Literature DB >> 21580311

4-[(E)-(5-tert-Butyl-2-hydroxy-phen-yl)diazen-yl]benzoic acid benzene hemisolvate.

Tushar S Basu Baul, Anup Paul, Edward R T Tiekink.   

Abstract

The title benzene hemisolvate, C(17)H(18)N(2)O(3)·0.5C(6)H(6), features an essentially planar (the r.m.s. deviation of the non-H atoms, excluding methyl-C, is 0.071 Å) diazo mol-ecule with an E conformation about the N=N bond, and a half-mol-ecule of benzene disposed about a centre of inversion. The dihedral angle formed between the benzene rings of the diazo mol-ecule is 7.69 (12)°. In the crystal, centrosymmetrically related dimers associate via the eight-membered carboxylic acid dimer synthon, {⋯HOC(=O)}(2), and these are connected into a supra-molecular chain along the b axis via C-H⋯O contacts.

Entities:  

Year:  2010        PMID: 21580311      PMCID: PMC2983727          DOI: 10.1107/S1600536810003880

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to and motivation for the synthesis of the title compound, see: Basu Baul et al. (2010a ▶,b ▶,c ▶). For the structure of a related diazo compound, see: Basu Baul et al. (2008 ▶).

Experimental

Crystal data

C17H18N2O3·0.5C6H6 M = 337.39 Triclinic, a = 6.0960 (2) Å b = 7.3578 (3) Å c = 20.6562 (7) Å α = 81.326 (2)° β = 88.992 (2)° γ = 71.355 (2)° V = 867.37 (5) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.49 × 0.09 × 0.03 mm

Data collection

Bruker SMART APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.859, T max = 1 11445 measured reflections 3053 independent reflections 1888 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.157 S = 1.08 3053 reflections 232 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.39 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS86 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810003880/hg2642sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810003880/hg2642Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H18N2O3·0.5C6H6Z = 2
Mr = 337.39F(000) = 358
Triclinic, P1Dx = 1.292 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.0960 (2) ÅCell parameters from 2230 reflections
b = 7.3578 (3) Åθ = 3.0–25.1°
c = 20.6562 (7) ŵ = 0.09 mm1
α = 81.326 (2)°T = 100 K
β = 88.992 (2)°Plate, orange
γ = 71.355 (2)°0.49 × 0.09 × 0.03 mm
V = 867.37 (5) Å3
Bruker SMART APEXII diffractometer3053 independent reflections
Radiation source: sealed tube1888 reflections with I > 2σ(I)
graphiteRint = 0.049
φ and ω scansθmax = 25.0°, θmin = 1.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −7→7
Tmin = 0.859, Tmax = 1k = −8→8
11445 measured reflectionsl = −24→24
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.157H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0815P)2 + 0.0458P] where P = (Fo2 + 2Fc2)/3
3053 reflections(Δ/σ)max = 0.001
232 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.39 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.9406 (3)0.7864 (2)0.00097 (8)0.0270 (5)
O20.7757 (3)1.0387 (2)0.05359 (8)0.0270 (5)
H2O0.87091.08270.03210.040*
O30.0159 (3)0.2070 (2)0.17405 (9)0.0295 (5)
H3O0.10190.26900.15690.044*
N10.1696 (3)0.4998 (3)0.15671 (9)0.0214 (5)
N20.0282 (3)0.5895 (3)0.19601 (9)0.0214 (5)
C10.7939 (4)0.8718 (4)0.03965 (11)0.0200 (6)
C20.6296 (4)0.7767 (3)0.07027 (11)0.0186 (6)
C30.6505 (4)0.5880 (4)0.06190 (11)0.0215 (6)
H30.77040.51960.03620.026*
C40.4971 (4)0.5002 (4)0.09100 (11)0.0224 (6)
H40.51200.37090.08560.027*
C50.3208 (4)0.6011 (4)0.12827 (11)0.0187 (6)
C60.2955 (4)0.7910 (4)0.13581 (11)0.0210 (6)
H60.17220.86100.16020.025*
C70.4513 (4)0.8766 (4)0.10745 (11)0.0224 (6)
H70.43711.00550.11330.027*
C8−0.1216 (4)0.4932 (4)0.22568 (11)0.0193 (6)
C9−0.1262 (4)0.3104 (4)0.21544 (12)0.0215 (6)
C10−0.2869 (4)0.2363 (4)0.24863 (12)0.0254 (6)
H10−0.29420.11340.24190.030*
C11−0.4361 (4)0.3394 (4)0.29125 (12)0.0245 (6)
H11−0.54370.28490.31340.029*
C12−0.4341 (4)0.5213 (4)0.30302 (11)0.0201 (6)
C13−0.2753 (4)0.5933 (4)0.26916 (12)0.0213 (6)
H13−0.26990.71690.27570.026*
C14−0.5974 (4)0.6396 (4)0.35012 (12)0.0241 (6)
C15−0.7522 (5)0.5308 (4)0.38459 (13)0.0357 (8)
H15A−0.85140.50800.35200.053*
H15B−0.84890.60830.41540.053*
H15C−0.65570.40600.40850.053*
C16−0.4527 (5)0.6816 (4)0.40241 (13)0.0344 (7)
H16A−0.35850.55900.42810.052*
H16B−0.55590.76190.43140.052*
H16C−0.35110.75080.38110.052*
C17−0.7517 (5)0.8319 (4)0.31170 (13)0.0307 (7)
H17A−0.65430.90440.28990.046*
H17B−0.85310.90880.34190.046*
H17C−0.84620.80520.27870.046*
C180.8298 (5)0.0370 (4)0.45204 (13)0.0313 (7)
H180.71230.06200.41920.038*
C190.9784 (5)0.1460 (4)0.44705 (13)0.0305 (7)
H190.96400.24580.41080.037*
C201.1478 (5)0.1084 (4)0.49518 (13)0.0334 (7)
H201.25010.18310.49200.040*
U11U22U33U12U13U23
O10.0223 (10)0.0252 (10)0.0326 (10)−0.0054 (8)0.0128 (8)−0.0077 (8)
O20.0259 (11)0.0235 (11)0.0361 (11)−0.0136 (9)0.0103 (9)−0.0074 (9)
O30.0302 (11)0.0227 (10)0.0384 (11)−0.0097 (9)0.0153 (9)−0.0123 (9)
N10.0173 (11)0.0237 (12)0.0241 (11)−0.0065 (10)0.0041 (9)−0.0067 (10)
N20.0183 (11)0.0236 (12)0.0235 (11)−0.0074 (10)0.0046 (9)−0.0062 (10)
C10.0195 (14)0.0191 (14)0.0220 (14)−0.0065 (12)0.0018 (11)−0.0045 (11)
C20.0167 (14)0.0205 (14)0.0185 (13)−0.0058 (11)0.0021 (11)−0.0038 (11)
C30.0192 (14)0.0264 (16)0.0190 (13)−0.0059 (12)0.0056 (11)−0.0071 (11)
C40.0219 (14)0.0221 (15)0.0251 (14)−0.0075 (12)0.0046 (11)−0.0087 (11)
C50.0154 (13)0.0229 (15)0.0198 (13)−0.0082 (11)0.0025 (11)−0.0046 (11)
C60.0179 (14)0.0221 (15)0.0224 (13)−0.0039 (12)0.0072 (11)−0.0080 (11)
C70.0228 (15)0.0224 (15)0.0232 (14)−0.0079 (12)0.0029 (12)−0.0060 (12)
C80.0175 (13)0.0217 (14)0.0208 (13)−0.0094 (12)0.0004 (11)−0.0032 (11)
C90.0194 (14)0.0222 (15)0.0226 (14)−0.0054 (12)0.0022 (11)−0.0051 (11)
C100.0265 (15)0.0208 (15)0.0316 (15)−0.0109 (13)0.0044 (12)−0.0059 (12)
C110.0212 (15)0.0279 (16)0.0260 (14)−0.0118 (12)0.0032 (12)−0.0012 (12)
C120.0168 (13)0.0231 (15)0.0196 (13)−0.0054 (11)0.0013 (11)−0.0027 (11)
C130.0201 (14)0.0218 (14)0.0245 (14)−0.0079 (12)0.0023 (11)−0.0088 (11)
C140.0204 (14)0.0304 (16)0.0239 (14)−0.0096 (12)0.0056 (11)−0.0085 (12)
C150.0292 (16)0.0411 (18)0.0372 (17)−0.0118 (14)0.0160 (14)−0.0081 (14)
C160.0270 (16)0.0456 (19)0.0325 (16)−0.0092 (14)0.0073 (13)−0.0177 (14)
C170.0257 (16)0.0315 (17)0.0335 (16)−0.0048 (13)0.0096 (13)−0.0111 (13)
C180.0308 (17)0.0334 (17)0.0301 (16)−0.0093 (14)0.0007 (13)−0.0084 (13)
C190.0381 (17)0.0265 (16)0.0270 (15)−0.0099 (14)0.0067 (13)−0.0055 (12)
C200.0365 (18)0.0378 (18)0.0335 (16)−0.0199 (15)0.0076 (14)−0.0114 (14)
O1—C11.265 (3)C11—C121.400 (4)
O2—C11.274 (3)C11—H110.9500
O2—H2O0.8400C12—C131.379 (3)
O3—C91.345 (3)C12—C141.537 (3)
O3—H3O0.8400C13—H130.9500
N1—N21.269 (3)C14—C151.526 (3)
N1—C51.427 (3)C14—C161.533 (4)
N2—C81.406 (3)C14—C171.534 (4)
C1—C21.478 (3)C15—H15A0.9800
C2—C31.390 (3)C15—H15B0.9800
C2—C71.393 (3)C15—H15C0.9800
C3—C41.379 (3)C16—H16A0.9800
C3—H30.9500C16—H16B0.9800
C4—C51.390 (3)C16—H16C0.9800
C4—H40.9500C17—H17A0.9800
C5—C61.389 (3)C17—H17B0.9800
C6—C71.376 (3)C17—H17C0.9800
C6—H60.9500C18—C20i1.383 (4)
C7—H70.9500C18—C191.383 (4)
C8—C131.398 (3)C18—H180.9500
C8—C91.401 (3)C19—C201.379 (4)
C9—C101.390 (3)C19—H190.9500
C10—C111.382 (3)C20—C18i1.383 (4)
C10—H100.9500C20—H200.9500
C1—O2—H2O109.5C13—C12—C14120.3 (2)
C9—O3—H3O109.5C11—C12—C14123.6 (2)
N2—N1—C5114.0 (2)C12—C13—C8123.2 (2)
N1—N2—C8115.6 (2)C12—C13—H13118.4
O1—C1—O2123.8 (2)C8—C13—H13118.4
O1—C1—C2119.2 (2)C15—C14—C16108.3 (2)
O2—C1—C2117.0 (2)C15—C14—C17108.6 (2)
C3—C2—C7119.5 (2)C16—C14—C17109.4 (2)
C3—C2—C1120.4 (2)C15—C14—C12111.9 (2)
C7—C2—C1120.1 (2)C16—C14—C12109.1 (2)
C4—C3—C2120.0 (2)C17—C14—C12109.44 (19)
C4—C3—H3120.0C14—C15—H15A109.5
C2—C3—H3120.0C14—C15—H15B109.5
C3—C4—C5119.9 (2)H15A—C15—H15B109.5
C3—C4—H4120.0C14—C15—H15C109.5
C5—C4—H4120.0H15A—C15—H15C109.5
C6—C5—C4120.5 (2)H15B—C15—H15C109.5
C6—C5—N1123.0 (2)C14—C16—H16A109.5
C4—C5—N1116.4 (2)C14—C16—H16B109.5
C7—C6—C5119.2 (2)H16A—C16—H16B109.5
C7—C6—H6120.4C14—C16—H16C109.5
C5—C6—H6120.4H16A—C16—H16C109.5
C6—C7—C2120.8 (2)H16B—C16—H16C109.5
C6—C7—H7119.6C14—C17—H17A109.5
C2—C7—H7119.6C14—C17—H17B109.5
C13—C8—C9119.4 (2)H17A—C17—H17B109.5
C13—C8—N2114.9 (2)C14—C17—H17C109.5
C9—C8—N2125.7 (2)H17A—C17—H17C109.5
O3—C9—C10119.3 (2)H17B—C17—H17C109.5
O3—C9—C8122.4 (2)C20i—C18—C19120.0 (3)
C10—C9—C8118.3 (2)C20i—C18—H18120.0
C11—C10—C9120.7 (2)C19—C18—H18120.0
C11—C10—H10119.6C20—C19—C18119.3 (3)
C9—C10—H10119.6C20—C19—H19120.3
C10—C11—C12122.3 (2)C18—C19—H19120.3
C10—C11—H11118.8C19—C20—C18i120.7 (3)
C12—C11—H11118.8C19—C20—H20119.7
C13—C12—C11116.1 (2)C18i—C20—H20119.7
C5—N1—N2—C8−179.2 (2)N2—C8—C9—O3−0.9 (4)
O1—C1—C2—C36.4 (4)C13—C8—C9—C100.8 (4)
O2—C1—C2—C3−174.6 (2)N2—C8—C9—C10−179.7 (2)
O1—C1—C2—C7−173.2 (2)O3—C9—C10—C11−179.7 (2)
O2—C1—C2—C75.8 (4)C8—C9—C10—C11−0.8 (4)
C7—C2—C3—C4−0.8 (4)C9—C10—C11—C120.2 (4)
C1—C2—C3—C4179.6 (2)C10—C11—C12—C130.5 (4)
C2—C3—C4—C50.5 (4)C10—C11—C12—C14−179.9 (2)
C3—C4—C5—C60.9 (4)C11—C12—C13—C8−0.5 (4)
C3—C4—C5—N1−180.0 (2)C14—C12—C13—C8179.9 (2)
N2—N1—C5—C6−8.3 (3)C9—C8—C13—C12−0.1 (4)
N2—N1—C5—C4172.6 (2)N2—C8—C13—C12−179.7 (2)
C4—C5—C6—C7−1.8 (4)C13—C12—C14—C15−177.7 (2)
N1—C5—C6—C7179.1 (2)C11—C12—C14—C152.7 (4)
C5—C6—C7—C21.5 (4)C13—C12—C14—C16−57.8 (3)
C3—C2—C7—C6−0.2 (4)C11—C12—C14—C16122.6 (3)
C1—C2—C7—C6179.4 (2)C13—C12—C14—C1761.9 (3)
N1—N2—C8—C13179.6 (2)C11—C12—C14—C17−117.7 (3)
N1—N2—C8—C90.1 (4)C20i—C18—C19—C20−0.2 (4)
C13—C8—C9—O3179.6 (2)C18—C19—C20—C18i0.2 (4)
D—H···AD—HH···AD···AD—H···A
O3—H3o···N10.841.872.587 (3)142
O2—H2o···O1ii0.841.792.614 (3)167
C3—H3···O1iii0.952.593.473 (3)155
C6—H6···O3iv0.952.483.201 (3)133
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3o⋯N10.841.872.587 (3)142
O2—H2o⋯O1i0.841.792.614 (3)167
C3—H3⋯O1ii0.952.593.473 (3)155
C6—H6⋯O3iii0.952.483.201 (3)133

Symmetry codes: (i) ; (ii) ; (iii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Dibutyltin(IV) complexes containing arylazobenzoate ligands: chemistry, in vitro cytotoxic effects on human tumor cell lines and mode of interaction with some enzymes.

Authors:  Tushar S Basu Baul; Anup Paul; Lorenzo Pellerito; Michelangelo Scopelliti; Palwinder Singh; Pooja Verma; Andrew Duthie; Dick de Vos; Edward R T Tiekink
Journal:  Invest New Drugs       Date:  2009-12-11       Impact factor: 3.850

3.  2-[(E)-(5-tert-Butyl-2-hydroxy-phen-yl)-diazen-yl]benzoic acid.

Authors:  Tushar S Basu Baul; Anup Paul; Hadi D Arman; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-18

4.  Triphenyltin(IV) 2-[(E)-2-(aryl)-1-diazenyl]benzoates as anticancer drugs: synthesis, structural characterization, in vitro cytotoxicity and study of its influence towards the mechanistic role of some key enzymes.

Authors:  Tushar S Basu Baul; Anup Paul; Lorenzo Pellerito; Michelangelo Scopelliti; Palwinder Singh; Pooja Verma; Dick de Vos
Journal:  Invest New Drugs       Date:  2009-07-30       Impact factor: 3.850

  4 in total

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