| Literature DB >> 21580347 |
Chin Sing Yeap1, Madhukar Hemamalini, Hoong-Kun Fun.
Abstract
The title Schiff base compound, C(13)H(11)NO(5)S·3H(2)O, formed from sulfanilic acid and 2,4-dihydroxy-benzaldehyde, crystallized out as a zwitterion with the N atom protonated. The asymmetric unit consists of one 4-[(2,4-dihydroxy-benzyl-idene)ammonio]benzene-sulfonate and three water mol-ecules. The zwitterion exists in an E configuration with respect to the central C=N double bond. The two benzene rings of the mol-ecule are oriented at a dihedral angle of 27.33 (8)°. An intra-molecular N-H⋯O hydrogen bond stabilizes the mol-ecular structure. In the crystal, the zwitterions are linked into chains along [101] by inter-molecular O-H⋯O and N-H⋯O hydrogen bonds. The three water mol-ecules link these chains into a three-dimensional framework by additional inter-molecular O-H⋯O hydrogen bonds. A π⋯π inter-action [3.5485 (9) Å] further stabilizes the crystal structure.Entities:
Year: 2010 PMID: 21580347 PMCID: PMC2983714 DOI: 10.1107/S1600536810004526
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H11NO5S·3H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 7701 reflections | |
| θ = 2.6–32.1° | |
| µ = 0.26 mm−1 | |
| α = 70.022 (1)° | |
| β = 79.271 (1)° | Block, yellow |
| γ = 76.141 (1)° | 0.36 × 0.16 × 0.08 mm |
| Bruker SMART APEXII CCD area-detector diffractometer | 5420 independent reflections |
| Radiation source: fine-focus sealed tube | 4177 reflections with |
| graphite | |
| φ and ω scans | θmax = 32.4°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 19799 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 5420 reflections | (Δ/σ)max = 0.001 |
| 220 parameters | Δρmax = 0.61 e Å−3 |
| 0 restraints | Δρmin = −0.60 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.71640 (6) | 0.60676 (5) | 1.18660 (4) | 0.02504 (12) | |
| O1 | 0.33982 (17) | 0.77778 (14) | 0.52286 (11) | 0.0226 (2) | |
| O2 | 0.00861 (17) | 1.21132 (17) | 0.24684 (11) | 0.0256 (3) | |
| O3 | 0.89905 (19) | 0.52191 (18) | 1.16735 (13) | 0.0371 (3) | |
| O4 | 0.7119 (3) | 0.75067 (16) | 1.21434 (16) | 0.0530 (5) | |
| O5 | 0.60457 (18) | 0.50241 (15) | 1.27306 (10) | 0.0267 (3) | |
| N1 | 0.41704 (17) | 0.82152 (16) | 0.71713 (11) | 0.0170 (2) | |
| C1 | 0.2641 (2) | 0.93133 (18) | 0.48282 (13) | 0.0170 (3) | |
| C2 | 0.1775 (2) | 0.99664 (19) | 0.37933 (13) | 0.0190 (3) | |
| H2A | 0.1728 | 0.9331 | 0.3333 | 0.023* | |
| C3 | 0.0980 (2) | 1.15723 (19) | 0.34488 (13) | 0.0195 (3) | |
| C4 | 0.1103 (2) | 1.25788 (19) | 0.40959 (14) | 0.0207 (3) | |
| H4A | 0.0593 | 1.3658 | 0.3843 | 0.025* | |
| C5 | 0.1987 (2) | 1.19458 (18) | 0.51051 (14) | 0.0188 (3) | |
| H5A | 0.2090 | 1.2609 | 0.5528 | 0.023* | |
| C6 | 0.2748 (2) | 1.02971 (17) | 0.55143 (13) | 0.0162 (3) | |
| C7 | 0.3521 (2) | 0.97063 (18) | 0.66134 (13) | 0.0171 (3) | |
| H7A | 0.3572 | 1.0454 | 0.6975 | 0.021* | |
| C8 | 0.4854 (2) | 0.76888 (17) | 0.83072 (13) | 0.0169 (3) | |
| C9 | 0.4177 (2) | 0.85045 (19) | 0.91434 (14) | 0.0212 (3) | |
| H9A | 0.3246 | 0.9379 | 0.8979 | 0.025* | |
| C10 | 0.4905 (2) | 0.79988 (19) | 1.02271 (14) | 0.0219 (3) | |
| H10A | 0.4466 | 0.8537 | 1.0793 | 0.026* | |
| C11 | 0.6291 (2) | 0.66864 (18) | 1.04650 (14) | 0.0197 (3) | |
| C12 | 0.6933 (2) | 0.58417 (18) | 0.96441 (14) | 0.0203 (3) | |
| H12A | 0.7847 | 0.4954 | 0.9817 | 0.024* | |
| C13 | 0.6196 (2) | 0.63345 (18) | 0.85627 (14) | 0.0188 (3) | |
| H13A | 0.6595 | 0.5765 | 0.8014 | 0.023* | |
| O1W | 0.1128 (3) | 0.7226 (3) | 0.22066 (18) | 0.0639 (6) | |
| H1W1 | 0.0299 | 0.6832 | 0.2044 | 0.096* | |
| H2W1 | 0.0754 | 0.8189 | 0.1836 | 0.096* | |
| O2W | 0.0858 (3) | 1.0446 (3) | 0.0769 (2) | 0.0815 (7) | |
| H1W2 | 0.1929 | 0.9994 | 0.0628 | 0.122* | |
| H2W2 | 0.0424 | 1.1170 | 0.1224 | 0.122* | |
| O3W | 0.3001 (2) | 0.59375 (18) | 0.41308 (14) | 0.0368 (3) | |
| H1W3 | 0.4180 | 0.5558 | 0.3796 | 0.055* | |
| H2W3 | 0.2254 | 0.6348 | 0.3604 | 0.055* | |
| H1N1 | 0.415 (3) | 0.747 (3) | 0.689 (2) | 0.041 (7)* | |
| H1O1 | 0.327 (4) | 0.719 (4) | 0.478 (3) | 0.057 (8)* | |
| H1O2 | −0.027 (3) | 1.305 (3) | 0.236 (2) | 0.036 (7)* |
| S1 | 0.0369 (2) | 0.01588 (18) | 0.0241 (2) | −0.00608 (15) | −0.01801 (17) | −0.00021 (14) |
| O1 | 0.0310 (6) | 0.0164 (5) | 0.0212 (5) | −0.0008 (4) | −0.0084 (5) | −0.0063 (4) |
| O2 | 0.0257 (6) | 0.0297 (7) | 0.0188 (5) | −0.0058 (5) | −0.0101 (5) | −0.0001 (5) |
| O3 | 0.0291 (7) | 0.0386 (8) | 0.0338 (7) | −0.0045 (6) | −0.0170 (6) | 0.0066 (6) |
| O4 | 0.0943 (14) | 0.0183 (6) | 0.0590 (10) | −0.0066 (7) | −0.0542 (10) | −0.0072 (6) |
| O5 | 0.0367 (7) | 0.0239 (6) | 0.0173 (5) | −0.0029 (5) | −0.0064 (5) | −0.0037 (4) |
| N1 | 0.0192 (6) | 0.0167 (6) | 0.0146 (5) | −0.0028 (5) | −0.0048 (4) | −0.0031 (5) |
| C1 | 0.0172 (6) | 0.0175 (6) | 0.0165 (6) | −0.0047 (5) | −0.0019 (5) | −0.0047 (5) |
| C2 | 0.0198 (7) | 0.0228 (7) | 0.0158 (6) | −0.0070 (5) | −0.0033 (5) | −0.0051 (5) |
| C3 | 0.0176 (7) | 0.0241 (7) | 0.0145 (6) | −0.0066 (5) | −0.0037 (5) | −0.0004 (5) |
| C4 | 0.0208 (7) | 0.0186 (7) | 0.0195 (7) | −0.0035 (5) | −0.0043 (6) | −0.0008 (5) |
| C5 | 0.0219 (7) | 0.0161 (6) | 0.0175 (6) | −0.0034 (5) | −0.0042 (5) | −0.0033 (5) |
| C6 | 0.0177 (6) | 0.0159 (6) | 0.0145 (6) | −0.0032 (5) | −0.0035 (5) | −0.0031 (5) |
| C7 | 0.0193 (7) | 0.0165 (6) | 0.0152 (6) | −0.0035 (5) | −0.0047 (5) | −0.0031 (5) |
| C8 | 0.0174 (6) | 0.0165 (6) | 0.0150 (6) | −0.0039 (5) | −0.0044 (5) | −0.0012 (5) |
| C9 | 0.0247 (7) | 0.0184 (7) | 0.0182 (7) | 0.0005 (6) | −0.0065 (6) | −0.0039 (5) |
| C10 | 0.0288 (8) | 0.0176 (7) | 0.0183 (7) | −0.0018 (6) | −0.0067 (6) | −0.0038 (5) |
| C11 | 0.0234 (7) | 0.0158 (6) | 0.0194 (7) | −0.0068 (5) | −0.0082 (6) | 0.0004 (5) |
| C12 | 0.0192 (7) | 0.0170 (7) | 0.0211 (7) | −0.0025 (5) | −0.0063 (5) | −0.0002 (5) |
| C13 | 0.0195 (7) | 0.0176 (6) | 0.0178 (6) | −0.0031 (5) | −0.0025 (5) | −0.0038 (5) |
| O1W | 0.0496 (11) | 0.1022 (17) | 0.0610 (12) | −0.0363 (11) | −0.0095 (9) | −0.0358 (12) |
| O2W | 0.0746 (15) | 0.120 (2) | 0.0831 (16) | −0.0358 (15) | 0.0051 (12) | −0.0697 (16) |
| O3W | 0.0402 (8) | 0.0364 (7) | 0.0420 (8) | −0.0097 (6) | 0.0007 (6) | −0.0238 (6) |
| S1—O4 | 1.4441 (14) | C5—H5A | 0.9300 |
| S1—O5 | 1.4512 (14) | C6—C7 | 1.417 (2) |
| S1—O3 | 1.4636 (15) | C7—H7A | 0.9300 |
| S1—C11 | 1.7706 (16) | C8—C9 | 1.389 (2) |
| O1—C1 | 1.3325 (18) | C8—C13 | 1.394 (2) |
| O1—H1O1 | 0.90 (3) | C9—C10 | 1.388 (2) |
| O2—C3 | 1.3500 (18) | C9—H9A | 0.9300 |
| O2—H1O2 | 0.80 (3) | C10—C11 | 1.390 (2) |
| N1—C7 | 1.3083 (19) | C10—H10A | 0.9300 |
| N1—C8 | 1.4247 (19) | C11—C12 | 1.389 (2) |
| N1—H1N1 | 0.85 (3) | C12—C13 | 1.390 (2) |
| C1—C2 | 1.389 (2) | C12—H12A | 0.9300 |
| C1—C6 | 1.422 (2) | C13—H13A | 0.9300 |
| C2—C3 | 1.390 (2) | O1W—H1W1 | 0.8863 |
| C2—H2A | 0.9300 | O1W—H2W1 | 0.8403 |
| C3—C4 | 1.408 (2) | O2W—H1W2 | 0.8500 |
| C4—C5 | 1.372 (2) | O2W—H2W2 | 0.9519 |
| C4—H4A | 0.9300 | O3W—H1W3 | 0.9617 |
| C5—C6 | 1.419 (2) | O3W—H2W3 | 0.8594 |
| O4—S1—O5 | 113.78 (10) | C7—C6—C1 | 123.35 (13) |
| O4—S1—O3 | 111.65 (11) | C5—C6—C1 | 118.67 (13) |
| O5—S1—O3 | 111.87 (8) | N1—C7—C6 | 126.60 (14) |
| O4—S1—C11 | 106.23 (8) | N1—C7—H7A | 116.7 |
| O5—S1—C11 | 106.54 (8) | C6—C7—H7A | 116.7 |
| O3—S1—C11 | 106.16 (8) | C9—C8—C13 | 121.03 (14) |
| C1—O1—H1O1 | 114.3 (19) | C9—C8—N1 | 120.33 (13) |
| C3—O2—H1O2 | 106.3 (18) | C13—C8—N1 | 118.64 (13) |
| C7—N1—C8 | 123.83 (13) | C10—C9—C8 | 119.21 (14) |
| C7—N1—H1N1 | 121.2 (17) | C10—C9—H9A | 120.4 |
| C8—N1—H1N1 | 114.9 (17) | C8—C9—H9A | 120.4 |
| O1—C1—C2 | 123.11 (14) | C9—C10—C11 | 119.89 (15) |
| O1—C1—C6 | 116.94 (13) | C9—C10—H10A | 120.1 |
| C2—C1—C6 | 119.94 (14) | C11—C10—H10A | 120.1 |
| C1—C2—C3 | 119.77 (14) | C12—C11—C10 | 120.89 (14) |
| C1—C2—H2A | 120.1 | C12—C11—S1 | 120.66 (12) |
| C3—C2—H2A | 120.1 | C10—C11—S1 | 118.41 (12) |
| O2—C3—C2 | 116.77 (15) | C11—C12—C13 | 119.41 (14) |
| O2—C3—C4 | 121.90 (15) | C11—C12—H12A | 120.3 |
| C2—C3—C4 | 121.33 (14) | C13—C12—H12A | 120.3 |
| C5—C4—C3 | 119.07 (14) | C12—C13—C8 | 119.48 (14) |
| C5—C4—H4A | 120.5 | C12—C13—H13A | 120.3 |
| C3—C4—H4A | 120.5 | C8—C13—H13A | 120.3 |
| C4—C5—C6 | 121.14 (14) | H1W1—O1W—H2W1 | 97.0 |
| C4—C5—H5A | 119.4 | H1W2—O2W—H2W2 | 127.8 |
| C6—C5—H5A | 119.4 | H1W3—O3W—H2W3 | 113.2 |
| C7—C6—C5 | 117.94 (13) | ||
| O1—C1—C2—C3 | 178.43 (14) | C7—N1—C8—C13 | −150.63 (15) |
| C6—C1—C2—C3 | −1.5 (2) | C13—C8—C9—C10 | 2.8 (2) |
| C1—C2—C3—O2 | −176.86 (14) | N1—C8—C9—C10 | −177.92 (15) |
| C1—C2—C3—C4 | 3.1 (2) | C8—C9—C10—C11 | −0.2 (2) |
| O2—C3—C4—C5 | 178.14 (14) | C9—C10—C11—C12 | −1.7 (3) |
| C2—C3—C4—C5 | −1.8 (2) | C9—C10—C11—S1 | −179.29 (13) |
| C3—C4—C5—C6 | −1.1 (2) | O4—S1—C11—C12 | 146.08 (15) |
| C4—C5—C6—C7 | −175.27 (15) | O5—S1—C11—C12 | −92.28 (15) |
| C4—C5—C6—C1 | 2.5 (2) | O3—S1—C11—C12 | 27.10 (16) |
| O1—C1—C6—C7 | −3.5 (2) | O4—S1—C11—C10 | −36.33 (17) |
| C2—C1—C6—C7 | 176.45 (14) | O5—S1—C11—C10 | 85.31 (14) |
| O1—C1—C6—C5 | 178.82 (14) | O3—S1—C11—C10 | −155.30 (14) |
| C2—C1—C6—C5 | −1.2 (2) | C10—C11—C12—C13 | 1.1 (2) |
| C8—N1—C7—C6 | −176.86 (14) | S1—C11—C12—C13 | 178.61 (12) |
| C5—C6—C7—N1 | 174.98 (15) | C11—C12—C13—C8 | 1.5 (2) |
| C1—C6—C7—N1 | −2.7 (3) | C9—C8—C13—C12 | −3.4 (2) |
| C7—N1—C8—C9 | 30.1 (2) | N1—C8—C13—C12 | 177.29 (14) |
| H··· | ||||
| O1W—H1W1···O3i | 0.89 | 2.17 | 3.020 (3) | 161 |
| O1W—H1W1···O4i | 0.89 | 2.39 | 3.083 (3) | 135 |
| O1W—H2W1···O2W | 0.84 | 2.02 | 2.817 (4) | 158 |
| O2W—H2W2···O2 | 0.95 | 1.89 | 2.812 (3) | 161 |
| O3W—H1W3···O5ii | 0.96 | 1.83 | 2.756 (2) | 161 |
| O3W—H2W3···O1W | 0.86 | 1.86 | 2.701 (3) | 166 |
| N1—H1N1···O1 | 0.86 (3) | 2.07 (2) | 2.6601 (18) | 126 (2) |
| N1—H1N1···O5iii | 0.86 (3) | 2.19 (3) | 2.948 (2) | 148 (2) |
| O1—H1O1···O3W | 0.90 (3) | 1.64 (4) | 2.543 (2) | 173 (4) |
| O2—H1O2···O3iv | 0.80 (3) | 1.85 (3) | 2.627 (2) | 164 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.89 | 2.17 | 3.020 (3) | 161 |
| O1 | 0.89 | 2.39 | 3.083 (3) | 135 |
| O1 | 0.84 | 2.02 | 2.817 (4) | 158 |
| O2 | 0.95 | 1.89 | 2.812 (3) | 161 |
| O3 | 0.96 | 1.83 | 2.756 (2) | 161 |
| O3 | 0.86 | 1.86 | 2.701 (3) | 166 |
| N1—H1 | 0.86 (3) | 2.07 (2) | 2.6601 (18) | 126 (2) |
| N1—H1 | 0.86 (3) | 2.19 (3) | 2.948 (2) | 148 (2) |
| O1—H1 | 0.90 (3) | 1.64 (4) | 2.543 (2) | 173 (4) |
| O2—H1 | 0.80 (3) | 1.85 (3) | 2.627 (2) | 164 (2) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .