Literature DB >> 21580238

Poly[trans-diaqua-bis[μ-3-(3-pyrid-yl)propionato-κN,O]cadmium(II)].

Young Ok Jang1, Soon W Lee.   

Abstract

The title compound [Cd(L)(2)(H(2)O)(2)](n) (L = 3-pyridine-propionic acid, C(8)H(8)NO(2)), is a two-dimensional coordination polymer in which the Cd(II) ion lies on an inversion center and is coordinated in a slightly distorted octa-hedral environment. The aqua H atoms are involved in inter-molecular O-H⋯O hydrogen bonds, which extend the two-dimensional structure to a three-dimensional architecture. The CdCd separation within a layer is 9.0031 (1) Å.

Entities:  

Year:  2010        PMID: 21580238      PMCID: PMC2983754          DOI: 10.1107/S1600536810005222

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the isostructural zinc analog, see: Wang et al. (2006 ▶) and for the cobalt and nickel analogs, see: Martin et al. (2007 ▶). For background information on coordination polymers, see: Batten et al. (2009 ▶); Lu (2003 ▶); Perry et al. (2009 ▶); Robin & Fromm (2006 ▶). For coordination polymers based on pyridine carboxyl­ates, see: Huh & Lee (2006 ▶, 2007 ▶, 2008 ▶); Kim et al. (2007 ▶); Min et al. (2001 ▶, 2002 ▶); Min & Lee (2002 ▶).

Experimental

Crystal data

[Cd(C8H8NO2)2(H2O)2] M = 448.74 Monoclinic, a = 9.6934 (4) Å b = 8.9082 (4) Å c = 10.1199 (5) Å β = 104.309 (2)° V = 846.75 (7) Å3 Z = 2 Mo Kα radiation μ = 1.33 mm−1 T = 296 K 0.42 × 0.38 × 0.28 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.606, T max = 0.708 12941 measured reflections 2113 independent reflections 1911 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.016 wR(F 2) = 0.042 S = 1.05 2113 reflections 155 parameters All H-atom parameters refined Δρmax = 0.30 e Å−3 Δρmin = −0.22 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810005222/lh2993sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810005222/lh2993Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cd(C8H8NO2)2(H2O)2]F(000) = 452
Mr = 448.74Dx = 1.760 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 8598 reflections
a = 9.6934 (4) Åθ = 2.6–28.4°
b = 8.9082 (4) ŵ = 1.33 mm1
c = 10.1199 (5) ÅT = 296 K
β = 104.309 (2)°Block, colourless
V = 846.75 (7) Å30.42 × 0.38 × 0.28 mm
Z = 2
Bruker SMART CCD diffractometer2113 independent reflections
Radiation source: sealed tube1911 reflections with I > 2σ(I)
graphiteRint = 0.021
φ and ω scansθmax = 28.4°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −12→12
Tmin = 0.606, Tmax = 0.708k = −11→11
12941 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.016Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.042All H-atom parameters refined
S = 1.05w = 1/[σ2(Fo2) + (0.0233P)2 + 0.1949P] where P = (Fo2 + 2Fc2)/3
2113 reflections(Δ/σ)max = 0.001
155 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cd10.50000.00000.00000.02437 (5)
N10.28876 (11)0.07564 (12)0.05233 (11)0.0301 (2)
O10.61972 (13)0.02896 (15)0.22844 (12)0.0382 (2)
O20.21558 (10)0.21211 (11)0.63186 (10)0.0359 (2)
O30.04577 (10)0.26152 (10)0.44405 (10)0.0352 (2)
C10.20346 (15)0.17483 (15)−0.02640 (14)0.0329 (3)
C20.07951 (16)0.22538 (17)0.00161 (16)0.0379 (3)
C30.04061 (15)0.16952 (16)0.11451 (15)0.0357 (3)
C40.12544 (13)0.06336 (15)0.19621 (13)0.0284 (3)
C50.24972 (16)0.02120 (15)0.16092 (16)0.0303 (3)
C60.08326 (19)−0.01072 (15)0.31409 (17)0.0345 (3)
C70.17242 (17)0.03087 (17)0.45527 (15)0.0325 (3)
C80.14245 (13)0.18100 (13)0.51422 (13)0.0260 (2)
H10.2335 (18)0.208 (2)−0.1008 (18)0.042 (4)*
H20.0224 (18)0.296 (2)−0.0590 (18)0.043 (4)*
H3−0.0467 (19)0.199 (2)0.1376 (18)0.050 (5)*
H50.314 (2)−0.048 (2)0.2165 (19)0.044 (5)*
H6A−0.022 (2)0.0146 (17)0.302 (2)0.045 (6)*
H6B0.0908 (17)−0.1217 (19)0.3076 (17)0.039 (4)*
H7A0.274 (3)0.037 (3)0.460 (2)0.059 (6)*
H7B0.158 (2)−0.041 (2)0.525 (2)0.045 (5)*
HO1A0.673 (2)0.105 (3)0.217 (2)0.066 (7)*
HO1B0.672 (3)−0.041 (3)0.266 (3)0.065 (7)*
U11U22U33U12U13U23
Cd10.02423 (8)0.02733 (8)0.02284 (8)−0.00074 (4)0.00826 (5)−0.00185 (4)
N10.0303 (5)0.0323 (6)0.0310 (6)0.0030 (4)0.0137 (4)0.0022 (4)
O10.0427 (6)0.0401 (6)0.0278 (5)−0.0014 (5)0.0011 (5)−0.0019 (4)
O20.0375 (5)0.0343 (5)0.0338 (5)0.0007 (4)0.0047 (4)−0.0022 (4)
O30.0369 (5)0.0296 (5)0.0372 (5)0.0071 (4)0.0055 (4)−0.0010 (4)
C10.0388 (7)0.0314 (6)0.0303 (7)0.0007 (5)0.0120 (6)0.0035 (5)
C20.0378 (7)0.0357 (7)0.0387 (8)0.0090 (6)0.0064 (6)0.0053 (6)
C30.0293 (6)0.0380 (7)0.0413 (8)0.0047 (5)0.0119 (6)−0.0040 (6)
C40.0309 (6)0.0288 (6)0.0281 (6)−0.0039 (5)0.0120 (5)−0.0049 (5)
C50.0317 (7)0.0316 (7)0.0295 (7)0.0043 (5)0.0114 (6)0.0036 (5)
C60.0407 (8)0.0357 (8)0.0318 (8)−0.0082 (5)0.0178 (6)−0.0043 (5)
C70.0385 (8)0.0323 (6)0.0286 (7)0.0063 (6)0.0120 (6)0.0010 (5)
C80.0265 (6)0.0252 (6)0.0294 (6)−0.0013 (4)0.0126 (5)0.0024 (5)
Cd1—O3i2.2704 (9)C1—H10.919 (18)
Cd1—O3ii2.2705 (9)C2—C31.381 (2)
Cd1—O12.3306 (11)C2—H20.954 (17)
Cd1—O1iii2.3306 (11)C3—C41.385 (2)
Cd1—N1iii2.3374 (10)C3—H30.969 (18)
Cd1—N12.3374 (10)C4—C51.3902 (18)
N1—C11.3318 (17)C4—C61.5055 (19)
N1—C51.3385 (18)C5—H50.96 (2)
O1—HO1A0.88 (2)C6—C71.522 (2)
O1—HO1B0.83 (3)C6—H6A1.03 (2)
O2—C81.2568 (15)C6—H6B0.995 (17)
O3—C81.2522 (15)C7—C81.5213 (19)
O3—Cd1iv2.2705 (9)C7—H7A0.98 (2)
C1—C21.3766 (19)C7—H7B0.99 (2)
O3i—Cd1—O3ii180.0C1—C2—H2118.7 (11)
O3i—Cd1—O186.35 (4)C3—C2—H2122.4 (11)
O3ii—Cd1—O193.65 (4)C2—C3—C4119.78 (12)
O3i—Cd1—O1iii93.65 (4)C2—C3—H3122.3 (11)
O3ii—Cd1—O1iii86.35 (4)C4—C3—H3117.9 (11)
O1—Cd1—O1iii180.00 (3)C3—C4—C5117.09 (12)
O3i—Cd1—N1iii91.31 (4)C3—C4—C6122.34 (12)
O3ii—Cd1—N1iii88.69 (4)C5—C4—C6120.49 (13)
O1—Cd1—N1iii90.42 (4)N1—C5—C4123.49 (13)
O1iii—Cd1—N1iii89.58 (4)N1—C5—H5116.2 (11)
O3i—Cd1—N188.69 (4)C4—C5—H5120.3 (11)
O3ii—Cd1—N191.31 (4)C4—C6—C7115.77 (12)
O1—Cd1—N189.58 (4)C4—C6—H6A105.5 (12)
O1iii—Cd1—N190.42 (4)C7—C6—H6A112.2 (13)
N1iii—Cd1—N1180.00 (5)C4—C6—H6B110.2 (10)
C1—N1—C5118.16 (11)C7—C6—H6B105.7 (9)
C1—N1—Cd1120.32 (9)H6A—C6—H6B107.3 (13)
C5—N1—Cd1121.52 (9)C8—C7—C6117.58 (12)
Cd1—O1—HO1A97.1 (14)C8—C7—H7A102.6 (13)
Cd1—O1—HO1B118.0 (18)C6—C7—H7A113.1 (14)
HO1A—O1—HO1B109 (2)C8—C7—H7B102.8 (12)
C8—O3—Cd1iv124.02 (8)C6—C7—H7B111.3 (12)
N1—C1—C2122.56 (13)H7A—C7—H7B108.6 (17)
N1—C1—H1115.2 (11)O3—C8—O2125.36 (12)
C2—C1—H1122.3 (11)O3—C8—C7118.03 (12)
C1—C2—C3118.88 (13)O2—C8—C7116.59 (11)
D—H···AD—HH···AD···AD—H···A
O1—HO1B···O2v0.83 (3)2.01 (3)2.8361 (16)174 (2)
O1—HO1A···O2ii0.88 (2)1.94 (2)2.7546 (17)155 (2)
Cd1—O3i2.2704 (9)
Cd1—O12.3306 (11)
Cd1—N12.3374 (10)
O3i—Cd1—O186.35 (4)
O3i—Cd1—N1ii91.31 (4)
O1—Cd1—N189.58 (4)

Symmetry codes: (i) ; (ii) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—HO1B⋯O2iii0.83 (3)2.01 (3)2.8361 (16)174 (2)
O1—HO1A⋯O2iv0.88 (2)1.94 (2)2.7546 (17)155 (2)

Symmetry codes: (iii) ; (iv) .

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