Literature DB >> 21580362

2-Oxo-2,3-dihydro-1H-imidazo[1,2-a]pyridinium iodide.

Jinling Miao, Jisheng Guo, Chunhua Hu, Daqi Wang, Yong Nie.   

Abstract

In the title compound, C(7)H(7)N(2)O(+)·I(-), the carbonyl C and O atoms of the cation and the iodide ion are situated on mirror planes. The mean plane of the imidazo[1,2-d]pyridinium cation is perpendicular to the mirror plane as a consequence of the disorder of the cation over two opposite orientations of equal occupancy. In the crystal, N-H⋯I interactions are present.

Entities:  

Year:  2010        PMID: 21580362      PMCID: PMC2983633          DOI: 10.1107/S1600536810004976

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of imidazo[1,2-a]pyridinium chloride or bromide, see: Newton et al. (1984 ▶); Baumann et al. (1986 ▶). For the derivatization of imidazo[1,2-a]pyridinium and related structures, see: Plutecka et al. (2006 ▶); Hoffmann et al. (2005 ▶); Qiao et al. (2006 ▶).

Experimental

Crystal data

C7H7N2O+·I− M = 262.05 Orthorhombic, a = 14.597 (2) Å b = 8.2044 (18) Å c = 7.0926 (15) Å V = 849.4 (3) Å3 Z = 4 Mo Kα radiation μ = 3.71 mm−1 T = 298 K 0.48 × 0.45 × 0.23 mm

Data collection

Bruker SMART 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.269, T max = 0.482 3631 measured reflections 806 independent reflections 691 reflections with I > 2σ(I) R int = 0.064

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.103 S = 1.05 806 reflections 73 parameters 24 restraints H-atom parameters constrained Δρmax = 0.70 e Å−3 Δρmin = −0.93 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810004976/cv2672sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810004976/cv2672Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H7N2O+·IDx = 2.049 Mg m3
Mr = 262.05Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, PnmaCell parameters from 1914 reflections
a = 14.597 (2) Åθ = 2.5–27.2°
b = 8.2044 (18) ŵ = 3.71 mm1
c = 7.0926 (15) ÅT = 298 K
V = 849.4 (3) Å3Block, red
Z = 40.48 × 0.45 × 0.23 mm
F(000) = 496
Bruker SMART 1000 CCD area-detector diffractometer806 independent reflections
Radiation source: fine-focus sealed tube691 reflections with I > 2σ(I)
graphiteRint = 0.064
ω scansθmax = 25.0°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −17→13
Tmin = 0.269, Tmax = 0.482k = −9→9
3631 measured reflectionsl = −5→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0619P)2 + 0.9786P] where P = (Fo2 + 2Fc2)/3
806 reflections(Δ/σ)max < 0.001
73 parametersΔρmax = 0.70 e Å3
24 restraintsΔρmin = −0.93 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
I10.41289 (4)0.25000.91066 (7)0.0537 (3)
C40.1109 (3)0.0822 (7)0.9883 (8)0.0519 (13)
H40.1112−0.03110.98440.062*
C50.0758 (4)0.1656 (8)1.1372 (9)0.0551 (14)
H50.05170.10911.23950.066*
O10.2504 (5)0.25000.4103 (7)0.0724 (19)
C10.2120 (6)0.25000.5605 (11)0.053 (2)
C20.184 (3)0.103 (3)0.674 (4)0.050 (9)0.50
H2A0.13840.03860.60730.060*0.50
H2B0.23630.03420.70240.060*0.50
N20.146 (4)0.174 (3)0.846 (4)0.039 (8)0.50
N10.186 (2)0.1164 (19)0.666 (3)0.049 (7)0.50
H10.19350.01700.63090.058*0.50
C30.146 (4)0.161 (4)0.831 (5)0.037 (8)0.50
U11U22U33U12U13U23
I10.0550 (4)0.0434 (4)0.0627 (4)0.000−0.0103 (2)0.000
C40.044 (3)0.044 (3)0.068 (3)0.002 (2)−0.003 (3)0.009 (3)
C50.046 (3)0.064 (4)0.056 (3)0.000 (2)−0.001 (2)0.013 (3)
O10.070 (4)0.099 (5)0.049 (3)0.0000.003 (3)0.000
C10.047 (5)0.058 (5)0.053 (5)0.000−0.004 (4)0.000
C20.054 (13)0.039 (10)0.057 (12)−0.006 (8)0.009 (8)0.005 (8)
N20.032 (10)0.040 (9)0.047 (9)0.004 (7)−0.003 (7)−0.002 (6)
N10.047 (11)0.042 (9)0.058 (11)0.003 (8)−0.016 (8)−0.019 (7)
C30.030 (11)0.034 (10)0.048 (10)−0.002 (6)−0.010 (7)−0.006 (6)
C4—N21.357 (9)C1—N1i1.381 (9)
C4—C51.358 (9)C1—C21.509 (10)
C4—C31.387 (9)C1—C2i1.509 (10)
C4—H40.9300C2—N21.461 (10)
C5—C5i1.386 (14)C2—H2A0.9700
C5—H50.9300C2—H2B0.9700
O1—C11.204 (9)N1—C31.360 (10)
C1—N11.381 (9)N1—H10.8600
N2—C4—C5116.2 (14)O1—C1—C2i126.8 (12)
N2—C4—C36(3)N1—C1—C2i105.8 (7)
C5—C4—C3121.9 (16)N1i—C1—C2i1(3)
N2—C4—H4121.9C2—C1—C2i106 (2)
C5—C4—H4121.9N2—C2—C1103.3 (11)
C3—C4—H4116.2N2—C2—H2A111.1
C4—C5—C5i120.2 (4)C1—C2—H2A111.1
C4—C5—H5119.9N2—C2—H2B111.1
C5i—C5—H5119.9C1—C2—H2B111.1
O1—C1—N1127.5 (10)H2A—C2—H2B109.1
O1—C1—N1i127.5 (10)C4—N2—C2122.9 (19)
N1—C1—N1i105 (2)C3—N1—C1111.7 (10)
O1—C1—C2126.8 (12)C3—N1—H1124.1
N1—C1—C21(3)C1—N1—H1124.1
N1i—C1—C2105.8 (7)N1—C3—C4136 (2)
D—H···AD—HH···AD···AD—H···A
N1—H2A···I1ii1.032.853.80 (2)153
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H2A⋯I1i1.032.853.80 (2)153

Symmetry code: (i) .

  3 in total

1.  New type of bonding formed from an overlap between pi aromatic and pi C=O molecular orbitals stabilizes the coexistence in one molecule of the ionic and neutral meso-ionic forms of imidazopyridine.

Authors:  Marcin Hoffmann; Agnieszka Plutecka; Urszula Rychlewska; Zdzislaw Kucybala; Jerzy Paczkowski; Ilona Pyszka
Journal:  J Phys Chem A       Date:  2005-05-26       Impact factor: 2.781

2.  Relationship between structure and photoinitiating abilities of selected bromide salts of 2-oxo-2,3-dihydro-1H-imidazo[1,2-a]pyridine (IMP): influence of the solvent and the substitution in benzaldehyde on the course of its reaction with IMP.

Authors:  Agnieszka Plutecka; Marcin Hoffmann; Urszula Rychlewska; Zdzisław Kucybała; Jerzy Paczkowski; Ilona Pyszka
Journal:  Acta Crystallogr B       Date:  2006-01-17

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  3 in total

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