0.0055 (10) |
| O5 | 0.0385 (10) | 0.0427 (10) | 0.0604 (12) | −0.0026 (8) | 0.0199 (9) | 0.0066 (9) |
| O6 | 0.0436 (10) | 0.0346 (9) | 0.0562 (12) | 0.0130 (8) | 0.0149 (9) | 0.0030 (8) |
| O7 | 0.0483 (11) | 0.0269 (9) | 0.0643 (12) | −0.0019 (8) | 0.0128 (9) | 0.0126 (8) |
| N2 | 0.0363 (11) | 0.0263 (10) | 0.0377 (11) | −0.0009 (9) | 0.0063 (9) | −0.0016 (8) |
| C8 | 0.0379 (13) | 0.0246 (11) | 0.0290 (12) | 0.0042 (10) | 0.0049 (10) | −0.0001 (9) |
| O9 | 0.0356 (10) | 0.0465 (11) | 0.0460 (11) | 0.0073 (9) | 0.0106 (9) | −0.0011 (9) |
| O8 | 0.0748 (16) | 0.0582 (14) | 0.0742 (17) | 0.0179 (12) | 0.0371 (14) | 0.0138 (12) |
| O4—C8 | 1.279 (3) | C4—H4A | 0.9300 |
| O4—H4 | 0.8200 | C1—C6 | 1.371 (3) |
| N1—C1 | 1.464 (3) | C5—C6 | 1.395 (3) |
| N1—H1A | 0.8900 | C5—C7 | 1.496 (3) |
| N1—H1B | 0.8900 | C6—H6 | 0.9300 |
| N1—H1C | 0.8900 | O2—C7 | 1.205 (3) |
| C2—C1 | 1.383 (3) | C3—C8 | 1.488 (3) |
| C2—C3 | 1.384 (3) | O5—N2 | 1.249 (2) |
| C2—H2 | 0.9300 | O6—N2 | 1.256 (2) |
| O1—C7 | 1.309 (3) | O7—N2 | 1.240 (2) |
| O1—H1 | 0.8200 | O9—H9A | 0.88 (4) |
| O3—C8 | 1.243 (3) | O9—H9B | 0.84 (5) |
| C4—C5 | 1.392 (3) | O8—H8A | 0.97 (4) |
| C4—C3 | 1.393 (3) | O8—H8B | 0.85 (5) |
| C8—O4—H4 | 109.5 | C6—C5—C7 | 118.5 (2) |
| C1—N1—H1A | 109.5 | C1—C6—C5 | 119.2 (2) |
| C1—N1—H1B | 109.5 | C1—C6—H6 | 120.4 |
| H1A—N1—H1B | 109.5 | C5—C6—H6 | 120.4 |
| C1—N1—H1C | 109.5 | C2—C3—C4 | 120.3 (2) |
| H1A—N1—H1C | 109.5 | C2—C3—C8 | 119.59 (19) |
| H1B—N1—H1C | 109.5 | C4—C3—C8 | 120.1 (2) |
| C1—C2—C3 | 119.0 (2) | O2—C7—O1 | 124.5 (2) |
| C1—C2—H2 | 120.5 | O2—C7—C5 | 122.6 (2) |
| C3—C2—H2 | 120.5 | O1—C7—C5 | 112.9 (2) |
| C7—O1—H1 | 109.5 | O7—N2—O5 | 120.9 (2) |
| C5—C4—C3 | 119.7 (2) | O7—N2—O6 | 119.8 (2) |
| C5—C4—H4A | 120.2 | O5—N2—O6 | 119.32 (19) |
| C3—C4—H4A | 120.2 | O3—C8—O4 | 123.7 (2) |
| C6—C1—C2 | 121.8 (2) | O3—C8—C3 | 120.5 (2) |
| C6—C1—N1 | 119.39 (19) | O4—C8—C3 | 115.8 (2) |
| C2—C1—N1 | 118.78 (19) | H9A—O9—H9B | 96 (4) |
| C4—C5—C6 | 119.9 (2) | H8A—O8—H8B | 103 (4) |
| C4—C5—C7 | 121.6 (2) |
| H··· | ||||
| C2—H2···O6i | 0.93 | 2.58 | 3.324 (3) | 138 |
| O9—H9A···O7ii | 0.88 (4) | 2.39 (4) | 3.048 (3) | 133 (3) |
| O9—H9A···O5ii | 0.88 (4) | 1.94 (4) | 2.801 (3) | 168 (4) |
| O8—H8B···O3iii | 0.85 (5) | 2.29 (5) | 3.057 (3) | 149 (4) |
| O8—H8A···O2iv | 0.97 (4) | 2.00 (4) | 2.882 (3) | 151 (3) |
| O4—H4···O3v | 0.82 | 1.84 | 2.652 (2) | 169 |
| N1—H1C···O9vi | 0.89 | 1.98 | 2.839 (3) | 163 |
| N1—H1B···O6vii | 0.89 | 2.00 | 2.859 (3) | 161 |
| N1—H1B···O5vii | 0.89 | 2.55 | 3.134 (3) | 124 |
| O9—H9B···O8 | 0.84 (5) | 1.96 (5) | 2.796 (3) | 171 (5) |
| N1—H1A···O7i | 0.89 | 2.46 | 2.933 (3) | 114 |
| N1—H1A···O6i | 0.89 | 2.09 | 2.963 (3) | 165 |
| O1—H1···O9viii | 0.82 | 1.80 | 2.611 (3) | 169 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C2—H2⋯O6i | 0.93 | 2.58 | 3.324 (3) | 138 |
| O9—H9 | 0.88 (4) | 2.39 (4) | 3.048 (3) | 133 (3) |
| O9—H9 | 0.88 (4) | 1.94 (4) | 2.801 (3) | 168 (4) |
| O8—H8 | 0.85 (5) | 2.29 (5) | 3.057 (3) | 149 (4) |
| O8—H8 | 0.97 (4) | 2.00 (4) | 2.882 (3) | 151 (3) |
| O4—H4⋯O3v | 0.82 | 1.84 | 2.652 (2) | 169 |
| N1—H1 | 0.89 | 1.98 | 2.839 (3) | 163 |
| N1—H1 | 0.89 | 2.00 | 2.859 (3) | 161 |
| N1—H1 | 0.89 | 2.55 | 3.134 (3) | 124 |
| O9—H9 | 0.84 (5) | 1.96 (5) | 2.796 (3) | 171 (5) |
| N1—H1 | 0.89 | 2.46 | 2.933 (3) | 114 |
| N1—H1 | 0.89 | 2.09 | 2.963 (3) | 165 |
| O1—H1⋯O9viii | 0.82 | 1.80 | 2.611 (3) | 169 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .