| Literature DB >> 21580390 |
Fang Miao, Bao-Fu Qin, Li-Zhen Yang, Xin-Juan Yang, Le Zhou.
Abstract
The title compound, C(10)H(11)NO(4), was extracted from a culture broth of Penicillium verruculosum YL-52. The mol-ecular structure is essentially planar, with an r.m.s. deviation of 0.01342 (2) Å for the non-H atoms. In the crystal structure, adjacent mol-ecules are connected into a centrosymmetric dimer through a pair of O-H⋯O hydrogen bonds. The dimers are further extended into a chain by weak C-H⋯O hydrogen bonds.Entities:
Year: 2010 PMID: 21580390 PMCID: PMC2983691 DOI: 10.1107/S1600536810005040
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H11NO4 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 773 reflections | |
| θ = 0.00–0.00° | |
| µ = 0.11 mm−1 | |
| α = 93.009 (3)° | |
| β = 101.247 (2)° | Block, colourless |
| γ = 90.410 (3)° | 0.33 × 0.12 × 0.08 mm |
| Bruker APEXII CCD diffractometer | 1849 independent reflections |
| Radiation source: fine-focus sealed tube | 1255 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.5°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 3845 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1849 reflections | (Δ/σ)max < 0.001 |
| 139 parameters | Δρmax = 0.17 e Å−3 |
| 0 restraints | Δρmin = −0.19 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| O2 | 1.2795 (3) | 0.5891 (2) | 0.92347 (15) | 0.0617 (5) | |
| O1 | 1.5542 (3) | 0.5091 (3) | 0.83867 (17) | 0.0664 (5) | |
| H1 | 1.5982 | 0.4818 | 0.9142 | 0.100* | |
| N1 | 0.9689 (2) | 0.7432 (2) | 0.55825 (16) | 0.0375 (4) | |
| O4 | 0.6865 (2) | 0.8327 (2) | 0.64451 (17) | 0.0611 (5) | |
| O3 | 1.2017 (2) | 0.6881 (2) | 0.42194 (15) | 0.0555 (5) | |
| C4 | 1.0334 (3) | 0.7417 (3) | 0.4361 (2) | 0.0372 (5) | |
| C3 | 1.0819 (3) | 0.6860 (3) | 0.6763 (2) | 0.0403 (5) | |
| H3 | 1.0143 | 0.6904 | 0.7472 | 0.048* | |
| C5 | 0.8620 (3) | 0.8155 (3) | 0.3422 (2) | 0.0382 (5) | |
| C8 | 0.8650 (3) | 0.8428 (3) | 0.2160 (2) | 0.0445 (6) | |
| C2 | 1.2744 (3) | 0.6264 (3) | 0.6983 (2) | 0.0437 (6) | |
| H2 | 1.3491 | 0.6184 | 0.6309 | 0.052* | |
| C1 | 1.3693 (3) | 0.5730 (3) | 0.8297 (2) | 0.0441 (6) | |
| C6 | 0.6859 (3) | 0.8529 (3) | 0.4118 (2) | 0.0458 (6) | |
| H6A | 0.6463 | 0.9765 | 0.4060 | 0.055* | |
| H6B | 0.5654 | 0.7782 | 0.3743 | 0.055* | |
| C7 | 0.7675 (3) | 0.8117 (3) | 0.5505 (2) | 0.0433 (5) | |
| C10 | 0.6796 (4) | 0.9171 (3) | 0.1284 (2) | 0.0580 (7) | |
| H10A | 0.5714 | 0.9396 | 0.1773 | 0.087* | |
| H10B | 0.6294 | 0.8331 | 0.0563 | 0.087* | |
| H10C | 0.7192 | 1.0262 | 0.0953 | 0.087* | |
| C9 | 1.0460 (4) | 0.8041 (4) | 0.1519 (3) | 0.0675 (8) | |
| H9A | 1.1076 | 0.9138 | 0.1338 | 0.101* | |
| H9B | 0.9992 | 0.7347 | 0.0713 | 0.101* | |
| H9C | 1.1476 | 0.7388 | 0.2093 | 0.101* |
| O2 | 0.0608 (11) | 0.0854 (13) | 0.0385 (10) | 0.0281 (9) | 0.0066 (8) | 0.0098 (8) |
| O1 | 0.0544 (11) | 0.0958 (14) | 0.0481 (10) | 0.0294 (10) | 0.0024 (8) | 0.0214 (10) |
| N1 | 0.0320 (9) | 0.0440 (10) | 0.0355 (10) | 0.0051 (8) | 0.0029 (8) | 0.0055 (8) |
| O4 | 0.0491 (10) | 0.0836 (12) | 0.0550 (11) | 0.0187 (9) | 0.0177 (9) | 0.0121 (9) |
| O3 | 0.0375 (9) | 0.0838 (12) | 0.0452 (9) | 0.0178 (8) | 0.0060 (7) | 0.0105 (8) |
| C4 | 0.0296 (11) | 0.0413 (12) | 0.0396 (12) | 0.0026 (9) | 0.0032 (9) | 0.0046 (9) |
| C3 | 0.0427 (13) | 0.0417 (12) | 0.0348 (12) | 0.0027 (10) | 0.0024 (10) | 0.0065 (9) |
| C5 | 0.0328 (11) | 0.0386 (12) | 0.0413 (13) | 0.0022 (9) | 0.0014 (9) | 0.0054 (9) |
| C8 | 0.0448 (13) | 0.0447 (13) | 0.0414 (13) | 0.0022 (10) | 0.0009 (10) | 0.0051 (10) |
| C2 | 0.0446 (14) | 0.0478 (13) | 0.0373 (12) | 0.0043 (11) | 0.0027 (10) | 0.0072 (10) |
| C1 | 0.0426 (13) | 0.0442 (13) | 0.0425 (13) | 0.0081 (10) | 0.0005 (11) | 0.0045 (10) |
| C6 | 0.0360 (12) | 0.0521 (13) | 0.0480 (14) | 0.0092 (10) | 0.0033 (10) | 0.0093 (11) |
| C7 | 0.0364 (12) | 0.0478 (13) | 0.0465 (14) | 0.0048 (10) | 0.0094 (11) | 0.0055 (10) |
| C10 | 0.0571 (16) | 0.0625 (16) | 0.0484 (15) | 0.0082 (12) | −0.0073 (12) | 0.0138 (12) |
| C9 | 0.0633 (17) | 0.093 (2) | 0.0487 (15) | 0.0124 (15) | 0.0150 (13) | 0.0130 (14) |
| O2—C1 | 1.234 (3) | C8—C9 | 1.491 (3) |
| O1—C1 | 1.293 (3) | C8—C10 | 1.499 (3) |
| O1—H1 | 0.8200 | C2—C1 | 1.465 (3) |
| N1—C3 | 1.395 (3) | C2—H2 | 0.9300 |
| N1—C7 | 1.407 (3) | C6—C7 | 1.488 (3) |
| N1—C4 | 1.415 (3) | C6—H6A | 0.9700 |
| O4—C7 | 1.203 (3) | C6—H6B | 0.9700 |
| O3—C4 | 1.207 (2) | C10—H10A | 0.9600 |
| C4—C5 | 1.469 (3) | C10—H10B | 0.9600 |
| C3—C2 | 1.321 (3) | C10—H10C | 0.9600 |
| C3—H3 | 0.9300 | C9—H9A | 0.9600 |
| C5—C8 | 1.343 (3) | C9—H9B | 0.9600 |
| C5—C6 | 1.496 (3) | C9—H9C | 0.9600 |
| C1—O1—H1 | 109.5 | C7—C6—C5 | 105.09 (17) |
| C3—N1—C7 | 120.90 (18) | C7—C6—H6A | 110.7 |
| C3—N1—C4 | 127.07 (17) | C5—C6—H6A | 110.7 |
| C7—N1—C4 | 112.03 (17) | C7—C6—H6B | 110.7 |
| O3—C4—N1 | 122.39 (18) | C5—C6—H6B | 110.7 |
| O3—C4—C5 | 130.8 (2) | H6A—C6—H6B | 108.8 |
| N1—C4—C5 | 106.80 (17) | O4—C7—N1 | 122.9 (2) |
| C2—C3—N1 | 127.1 (2) | O4—C7—C6 | 129.1 (2) |
| C2—C3—H3 | 116.5 | N1—C7—C6 | 107.93 (18) |
| N1—C3—H3 | 116.5 | C8—C10—H10A | 109.5 |
| C8—C5—C4 | 125.4 (2) | C8—C10—H10B | 109.5 |
| C8—C5—C6 | 126.63 (19) | H10A—C10—H10B | 109.5 |
| C4—C5—C6 | 107.97 (18) | C8—C10—H10C | 109.5 |
| C5—C8—C9 | 124.3 (2) | H10A—C10—H10C | 109.5 |
| C5—C8—C10 | 120.9 (2) | H10B—C10—H10C | 109.5 |
| C9—C8—C10 | 114.8 (2) | C8—C9—H9A | 109.5 |
| C3—C2—C1 | 119.5 (2) | C8—C9—H9B | 109.5 |
| C3—C2—H2 | 120.2 | H9A—C9—H9B | 109.5 |
| C1—C2—H2 | 120.2 | C8—C9—H9C | 109.5 |
| O2—C1—O1 | 123.3 (2) | H9A—C9—H9C | 109.5 |
| O2—C1—C2 | 122.4 (2) | H9B—C9—H9C | 109.5 |
| O1—C1—C2 | 114.3 (2) | ||
| C3—N1—C4—O3 | −0.1 (3) | C6—C5—C8—C10 | −0.4 (3) |
| C7—N1—C4—O3 | 179.89 (19) | N1—C3—C2—C1 | 179.57 (19) |
| C3—N1—C4—C5 | −179.71 (17) | C3—C2—C1—O2 | −3.5 (3) |
| C7—N1—C4—C5 | 0.3 (2) | C3—C2—C1—O1 | 177.0 (2) |
| C7—N1—C3—C2 | −176.9 (2) | C8—C5—C6—C7 | −176.1 (2) |
| C4—N1—C3—C2 | 3.1 (3) | C4—C5—C6—C7 | 4.3 (2) |
| O3—C4—C5—C8 | −2.1 (4) | C3—N1—C7—O4 | 3.7 (3) |
| N1—C4—C5—C8 | 177.4 (2) | C4—N1—C7—O4 | −176.4 (2) |
| O3—C4—C5—C6 | 177.6 (2) | C3—N1—C7—C6 | −177.54 (18) |
| N1—C4—C5—C6 | −2.9 (2) | C4—N1—C7—C6 | 2.4 (2) |
| C4—C5—C8—C9 | −0.8 (4) | C5—C6—C7—O4 | 174.6 (2) |
| C6—C5—C8—C9 | 179.6 (2) | C5—C6—C7—N1 | −4.1 (2) |
| C4—C5—C8—C10 | 179.3 (2) |
| H··· | ||||
| O1—H1···O2i | 0.82 | 1.83 | 2.647 (2) | 174 |
| C6—H6A···O4ii | 0.97 | 2.60 | 3.399 (3) | 140 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯O2i | 0.82 | 1.83 | 2.647 (2) | 174 |
| C6—H6 | 0.97 | 2.60 | 3.399 (3) | 140 |
Symmetry codes: (i) ; (ii) .