Literature DB >> 21580308

1-{4-[(1H-1,2,4-Triazol-1-yl)meth-yl]benz-yl}-1H-1,2,4-triazol-4-ium perchlorate.

Zhao-Jian Hu1, Xiu-Kai Guo, Huan Xu, Ming-Yang He, Li Geng.   

Abstract

In the crystal structure of the title compound, C(12)H(13)N(6) (+)·ClO(4) (-), the cation, located about an inversion center, is monoprotonated, and one H atom is disordered over two sites on N atoms of the two triazole rings, each with an occupancy factor of 0.5. The perchlorate anion has C(2) symmetry, the Cl atom and one O atom lying on the twofold rotation axis; the anion is thus disordered over two sites of equal occupancy. In the cation, the triazole ring makes a dihedral angle of 84.75 (7)° with the plane of the benzene ring. In the crystal, inter-molecular N-H⋯N hydrogen bonding between the triazole and triazolium rings links the cations into a wave-like supra-molecular chain. Weak inter-molecular C-H⋯N and C-H⋯O hydrogen bonding is also present.

Entities:  

Year:  2010        PMID: 21580308      PMCID: PMC2983622          DOI: 10.1107/S1600536810002618

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the versatile conformations of the flexible 1,4-bis­(1,2,4-triazol-1-yl-meth­yl)benzene ligand, see: Arion et al. (2003 ▶); Peng et al. (2004 ▶, 2006 ▶); Meng et al. (2004 ▶); Li et al. (2005 ▶); Ding et al. (2009 ▶).

Experimental

Crystal data

C12H13N6ClO4 M = 340.73 Monoclinic, a = 15.140 (5) Å b = 11.362 (3) Å c = 10.408 (3) Å β = 124.500 (5)° V = 1475.5 (7) Å3 Z = 4 Mo Kα radiation μ = 0.29 mm−1 T = 297 K 0.20 × 0.15 × 0.14 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.944, T max = 0.961 4272 measured reflections 1436 independent reflections 1215 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.139 S = 1.09 1436 reflections 120 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.61 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2005 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810002618/xu2715sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810002618/xu2715Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H13N6+·ClO4F(000) = 704
Mr = 340.73Dx = 1.534 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 1942 reflections
a = 15.140 (5) Åθ = 2.4–27.5°
b = 11.362 (3) ŵ = 0.29 mm1
c = 10.408 (3) ÅT = 297 K
β = 124.500 (5)°Block, colorless
V = 1475.5 (7) Å30.20 × 0.15 × 0.14 mm
Z = 4
Bruker APEXII CCD diffractometer1436 independent reflections
Radiation source: fine-focus sealed tube1215 reflections with I > 2σ(I)
graphiteRint = 0.021
φ and ω scansθmax = 26.0°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −12→18
Tmin = 0.944, Tmax = 0.961k = −13→13
4272 measured reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.139H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0491P)2 + 2.663P] where P = (Fo2 + 2Fc2)/3
1436 reflections(Δ/σ)max < 0.001
120 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.61 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
C10.3304 (2)0.1668 (2)0.5558 (3)0.0423 (6)
H10.38480.11120.59290.051*
C20.27311 (19)0.1755 (2)0.6225 (3)0.0388 (5)
C30.19301 (19)0.2594 (2)0.5662 (3)0.0417 (6)
H30.15450.26650.61060.050*
C40.3004 (2)0.0963 (3)0.7575 (3)0.0526 (7)
H4A0.35780.04330.77990.063*
H4B0.32600.14410.84940.063*
C60.1572 (2)0.0310 (2)0.7933 (3)0.0495 (6)
H60.17350.08090.87480.059*
C50.0862 (2)−0.0993 (2)0.6166 (3)0.0471 (6)
H50.0403−0.15880.55140.057*
N10.20807 (16)0.02713 (17)0.7242 (2)0.0416 (5)
N20.16400 (17)−0.05709 (19)0.6103 (2)0.0466 (5)
N30.07910 (18)−0.0479 (2)0.7274 (3)0.0506 (6)
H3A0.0338−0.06300.75010.061*0.50
Cl10.50000.16865 (9)0.25000.0749 (4)
O10.3684 (4)0.1843 (5)0.1366 (6)0.0902 (16)0.50
O20.5109 (9)0.1370 (12)0.1316 (12)0.136 (5)0.50
O30.50000.2786 (5)0.25000.254 (5)
O40.5108 (10)0.0799 (8)0.3416 (13)0.122 (3)0.50
U11U22U33U12U13U23
C10.0410 (12)0.0427 (13)0.0453 (13)0.0003 (10)0.0257 (11)−0.0002 (10)
C20.0408 (12)0.0412 (12)0.0334 (11)−0.0083 (10)0.0203 (10)−0.0022 (9)
C30.0451 (13)0.0479 (13)0.0432 (13)−0.0057 (10)0.0316 (11)−0.0048 (10)
C40.0472 (14)0.0639 (17)0.0379 (13)−0.0091 (13)0.0188 (11)0.0072 (12)
C60.0652 (17)0.0506 (14)0.0467 (14)0.0094 (13)0.0400 (13)0.0098 (11)
C50.0482 (14)0.0473 (14)0.0451 (13)−0.0006 (11)0.0260 (12)0.0074 (11)
N10.0500 (11)0.0451 (11)0.0342 (10)−0.0005 (9)0.0266 (9)0.0069 (8)
N20.0533 (12)0.0522 (12)0.0382 (10)−0.0024 (10)0.0283 (10)0.0015 (9)
N30.0535 (13)0.0567 (13)0.0569 (13)0.0105 (11)0.0405 (11)0.0181 (11)
Cl10.1341 (12)0.0393 (5)0.0914 (9)0.0000.0878 (9)0.000
O10.049 (2)0.122 (4)0.085 (3)0.014 (3)0.030 (3)−0.006 (3)
O20.096 (6)0.252 (15)0.073 (4)0.022 (8)0.055 (4)−0.004 (7)
O30.283 (10)0.061 (3)0.401 (14)0.0000.183 (10)0.000
O40.129 (7)0.105 (6)0.120 (7)0.012 (5)0.064 (6)0.061 (5)
C1—C21.388 (3)C5—N31.350 (3)
C1—C3i1.389 (3)C5—H50.9300
C1—H10.9300N1—N21.367 (3)
C2—C31.385 (3)N3—H3A0.8600
C2—C41.515 (3)Cl1—O31.249 (5)
C3—C1i1.389 (3)Cl1—O4ii1.333 (8)
C3—H30.9300Cl1—O41.333 (8)
C4—N11.464 (3)Cl1—O21.381 (9)
C4—H4A0.9700Cl1—O2ii1.381 (9)
C4—H4B0.9700Cl1—O1ii1.653 (5)
C6—N11.319 (3)Cl1—O11.653 (4)
C6—N31.324 (4)O2—O4ii0.843 (13)
C6—H60.9300O4—O2ii0.843 (13)
C5—N21.308 (3)O4—O4ii1.74 (2)
C2—C1—C3i120.4 (2)C6—N3—H3A127.6
C2—C1—H1119.8C5—N3—H3A127.6
C3i—C1—H1119.8O3—Cl1—O4ii139.2 (5)
C3—C2—C1118.9 (2)O3—Cl1—O4139.2 (5)
C3—C2—C4121.0 (2)O4ii—Cl1—O481.7 (10)
C1—C2—C4120.1 (2)O3—Cl1—O2105.1 (5)
C2—C3—C1i120.7 (2)O4—Cl1—O2114.4 (8)
C2—C3—H3119.6O3—Cl1—O2ii105.1 (5)
C1i—C3—H3119.6O4ii—Cl1—O2ii114.4 (8)
N1—C4—C2112.1 (2)O2—Cl1—O2ii149.8 (11)
N1—C4—H4A109.2O3—Cl1—O1ii83.8 (2)
C2—C4—H4A109.2O4ii—Cl1—O1ii101.6 (6)
N1—C4—H4B109.2O4—Cl1—O1ii87.8 (6)
C2—C4—H4B109.2O2—Cl1—O1ii87.7 (5)
H4A—C4—H4B107.9O2ii—Cl1—O1ii95.5 (5)
N1—C6—N3108.7 (2)O3—Cl1—O183.8 (2)
N1—C6—H6125.6O4ii—Cl1—O187.8 (6)
N3—C6—H6125.6O4—Cl1—O1101.6 (6)
N2—C5—N3113.2 (2)O2—Cl1—O195.5 (5)
N2—C5—H5123.4O2ii—Cl1—O187.7 (5)
N3—C5—H5123.4O1ii—Cl1—O1167.6 (4)
C6—N1—N2110.3 (2)O4ii—O2—Cl168.8 (9)
C6—N1—C4128.9 (2)O2ii—O4—Cl175.0 (11)
N2—N1—C4120.8 (2)O2ii—O4—O4ii119.7 (14)
C5—N2—N1103.0 (2)Cl1—O4—O4ii49.2 (5)
C6—N3—C5104.8 (2)
C3i—C1—C2—C3−0.5 (4)O3—Cl1—O2—O4ii−163.6 (14)
C3i—C1—C2—C4−178.9 (2)O4—Cl1—O2—O4ii27 (2)
C1—C2—C3—C1i0.5 (4)O2ii—Cl1—O2—O4ii16.4 (14)
C4—C2—C3—C1i178.8 (2)O1ii—Cl1—O2—O4ii113.4 (15)
C3—C2—C4—N158.5 (3)O1—Cl1—O2—O4ii−78.6 (15)
C1—C2—C4—N1−123.1 (3)O3—Cl1—O4—O2ii25 (2)
N3—C6—N1—N2−0.7 (3)O4ii—Cl1—O4—O2ii−155 (2)
N3—C6—N1—C4−179.2 (2)O2—Cl1—O4—O2ii−171.0 (9)
C2—C4—N1—C6−115.6 (3)O1ii—Cl1—O4—O2ii102.5 (15)
C2—C4—N1—N266.0 (3)O1—Cl1—O4—O2ii−69.4 (15)
N3—C5—N2—N1−0.5 (3)O3—Cl1—O4—O4ii180.000 (3)
C6—N1—N2—C50.7 (3)O2—Cl1—O4—O4ii−15.6 (12)
C4—N1—N2—C5179.3 (2)O2ii—Cl1—O4—O4ii155 (2)
N1—C6—N3—C50.3 (3)O1ii—Cl1—O4—O4ii−102.1 (6)
N2—C5—N3—C60.1 (3)O1—Cl1—O4—O4ii86.0 (6)
D—H···AD—HH···AD···AD—H···A
N3—H3A···N3iii0.861.862.690 (5)162
C1—H1···O4iv0.932.543.445 (12)164
C3—H3···O2v0.932.553.403 (15)152
C4—H4A···O4vi0.972.463.430 (15)176
C6—H6···N2vi0.932.553.256 (4)133
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3A⋯N3i0.861.862.690 (5)162
C1—H1⋯O4ii0.932.543.445 (12)164
C3—H3⋯O2iii0.932.553.403 (15)152
C4—H4A⋯O4iv0.972.463.430 (15)176
C6—H6⋯N2iv0.932.553.256 (4)133

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  4 in total

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Authors:  Baolong Li; Yanfen Peng; Baozong Li; Yong Zhang
Journal:  Chem Commun (Camb)       Date:  2005-03-18       Impact factor: 6.222

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis, X-ray diffraction structures, spectroscopic properties, and in vitro antitumor activity of isomeric (1H-1,2,4-triazole)Ru(III) complexes.

Authors:  Vladimir B Arion; Erwin Reisner; Madeleine Fremuth; Michael A Jakupec; Bernhard K Keppler; Vadim Yu Kukushkin; Armando J L Pombeiro
Journal:  Inorg Chem       Date:  2003-09-22       Impact factor: 5.165

4.  Hydrothermal syntheses, crystal structures, and characteristics of a series of Cd-btx coordination polymers (btx = 1,4-Bis(triazol-1-ylmethyl)benzene).

Authors:  Xiangru Meng; Yinglin Song; Hongwei Hou; Huayun Han; Bo Xiao; Yaoting Fan; Yu Zhu
Journal:  Inorg Chem       Date:  2004-05-31       Impact factor: 5.165

  4 in total

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