Literature DB >> 21580280

(5-Ammonio-pent-yl)triphenyl-phospho-nium dibromide ethanol solvate.

Cameron Evans1.   

Abstract

The alkyl-ammonium chain of the dication in the title mitochondrially targeted (5-ammonio-pent-yl)triphenyl--phos-pho-nium dibromide ethanol solvate, C(23)H(28)NP(2+)·2Br(-)·C(2)H(6)O, is almost planar (r.m.s deviation = 0.0716 Å for all non-H atoms) and in the extended form, maximizing the P⋯N distance [7.716 (2) Å]. The ions and solvent are linked within the crystal by N-H⋯Br, N-H⋯O and O-H⋯Br hydrogen-bonding inter-actions, forming C(3) (2)(6) chains along the b axis, with secondary C-H⋯Br and C-H⋯O inter-actions cross-linking the chains.

Entities:  

Year:  2010        PMID: 21580280      PMCID: PMC2983624          DOI: 10.1107/S1600536810003193

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the development and applications of mitochondrially targeted bio-active compounds, see: Murphy & Smith (2007 ▶); Porteous et al. (2010 ▶); Prime et al. (2009 ▶). For the synthesis and applications of amino­alkyl triphenyl­phospho­nium salts, see: Issleib & Rieschel (1965 ▶); Keough & Grayson (1964 ▶); McAllister et al. (1980 ▶). For related structures, see: Czerwinski (1986 ▶); Dubourg et al. (1986 ▶). For a review of hydrogen-bonding networks, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C23H28NP2+·2Br−·C2H6O M = 555.32 Orthorhombic, a = 16.600 (3) Å b = 11.947 (2) Å c = 26.257 (5) Å V = 5207.3 (18) Å3 Z = 8 Mo Kα radiation μ = 3.19 mm−1 T = 89 K 0.27 × 0.25 × 0.25 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2006 ▶) T min = 0.379, T max = 0.450 98142 measured reflections 5323 independent reflections 4470 reflections with I > 2σ(I) R int = 0.063

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.056 S = 1.04 5323 reflections 274 parameters H-atom parameters constrained Δρmax = 0.37 e Å−3 Δρmin = −0.33 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: APEX2 and SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶).; software used to prepare material for publication: WinGX (Farrugia, 1999 ▶), enCIFer (Allen et al., 2004 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810003193/nc2175sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810003193/nc2175Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C23H28NP2+·2Br·C2H6OF(000) = 2272
Mr = 555.32Dx = 1.417 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 8129 reflections
a = 16.600 (3) Åθ = 2.6–26.2°
b = 11.947 (2) ŵ = 3.19 mm1
c = 26.257 (5) ÅT = 89 K
V = 5207.3 (18) Å3Prism, colourless
Z = 80.27 × 0.25 × 0.25 mm
Bruker APEXII CCD area-detector diffractometer5323 independent reflections
Radiation source: fine-focus sealed tube4470 reflections with I > 2σ(I)
graphiteRint = 0.063
φ and ω scansθmax = 26.4°, θmin = 1.6°
Absorption correction: multi-scan (SADABS; Bruker, 2006)h = −20→20
Tmin = 0.379, Tmax = 0.450k = −14→14
98142 measured reflectionsl = −32→32
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.024Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.056H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0205P)2 + 4.4181P] where P = (Fo2 + 2Fc2)/3
5323 reflections(Δ/σ)max = 0.001
274 parametersΔρmax = 0.37 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C1−0.03376 (11)0.67164 (17)0.33559 (7)0.0157 (4)
H1A−0.0480.61740.30960.019*
H1B−0.02420.74280.31890.019*
C20.04374 (12)0.63369 (19)0.36243 (8)0.0193 (4)
H2A0.05840.68890.38790.023*
H2B0.03350.56360.37990.023*
C30.11389 (12)0.61792 (18)0.32598 (7)0.0187 (4)
H3A0.12920.68980.31180.022*
H3B0.09760.56960.29820.022*
C40.18562 (12)0.56646 (17)0.35333 (8)0.0184 (4)
H4A0.20490.61860.37890.022*
H4B0.16830.4990.37070.022*
C50.25410 (13)0.5377 (2)0.31770 (8)0.0248 (5)
H5A0.23760.47810.29490.03*
H5B0.26780.60260.29730.03*
C11−0.10746 (12)0.81365 (16)0.41553 (7)0.0145 (4)
C12−0.04349 (12)0.88679 (18)0.40813 (8)0.0200 (5)
H12−0.00240.86860.38550.024*
C13−0.04125 (13)0.98715 (19)0.43472 (8)0.0249 (5)
H130.00121.03670.42970.03*
C14−0.10222 (13)1.01350 (19)0.46868 (8)0.0241 (5)
H14−0.10011.08050.48660.029*
C15−0.16599 (13)0.94130 (18)0.47611 (8)0.0224 (5)
H15−0.20680.95990.49890.027*
C16−0.16931 (12)0.84124 (17)0.44969 (8)0.0190 (4)
H16−0.21230.79250.45460.023*
C21−0.21088 (11)0.69250 (17)0.34621 (7)0.0155 (4)
C22−0.22483 (13)0.78484 (18)0.31458 (8)0.0210 (5)
H22−0.18460.83780.30950.025*
C23−0.29898 (13)0.7969 (2)0.29092 (8)0.0244 (5)
H23−0.30870.85860.27020.029*
C24−0.35848 (13)0.71784 (19)0.29802 (8)0.0234 (5)
H24−0.40820.72690.28220.028*
C25−0.34490 (13)0.62523 (19)0.32838 (8)0.0241 (5)
H25−0.38480.57130.33230.029*
C26−0.27107 (12)0.61296 (18)0.35303 (8)0.0216 (5)
H26−0.26210.55160.37410.026*
C31−0.11586 (11)0.56603 (16)0.42049 (8)0.0162 (4)
C32−0.11609 (13)0.45969 (18)0.39805 (8)0.0225 (5)
H32−0.11730.45280.36280.027*
C33−0.11454 (13)0.36506 (19)0.42816 (9)0.0266 (5)
H33−0.11560.29450.41320.032*
C34−0.11135 (13)0.3750 (2)0.48077 (9)0.0286 (5)
H34−0.10950.31120.5010.034*
C35−0.11098 (13)0.47944 (19)0.50297 (8)0.0270 (5)
H35−0.10940.48560.53830.032*
C36−0.11300 (12)0.57552 (18)0.47341 (8)0.0206 (5)
H36−0.11250.64570.48870.025*
N10.32613 (10)0.50107 (16)0.34763 (7)0.0234 (4)
H1C0.34410.5580.36630.035*
H1D0.36470.47870.32640.035*
H1E0.31240.44470.3680.035*
P1−0.11631 (3)0.68613 (4)0.379672 (19)0.01355 (11)
Br10.026856 (12)0.951555 (17)0.270710 (8)0.01980 (6)
Br20.273685 (13)0.321417 (17)0.436159 (8)0.02177 (6)
O10.11446 (9)0.18279 (13)0.40281 (7)0.0322 (4)
H10.15430.21380.41470.048*
C980.07010 (15)0.2606 (2)0.37272 (13)0.0492 (8)
H98A0.06940.33240.38990.059*
H98B0.01490.23490.36990.059*
C990.1044 (2)0.2760 (2)0.31995 (12)0.0539 (8)
H99A0.16010.29710.32240.081*
H99B0.0750.33350.30250.081*
H99C0.10.2070.30140.081*
U11U22U33U12U13U23
C10.0163 (10)0.0185 (11)0.0124 (9)0.0011 (8)0.0016 (8)−0.0001 (8)
C20.0157 (10)0.0247 (11)0.0174 (10)0.0028 (9)−0.0001 (8)−0.0004 (9)
C30.0181 (10)0.0232 (11)0.0147 (10)0.0009 (9)0.0008 (8)−0.0014 (9)
C40.0156 (10)0.0211 (11)0.0186 (10)0.0001 (8)0.0014 (8)−0.0027 (9)
C50.0172 (10)0.0341 (13)0.0232 (11)0.0031 (10)0.0028 (9)0.0005 (10)
C110.0168 (10)0.0140 (10)0.0128 (9)0.0009 (8)−0.0026 (8)0.0000 (8)
C120.0199 (11)0.0232 (12)0.0171 (10)−0.0005 (9)0.0033 (8)−0.0002 (9)
C130.0259 (12)0.0209 (12)0.0277 (12)−0.0086 (9)0.0014 (10)−0.0008 (9)
C140.0304 (12)0.0192 (11)0.0226 (12)0.0015 (10)−0.0053 (10)−0.0065 (9)
C150.0211 (11)0.0259 (12)0.0203 (11)0.0048 (9)0.0023 (9)−0.0041 (9)
C160.0158 (10)0.0193 (11)0.0219 (11)0.0000 (9)−0.0017 (9)0.0000 (9)
C210.0135 (9)0.0192 (11)0.0139 (10)0.0015 (8)−0.0004 (8)−0.0032 (8)
C220.0199 (11)0.0235 (11)0.0195 (11)−0.0004 (9)−0.0004 (9)0.0020 (9)
C230.0224 (11)0.0324 (13)0.0184 (11)0.0040 (10)−0.0020 (9)0.0050 (10)
C240.0164 (10)0.0393 (14)0.0145 (10)0.0052 (10)−0.0022 (8)−0.0058 (10)
C250.0168 (11)0.0310 (13)0.0244 (12)−0.0057 (9)−0.0005 (9)−0.0050 (10)
C260.0213 (11)0.0218 (11)0.0216 (11)0.0001 (9)−0.0001 (9)−0.0004 (9)
C310.0133 (9)0.0166 (10)0.0187 (10)−0.0005 (8)0.0005 (8)0.0035 (8)
C320.0240 (11)0.0210 (11)0.0227 (11)−0.0016 (9)−0.0007 (9)0.0000 (9)
C330.0250 (12)0.0166 (11)0.0383 (14)−0.0019 (9)0.0026 (10)0.0014 (10)
C340.0232 (12)0.0263 (13)0.0362 (14)0.0029 (10)0.0065 (10)0.0155 (11)
C350.0285 (12)0.0316 (14)0.0209 (11)0.0051 (10)0.0045 (10)0.0088 (10)
C360.0202 (10)0.0214 (11)0.0203 (11)0.0027 (9)0.0017 (9)0.0006 (9)
N10.0164 (9)0.0255 (10)0.0283 (10)0.0027 (8)0.0072 (8)0.0017 (8)
P10.0129 (2)0.0145 (3)0.0132 (2)0.0000 (2)−0.00030 (19)0.0003 (2)
Br10.01722 (10)0.02281 (11)0.01939 (11)−0.00049 (8)−0.00321 (8)0.00172 (9)
Br20.02484 (12)0.01773 (11)0.02274 (11)0.00034 (9)−0.00399 (9)−0.00094 (9)
O10.0239 (9)0.0302 (9)0.0424 (10)−0.0056 (7)−0.0007 (7)−0.0017 (8)
C980.0217 (13)0.0303 (15)0.095 (3)0.0039 (11)−0.0116 (15)−0.0074 (15)
C990.067 (2)0.0290 (15)0.066 (2)0.0049 (14)−0.0318 (17)0.0120 (14)
C1—C21.535 (3)C22—H220.93
C1—P11.8020 (19)C23—C241.380 (3)
C1—H1A0.97C23—H230.93
C1—H1B0.97C24—C251.382 (3)
C2—C31.519 (3)C24—H240.93
C2—H2A0.97C25—C261.394 (3)
C2—H2B0.97C25—H250.93
C3—C41.520 (3)C26—H260.93
C3—H3A0.97C31—C361.395 (3)
C3—H3B0.97C31—C321.400 (3)
C4—C51.512 (3)C31—P11.791 (2)
C4—H4A0.97C32—C331.380 (3)
C4—H4B0.97C32—H320.93
C5—N11.496 (3)C33—C341.387 (3)
C5—H5A0.97C33—H330.93
C5—H5B0.97C34—C351.377 (3)
C11—C121.389 (3)C34—H340.93
C11—C161.403 (3)C35—C361.386 (3)
C11—P11.797 (2)C35—H350.93
C12—C131.388 (3)C36—H360.93
C12—H120.93N1—H1C0.89
C13—C141.385 (3)N1—H1D0.89
C13—H130.93N1—H1E0.89
C14—C151.379 (3)O1—C981.425 (3)
C14—H140.93O1—H10.82
C15—C161.383 (3)C98—C991.509 (4)
C15—H150.93C98—H98A0.97
C16—H160.93C98—H98B0.97
C21—C261.391 (3)C99—H99A0.96
C21—C221.400 (3)C99—H99B0.96
C21—P11.801 (2)C99—H99C0.96
C22—C231.386 (3)
C2—C1—P1111.77 (13)C24—C23—H23119.9
C2—C1—H1A109.3C22—C23—H23119.9
P1—C1—H1A109.3C23—C24—C25120.6 (2)
C2—C1—H1B109.3C23—C24—H24119.7
P1—C1—H1B109.3C25—C24—H24119.7
H1A—C1—H1B107.9C24—C25—C26119.7 (2)
C3—C2—C1112.95 (16)C24—C25—H25120.1
C3—C2—H2A109C26—C25—H25120.1
C1—C2—H2A109C21—C26—C25120.0 (2)
C3—C2—H2B109C21—C26—H26120
C1—C2—H2B109C25—C26—H26120
H2A—C2—H2B107.8C36—C31—C32119.53 (19)
C2—C3—C4110.66 (16)C36—C31—P1122.08 (16)
C2—C3—H3A109.5C32—C31—P1118.36 (15)
C4—C3—H3A109.5C33—C32—C31120.1 (2)
C2—C3—H3B109.5C33—C32—H32119.9
C4—C3—H3B109.5C31—C32—H32119.9
H3A—C3—H3B108.1C32—C33—C34120.1 (2)
C5—C4—C3112.86 (17)C32—C33—H33120
C5—C4—H4A109C34—C33—H33120
C3—C4—H4A109C35—C34—C33120.0 (2)
C5—C4—H4B109C35—C34—H34120
C3—C4—H4B109C33—C34—H34120
H4A—C4—H4B107.8C34—C35—C36120.9 (2)
N1—C5—C4110.02 (17)C34—C35—H35119.6
N1—C5—H5A109.7C36—C35—H35119.6
C4—C5—H5A109.7C35—C36—C31119.4 (2)
N1—C5—H5B109.7C35—C36—H36120.3
C4—C5—H5B109.7C31—C36—H36120.3
H5A—C5—H5B108.2C5—N1—H1C109.5
C12—C11—C16120.08 (18)C5—N1—H1D109.5
C12—C11—P1121.51 (15)H1C—N1—H1D109.5
C16—C11—P1118.33 (15)C5—N1—H1E109.5
C13—C12—C11119.58 (19)H1C—N1—H1E109.5
C13—C12—H12120.2H1D—N1—H1E109.5
C11—C12—H12120.2C31—P1—C11111.43 (9)
C14—C13—C12120.0 (2)C31—P1—C21109.24 (9)
C14—C13—H13120C11—P1—C21106.92 (9)
C12—C13—H13120C31—P1—C1107.71 (9)
C15—C14—C13120.6 (2)C11—P1—C1110.84 (9)
C15—C14—H14119.7C21—P1—C1110.71 (9)
C13—C14—H14119.7C98—O1—H1109.5
C14—C15—C16120.0 (2)O1—C98—C99113.2 (2)
C14—C15—H15120O1—C98—H98A108.9
C16—C15—H15120C99—C98—H98A108.9
C15—C16—C11119.65 (19)O1—C98—H98B108.9
C15—C16—H16120.2C99—C98—H98B108.9
C11—C16—H16120.2H98A—C98—H98B107.8
C26—C21—C22119.74 (19)C98—C99—H99A109.5
C26—C21—P1122.32 (16)C98—C99—H99B109.5
C22—C21—P1117.84 (15)H99A—C99—H99B109.5
C23—C22—C21119.7 (2)C98—C99—H99C109.5
C23—C22—H22120.2H99A—C99—H99C109.5
C21—C22—H22120.2H99B—C99—H99C109.5
C24—C23—C22120.2 (2)
P1—C1—C2—C3178.55 (15)C34—C35—C36—C310.3 (3)
C1—C2—C3—C4−172.83 (17)C32—C31—C36—C35−0.4 (3)
C2—C3—C4—C5173.97 (18)P1—C31—C36—C35−178.57 (16)
C3—C4—C5—N1172.94 (17)C36—C31—P1—C113.0 (2)
C16—C11—C12—C130.0 (3)C32—C31—P1—C11−175.18 (16)
P1—C11—C12—C13176.62 (16)C36—C31—P1—C21−114.94 (17)
C11—C12—C13—C140.5 (3)C32—C31—P1—C2166.91 (18)
C12—C13—C14—C15−0.6 (3)C36—C31—P1—C1124.75 (17)
C13—C14—C15—C160.3 (3)C32—C31—P1—C1−53.40 (18)
C14—C15—C16—C110.2 (3)C12—C11—P1—C31119.73 (17)
C12—C11—C16—C15−0.3 (3)C16—C11—P1—C31−63.56 (18)
P1—C11—C16—C15−177.07 (15)C12—C11—P1—C21−120.97 (17)
C26—C21—C22—C230.9 (3)C16—C11—P1—C2155.74 (18)
P1—C21—C22—C23−175.53 (16)C12—C11—P1—C1−0.22 (19)
C21—C22—C23—C24−0.7 (3)C16—C11—P1—C1176.49 (15)
C22—C23—C24—C25−0.5 (3)C26—C21—P1—C31−0.2 (2)
C23—C24—C25—C261.5 (3)C22—C21—P1—C31176.17 (15)
C22—C21—C26—C250.1 (3)C26—C21—P1—C11−120.89 (17)
P1—C21—C26—C25176.38 (16)C22—C21—P1—C1155.46 (18)
C24—C25—C26—C21−1.3 (3)C26—C21—P1—C1118.28 (17)
C36—C31—C32—C330.8 (3)C22—C21—P1—C1−65.38 (18)
P1—C31—C32—C33179.03 (16)C2—C1—P1—C31−44.82 (17)
C31—C32—C33—C34−1.1 (3)C2—C1—P1—C1177.32 (16)
C32—C33—C34—C351.0 (3)C2—C1—P1—C21−164.20 (14)
C33—C34—C35—C36−0.6 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1C···O1i0.891.92.790 (3)177
N1—H1D···Br1ii0.892.343.2226 (18)170
O1—H1···Br20.822.433.2397 (16)170
N1—H1E···Br20.892.43.2814 (18)168
C13—H13···O1iii0.932.663.584 (3)172
C34—H34···Br2iv0.9333.729 (2)137
C1—H1A···Br1v0.972.923.836 (2)159
C99—H99B···Br1v0.962.923.849 (3)163
C1—H1B···Br10.972.923.886 (2)173
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1C⋯O1i0.891.92.790 (3)177
N1—H1D⋯Br1ii0.892.343.2226 (18)170
O1—H1⋯Br20.822.433.2397 (16)170
N1—H1E⋯Br20.892.43.2814 (18)168
C13—H13⋯O1iii0.932.663.584 (3)172
C34—H34⋯Br2iv0.9333.729 (2)137
C1—H1A⋯Br1v0.972.923.836 (2)159
C99—H99B⋯Br1v0.962.923.849 (3)163
C1—H1B⋯Br10.972.923.886 (2)173

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Effects of phosphonium compounds on Schistosoma mansoni.

Authors:  P R McAllister; M J Dotson; S O Grim; G R Hillman
Journal:  J Med Chem       Date:  1980-08       Impact factor: 7.446

3.  A mitochondria-targeted S-nitrosothiol modulates respiration, nitrosates thiols, and protects against ischemia-reperfusion injury.

Authors:  Tracy A Prime; Frances H Blaikie; Cameron Evans; Sergiy M Nadtochiy; Andrew M James; Christina C Dahm; Dario A Vitturi; Rakesh P Patel; C Robin Hiley; Irina Abakumova; Raquel Requejo; Edward T Chouchani; Thomas R Hurd; John F Garvey; Cormac T Taylor; Paul S Brookes; Robin A J Smith; Michael P Murphy
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-15       Impact factor: 11.205

Review 4.  Targeting antioxidants to mitochondria by conjugation to lipophilic cations.

Authors:  Michael P Murphy; Robin A J Smith
Journal:  Annu Rev Pharmacol Toxicol       Date:  2007       Impact factor: 13.820

  4 in total

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