| Literature DB >> 21580368 |
Abstract
The crystal structure of the title compound, C(9)H(9)N(2) (+)·H(2)PO(4) (-)·H(3)PO(4), is stabilized by N-H⋯O and O-H⋯O hydrogen-bonding inter-actions, resulting in a two-dimensional network.Entities:
Year: 2010 PMID: 21580368 PMCID: PMC2983698 DOI: 10.1107/S1600536810004927
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H9N2+·H2PO4−·H3PO4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2893 reflections |
| θ = 2.3–26.4° | |
| µ = 0.35 mm−1 | |
| β = 99.767 (7)° | Block, colorless |
| 0.25 × 0.22 × 0.20 mm | |
| Oxford Diffraction Gemini R Ultra diffractometer | 2893 independent reflections |
| Radiation source: fine-focus sealed tube | 1549 reflections with |
| graphite | |
| Detector resolution: 10.0 pixels mm-1 | θmax = 26.4°, θmin = 2.3° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 5555 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2893 reflections | (Δ/σ)max < 0.001 |
| 190 parameters | Δρmax = 0.27 e Å−3 |
| 0 restraints | Δρmin = −0.37 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| P1 | 0.21882 (4) | −0.03732 (14) | 0.43687 (4) | 0.0302 (2) | |
| P2 | 0.42236 (4) | 0.04439 (15) | 0.89806 (4) | 0.0299 (2) | |
| O4 | 0.35030 (10) | −0.0447 (4) | 0.84416 (10) | 0.0393 (5) | |
| O5 | 0.28575 (10) | 0.0703 (4) | 0.50061 (9) | 0.0381 (5) | |
| H5A | 0.3047 | 0.2162 | 0.4864 | 0.057* | |
| O3 | 0.48015 (11) | −0.2115 (3) | 0.91299 (11) | 0.0381 (5) | |
| H3A | 0.5199 | −0.1635 | 0.9425 | 0.057* | |
| O6 | 0.18630 (11) | −0.3002 (3) | 0.46455 (11) | 0.0388 (5) | |
| O2 | 0.40773 (10) | 0.1605 (4) | 0.97411 (10) | 0.0380 (5) | |
| O7 | 0.25178 (11) | −0.0717 (4) | 0.36199 (10) | 0.0428 (5) | |
| H7 | 0.2877 | −0.1882 | 0.3682 | 0.064* | |
| O1 | 0.46827 (11) | 0.2710 (4) | 0.85825 (11) | 0.0399 (5) | |
| H1 | 0.4399 | 0.4091 | 0.8466 | 0.060* | |
| O8 | 0.15458 (10) | 0.1928 (4) | 0.41974 (11) | 0.0405 (5) | |
| H8A | 0.1738 | 0.3365 | 0.4045 | 0.061* | |
| N2 | 0.26383 (14) | 0.5520 (5) | 0.61475 (12) | 0.0382 (6) | |
| H2 | 0.2309 | 0.6152 | 0.5765 | 0.046* | |
| N1 | 0.31292 (13) | 0.3278 (5) | 0.71534 (12) | 0.0395 (6) | |
| H1B | 0.3176 | 0.2181 | 0.7545 | 0.047* | |
| C5 | 0.16191 (18) | 0.0460 (7) | 0.72484 (19) | 0.0548 (9) | |
| H5 | 0.2037 | 0.0178 | 0.7649 | 0.066* | |
| C8 | 0.37239 (17) | 0.4892 (6) | 0.69554 (17) | 0.0443 (8) | |
| H8 | 0.4242 | 0.4991 | 0.7212 | 0.053* | |
| C6 | 0.17162 (16) | 0.2248 (6) | 0.66598 (16) | 0.0361 (7) | |
| C3 | 0.0300 (2) | −0.0510 (8) | 0.6673 (2) | 0.0657 (10) | |
| H3 | −0.0174 | −0.1454 | 0.6676 | 0.079* | |
| C9 | 0.34158 (17) | 0.6299 (6) | 0.63224 (17) | 0.0429 (8) | |
| H9 | 0.3679 | 0.7565 | 0.6052 | 0.051* | |
| C2 | 0.03804 (19) | 0.1260 (9) | 0.6094 (2) | 0.0719 (11) | |
| H2A | −0.0043 | 0.1531 | 0.5699 | 0.086* | |
| C7 | 0.24664 (16) | 0.3649 (6) | 0.66528 (15) | 0.0332 (7) | |
| C1 | 0.10825 (19) | 0.2679 (8) | 0.60773 (18) | 0.0604 (10) | |
| H1A | 0.1128 | 0.3911 | 0.5678 | 0.072* | |
| C4 | 0.0923 (2) | −0.0905 (8) | 0.7256 (2) | 0.0691 (10) | |
| H4 | 0.0870 | −0.2109 | 0.7658 | 0.083* |
| P1 | 0.0327 (4) | 0.0264 (4) | 0.0305 (4) | −0.0009 (3) | 0.0027 (3) | −0.0005 (3) |
| P2 | 0.0291 (4) | 0.0297 (4) | 0.0301 (4) | 0.0019 (3) | 0.0027 (3) | 0.0022 (3) |
| O4 | 0.0320 (10) | 0.0512 (12) | 0.0313 (11) | −0.0061 (9) | −0.0042 (9) | 0.0072 (9) |
| O5 | 0.0402 (11) | 0.0425 (11) | 0.0293 (11) | −0.0111 (9) | −0.0012 (9) | 0.0036 (9) |
| O3 | 0.0348 (11) | 0.0290 (10) | 0.0457 (13) | 0.0045 (8) | −0.0063 (9) | −0.0022 (9) |
| O6 | 0.0451 (12) | 0.0271 (10) | 0.0430 (13) | −0.0067 (9) | 0.0036 (10) | −0.0010 (9) |
| O2 | 0.0331 (11) | 0.0520 (12) | 0.0283 (11) | 0.0102 (9) | 0.0033 (9) | −0.0007 (9) |
| O7 | 0.0525 (13) | 0.0445 (12) | 0.0315 (12) | 0.0114 (10) | 0.0077 (9) | 0.0030 (9) |
| O1 | 0.0448 (12) | 0.0311 (10) | 0.0461 (13) | 0.0029 (9) | 0.0136 (10) | 0.0066 (9) |
| O8 | 0.0350 (12) | 0.0289 (10) | 0.0547 (15) | 0.0002 (9) | −0.0011 (10) | −0.0008 (9) |
| N2 | 0.0431 (15) | 0.0443 (14) | 0.0263 (14) | 0.0063 (12) | 0.0031 (11) | 0.0070 (12) |
| N1 | 0.0407 (16) | 0.0522 (15) | 0.0246 (14) | −0.0007 (12) | 0.0023 (12) | 0.0090 (11) |
| C5 | 0.0418 (19) | 0.065 (2) | 0.054 (2) | −0.0073 (17) | −0.0042 (16) | 0.0145 (18) |
| C8 | 0.0353 (17) | 0.061 (2) | 0.0354 (18) | −0.0041 (15) | 0.0028 (14) | 0.0083 (16) |
| C6 | 0.0346 (18) | 0.0438 (17) | 0.0296 (19) | 0.0066 (14) | 0.0049 (14) | −0.0059 (14) |
| C3 | 0.042 (2) | 0.079 (3) | 0.077 (3) | −0.0129 (19) | 0.013 (2) | −0.012 (2) |
| C9 | 0.0433 (19) | 0.0520 (19) | 0.0337 (19) | −0.0065 (16) | 0.0073 (15) | 0.0051 (15) |
| C2 | 0.041 (2) | 0.117 (3) | 0.051 (3) | −0.001 (2) | −0.0093 (18) | −0.004 (2) |
| C7 | 0.0368 (17) | 0.0394 (16) | 0.0234 (16) | 0.0082 (14) | 0.0052 (14) | −0.0019 (13) |
| C1 | 0.041 (2) | 0.097 (3) | 0.039 (2) | −0.0023 (18) | −0.0026 (17) | 0.0111 (18) |
| C4 | 0.051 (2) | 0.081 (3) | 0.074 (3) | −0.0155 (19) | 0.007 (2) | 0.018 (2) |
| P1—O6 | 1.4790 (18) | N1—C8 | 1.368 (3) |
| P1—O7 | 1.5400 (19) | N1—H1B | 0.8600 |
| P1—O8 | 1.5421 (18) | C5—C4 | 1.361 (4) |
| P1—O5 | 1.5559 (17) | C5—C6 | 1.376 (4) |
| P2—O4 | 1.4916 (18) | C5—H5 | 0.9300 |
| P2—O2 | 1.5175 (19) | C8—C9 | 1.335 (4) |
| P2—O3 | 1.5579 (18) | C8—H8 | 0.9300 |
| P2—O1 | 1.568 (2) | C6—C1 | 1.384 (4) |
| O5—H5A | 0.8200 | C6—C7 | 1.451 (4) |
| O3—H3A | 0.8200 | C3—C2 | 1.350 (5) |
| O7—H7 | 0.8200 | C3—C4 | 1.370 (4) |
| O1—H1 | 0.8200 | C3—H3 | 0.9300 |
| O8—H8A | 0.8200 | C9—H9 | 0.9300 |
| N2—C7 | 1.328 (3) | C2—C1 | 1.385 (5) |
| N2—C9 | 1.370 (3) | C2—H2A | 0.9300 |
| N2—H2 | 0.8600 | C1—H1A | 0.9300 |
| N1—C7 | 1.332 (3) | C4—H4 | 0.9300 |
| O6—P1—O7 | 114.43 (11) | C6—C5—H5 | 119.4 |
| O6—P1—O8 | 111.01 (11) | C9—C8—N1 | 106.7 (3) |
| O7—P1—O8 | 105.07 (11) | C9—C8—H8 | 126.7 |
| O6—P1—O5 | 107.86 (10) | N1—C8—H8 | 126.7 |
| O7—P1—O5 | 109.12 (10) | C5—C6—C1 | 118.5 (3) |
| O8—P1—O5 | 109.25 (10) | C5—C6—C7 | 120.6 (3) |
| O4—P2—O2 | 115.35 (11) | C1—C6—C7 | 120.9 (3) |
| O4—P2—O3 | 109.06 (11) | C2—C3—C4 | 119.5 (3) |
| O2—P2—O3 | 109.01 (10) | C2—C3—H3 | 120.3 |
| O4—P2—O1 | 109.26 (11) | C4—C3—H3 | 120.3 |
| O2—P2—O1 | 109.08 (11) | C8—C9—N2 | 106.8 (3) |
| O3—P2—O1 | 104.53 (11) | C8—C9—H9 | 126.6 |
| P1—O5—H5A | 109.5 | N2—C9—H9 | 126.6 |
| P2—O3—H3A | 109.5 | C3—C2—C1 | 121.2 (3) |
| P1—O7—H7 | 109.5 | C3—C2—H2A | 119.4 |
| P2—O1—H1 | 109.5 | C1—C2—H2A | 119.4 |
| P1—O8—H8A | 109.5 | N2—C7—N1 | 106.0 (2) |
| C7—N2—C9 | 110.2 (2) | N2—C7—C6 | 127.5 (2) |
| C7—N2—H2 | 124.9 | N1—C7—C6 | 126.5 (3) |
| C9—N2—H2 | 124.9 | C6—C1—C2 | 119.4 (3) |
| C7—N1—C8 | 110.3 (2) | C6—C1—H1A | 120.3 |
| C7—N1—H1B | 124.9 | C2—C1—H1A | 120.3 |
| C8—N1—H1B | 124.9 | C5—C4—C3 | 120.3 (3) |
| C4—C5—C6 | 121.2 (3) | C5—C4—H4 | 119.9 |
| C4—C5—H5 | 119.4 | C3—C4—H4 | 119.9 |
| H··· | ||||
| O5—H5A···O2i | 0.82 | 1.91 | 2.563 (2) | 136 |
| O3—H3A···O2ii | 0.82 | 1.76 | 2.546 (2) | 159 |
| O8—H8A···O6iii | 0.82 | 2.01 | 2.553 (2) | 123 |
| N2—H2···O6iii | 0.86 | 2.05 | 2.859 (3) | 157 |
| N1—H1B···O4 | 0.86 | 2.02 | 2.871 (3) | 169 |
| O7—H7···O4iv | 0.82 | 1.76 | 2.536 (3) | 158 |
| O1—H1···O3iii | 0.82 | 2.19 | 2.625 (2) | 113 |
| C9—H9···O5iii | 0.93 | 2.60 | 3.154 (3) | 119 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H5 | 0.82 | 1.91 | 2.563 (2) | 136 |
| O3—H3 | 0.82 | 1.76 | 2.546 (2) | 159 |
| O8—H8 | 0.82 | 2.01 | 2.553 (2) | 123 |
| N2—H2⋯O6iii | 0.86 | 2.05 | 2.859 (3) | 157 |
| N1—H1 | 0.86 | 2.02 | 2.871 (3) | 169 |
| O7—H7⋯O4iv | 0.82 | 1.76 | 2.536 (3) | 158 |
| O1—H1⋯O3iii | 0.82 | 2.19 | 2.625 (2) | 113 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .