Literature DB >> 21580228

Poly[tris-(2,5-dimethyl-benzene-1,4--dicarboxyl-ato)bis-(pyridine)trizinc(II)].

Fang-Kuo Wang, Shi-Yao Yang, Rong-Bin Huang, Li Nie.   

Abstract

The asymmetric unit of the title polymeric compound, [Zn(3)(C(10)H(8)O(4))(3)(C(5)H(5)N)(2)](n) or [Zn(3)(dmbdc)(3)(py)(2)](n) (dmbdc = 2,5-dimethyl-benzene-dicarboxyl-ate; py = pyridine) contains two Zn(II) ions, one of which is located on an inversion centre, one and a half 2,5-dimethyl-benzene-dicarboxyl-ate ligands and one pyridine ligand. Each ZnO(6) octa-hedron is sandwiched between two ZnO(4)N square-pyramids, forming a trinuclear zinc secondary building unit (SBU); each SBU is further linked by six 2,5-dimethyl-benzene-dicarboxyl-ate ligands with six adjacent trinuclear zinc SBU's, forming a two-dimensional layer structure with a (3,6) net. One of the three zinc ions is octa-hedrally coordinated and the other two are square-pyramidally coordinated. The coordination modes for 2,5-dimethyl-benzene-dicarboxyl-ates are bis-(bidentate) or bidentate-tridentate.

Entities:  

Year:  2010        PMID: 21580228      PMCID: PMC2983653          DOI: 10.1107/S1600536810004848

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the potential applications of metal-organic frameworks formed from terephthalic acid and its derivatives, see Wang et al. (2007 ▶); Grzesiak et al. (2006 ▶); Rosi et al. (2005 ▶); Burrows et al. (2005 ▶); Liao et al. (2006 ▶); Yang et al. (2002 ▶); Eddaoudi et al. (2002 ▶). For related structures, see: Wang et al. (2008 ▶); Zhou et al. (2009 ▶).

Experimental

Crystal data

[Zn3(C10H8O4)3(C5H5N)2] M = 930.80 Monoclinic, a = 22.3372 (15) Å b = 10.2643 (7) Å c = 16.9261 (11) Å β = 105.140 (1)° V = 3746.0 (4) Å3 Z = 4 Mo Kα radiation μ = 1.97 mm−1 T = 299 K 0.12 × 0.08 × 0.07 mm

Data collection

Bruker SMART APEX area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2002 ▶) T min = 0.798, T max = 0.874 16107 measured reflections 4487 independent reflections 3559 reflections with I > 2σ(I) R int = 0.059

Refinement

R[F 2 > 2σ(F 2)] = 0.066 wR(F 2) = 0.156 S = 1.08 4487 reflections 262 parameters H-atom parameters constrained Δρmax = 0.74 e Å−3 Δρmin = −0.63 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPII (Johnson, 1976 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I. DOI: 10.1107/S1600536810004848/bv2132sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810004848/bv2132Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn3(C10H8O4)3(C5H5N)2]F(000) = 1896
Mr = 930.80Dx = 1.650 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 2781 reflections
a = 22.3372 (15) Åθ = 2.2–25.0°
b = 10.2643 (7) ŵ = 1.97 mm1
c = 16.9261 (11) ÅT = 299 K
β = 105.140 (1)°Block, colorless
V = 3746.0 (4) Å30.12 × 0.08 × 0.07 mm
Z = 4
Bruker SMART APEX area-detector diffractometer4487 independent reflections
Radiation source: fine-focus sealed tube3559 reflections with I > 2σ(I)
graphiteRint = 0.059
φ and ω scanθmax = 28.7°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2002)h = −28→30
Tmin = 0.798, Tmax = 0.874k = −13→13
16107 measured reflectionsl = −21→22
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.066Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.156H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0282P)2 + 12.5564P] where P = (Fo2 + 2Fc2)/3
4487 reflections(Δ/σ)max < 0.001
262 parametersΔρmax = 0.74 e Å3
0 restraintsΔρmin = −0.62 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.40381 (2)0.67147 (5)0.55736 (3)0.02859 (17)
Zn20.25000.75000.50000.02465 (19)
O10.40247 (16)0.7797 (3)0.4622 (2)0.0379 (8)
O20.31369 (15)0.8673 (3)0.4686 (2)0.0347 (7)
O30.29594 (17)1.2435 (4)0.12228 (19)0.0425 (9)
O40.39737 (16)1.2197 (4)0.1478 (2)0.0426 (9)
O50.37531 (18)0.4905 (4)0.5713 (3)0.0557 (11)
O60.30025 (18)0.5819 (3)0.4821 (2)0.0444 (9)
N10.49686 (18)0.6283 (4)0.5907 (3)0.0397 (10)
C10.3588 (2)0.9476 (5)0.3687 (3)0.0309 (10)
C20.4095 (2)0.9664 (5)0.3361 (3)0.0368 (11)
C30.4018 (2)1.0506 (5)0.2701 (3)0.0362 (11)
H3A0.43541.06450.24830.043*
C40.3476 (2)1.1143 (4)0.2354 (3)0.0297 (9)
C50.2970 (2)1.0983 (5)0.2683 (3)0.0310 (9)
C60.3049 (2)1.0147 (5)0.3343 (3)0.0325 (10)
H6A0.27161.00310.35700.039*
C70.3581 (2)0.8590 (4)0.4383 (3)0.0297 (9)
C80.4722 (3)0.9037 (8)0.3691 (5)0.074 (2)
H8A0.50090.93820.34090.111*
H8B0.46860.81120.36080.111*
H8C0.48710.92180.42650.111*
C90.3457 (2)1.1994 (4)0.1631 (3)0.0308 (10)
C100.2367 (3)1.1692 (6)0.2392 (4)0.0521 (15)
H10A0.20901.14240.27090.078*
H10B0.21871.14930.18250.078*
H10C0.24391.26130.24540.078*
C110.3226 (2)0.4861 (5)0.5232 (3)0.0400 (12)
C120.2872 (2)0.3605 (4)0.5142 (3)0.0322 (10)
C130.2293 (2)0.3618 (4)0.4598 (3)0.0363 (11)
H13A0.21540.43920.43270.044*
C140.3094 (2)0.2458 (5)0.5566 (3)0.0381 (11)
C150.3713 (3)0.2313 (6)0.6163 (4)0.0630 (18)
H15A0.37680.14270.63510.095*
H15B0.37380.28810.66210.095*
H15C0.40330.25370.59030.095*
C160.5188 (3)0.5242 (8)0.6329 (6)0.103 (4)
H16A0.49110.46430.64470.124*
C170.5805 (4)0.5003 (10)0.6601 (8)0.134 (5)
H17A0.59440.42560.69060.161*
C180.6214 (3)0.5840 (8)0.6433 (6)0.081 (2)
H18A0.66380.57000.66340.098*
C190.6002 (3)0.6877 (7)0.5972 (4)0.0612 (17)
H19A0.62740.74530.58210.073*
C200.5379 (3)0.7074 (6)0.5725 (4)0.0536 (15)
H20A0.52340.78080.54110.064*
U11U22U33U12U13U23
Zn10.0302 (3)0.0257 (3)0.0305 (3)−0.0001 (2)0.0090 (2)0.0002 (2)
Zn20.0236 (4)0.0256 (4)0.0249 (3)−0.0023 (3)0.0067 (3)−0.0003 (3)
O10.0374 (18)0.0410 (19)0.0380 (18)0.0055 (15)0.0149 (15)0.0153 (15)
O20.0362 (18)0.0304 (17)0.0437 (19)−0.0038 (14)0.0213 (15)0.0055 (14)
O30.042 (2)0.060 (2)0.0234 (15)0.0153 (17)0.0050 (15)0.0087 (16)
O40.0374 (19)0.053 (2)0.0365 (18)−0.0024 (16)0.0089 (15)0.0189 (16)
O50.042 (2)0.035 (2)0.087 (3)−0.0140 (17)0.011 (2)−0.007 (2)
O60.065 (2)0.0217 (16)0.058 (2)−0.0018 (16)0.038 (2)−0.0008 (16)
N10.028 (2)0.037 (2)0.052 (3)0.0043 (17)0.0073 (18)0.002 (2)
C10.029 (2)0.036 (2)0.030 (2)−0.0017 (18)0.0097 (18)0.0038 (19)
C20.031 (2)0.040 (3)0.044 (3)0.004 (2)0.018 (2)0.009 (2)
C30.032 (2)0.045 (3)0.036 (2)0.002 (2)0.016 (2)0.009 (2)
C40.030 (2)0.031 (2)0.026 (2)−0.0008 (18)0.0042 (18)0.0016 (18)
C50.027 (2)0.033 (2)0.031 (2)−0.0005 (18)0.0057 (18)0.0025 (19)
C60.029 (2)0.035 (2)0.037 (2)0.0010 (19)0.0134 (19)0.004 (2)
C70.031 (2)0.026 (2)0.033 (2)−0.0048 (18)0.0113 (19)0.0013 (18)
C80.041 (3)0.100 (5)0.092 (5)0.031 (4)0.037 (3)0.060 (5)
C90.036 (3)0.028 (2)0.027 (2)−0.0017 (19)0.0062 (19)−0.0019 (18)
C100.036 (3)0.070 (4)0.051 (3)0.013 (3)0.014 (2)0.020 (3)
C110.045 (3)0.027 (2)0.055 (3)−0.005 (2)0.027 (3)−0.011 (2)
C120.032 (2)0.021 (2)0.049 (3)−0.0012 (17)0.019 (2)−0.0027 (19)
C130.034 (2)0.023 (2)0.053 (3)0.0055 (18)0.012 (2)0.007 (2)
C140.033 (2)0.031 (2)0.050 (3)0.0039 (19)0.009 (2)0.002 (2)
C150.042 (3)0.049 (4)0.084 (5)0.002 (3)−0.008 (3)0.014 (3)
C160.047 (4)0.083 (6)0.166 (9)0.003 (4)0.006 (5)0.071 (6)
C170.045 (4)0.109 (7)0.231 (13)0.015 (5)0.006 (6)0.098 (9)
C180.037 (3)0.081 (5)0.121 (7)0.012 (4)0.010 (4)−0.002 (5)
C190.038 (3)0.078 (5)0.069 (4)−0.011 (3)0.015 (3)−0.014 (4)
C200.043 (3)0.059 (4)0.059 (4)−0.006 (3)0.014 (3)0.007 (3)
Zn1—O4i1.931 (3)C4—C91.496 (6)
Zn1—O11.950 (3)C5—C61.384 (6)
Zn1—O51.998 (4)C5—C101.495 (7)
Zn1—N12.055 (4)C6—H6A0.9300
Zn1—C112.588 (5)C8—H8A0.9600
Zn2—O22.037 (3)C8—H8B0.9600
Zn2—O2ii2.037 (3)C8—H8C0.9600
Zn2—O3iii2.057 (3)C10—H10A0.9600
Zn2—O3i2.057 (3)C10—H10B0.9600
Zn2—O62.123 (3)C10—H10C0.9600
Zn2—O6ii2.123 (3)C11—C121.500 (6)
O1—C71.265 (6)C12—C131.378 (7)
O2—C71.233 (5)C12—C141.401 (7)
O3—C91.231 (6)C13—C14vi1.385 (7)
O3—Zn2iv2.057 (3)C13—H13A0.9300
O4—C91.264 (6)C14—C13vi1.385 (7)
O4—Zn1v1.931 (3)C14—C151.492 (7)
O5—C111.245 (6)C15—H15A0.9600
O6—C111.233 (6)C15—H15B0.9600
N1—C161.308 (8)C15—H15C0.9600
N1—C201.320 (7)C16—C171.356 (10)
C1—C61.378 (6)C16—H16A0.9300
C1—C21.395 (6)C17—C181.337 (11)
C1—C71.492 (6)C17—H17A0.9300
C2—C31.387 (7)C18—C191.332 (10)
C2—C81.511 (7)C18—H18A0.9300
C3—C41.367 (6)C19—C201.359 (8)
C3—H3A0.9300C19—H19A0.9300
C4—C51.393 (6)C20—H20A0.9300
O4i—Zn1—O1109.70 (17)O2—C7—C1117.6 (4)
O4i—Zn1—O5110.64 (18)O1—C7—C1118.4 (4)
O1—Zn1—O5133.67 (17)C2—C8—H8A109.5
O4i—Zn1—N1100.73 (17)C2—C8—H8B109.5
O1—Zn1—N198.40 (16)H8A—C8—H8B109.5
O5—Zn1—N195.60 (17)C2—C8—H8C109.5
O4i—Zn1—C11114.20 (16)H8A—C8—H8C109.5
O1—Zn1—C11112.05 (17)H8B—C8—H8C109.5
O5—Zn1—C1127.91 (16)O3—C9—O4124.3 (4)
N1—Zn1—C11120.16 (17)O3—C9—C4120.2 (4)
O2—Zn2—O2ii180.00 (18)O4—C9—C4115.5 (4)
O2—Zn2—O3iii87.46 (14)C5—C10—H10A109.5
O2ii—Zn2—O3iii92.54 (14)C5—C10—H10B109.5
O2—Zn2—O3i92.54 (14)H10A—C10—H10B109.5
O2ii—Zn2—O3i87.46 (14)C5—C10—H10C109.5
O3iii—Zn2—O3i180.000 (1)H10A—C10—H10C109.5
O2—Zn2—O690.67 (13)H10B—C10—H10C109.5
O2ii—Zn2—O689.33 (13)O6—C11—O5121.0 (5)
O3iii—Zn2—O688.47 (15)O6—C11—C12120.2 (5)
O3i—Zn2—O691.53 (15)O5—C11—C12118.8 (5)
O2—Zn2—O6ii89.33 (13)O6—C11—Zn172.3 (3)
O2ii—Zn2—O6ii90.67 (13)O5—C11—Zn148.7 (2)
O3iii—Zn2—O6ii91.53 (15)C12—C11—Zn1167.2 (4)
O3i—Zn2—O6ii88.47 (15)C13—C12—C14119.8 (4)
O6—Zn2—O6ii180.0 (2)C13—C12—C11116.0 (4)
C7—O1—Zn1118.2 (3)C14—C12—C11124.3 (5)
C7—O2—Zn2139.4 (3)C12—C13—C14vi123.7 (4)
C9—O3—Zn2iv135.7 (3)C12—C13—H13A118.2
C9—O4—Zn1v121.2 (3)C14vi—C13—H13A118.2
C11—O5—Zn1103.4 (3)C13vi—C14—C12116.6 (5)
C11—O6—Zn2136.0 (3)C13vi—C14—C15118.4 (5)
C16—N1—C20116.5 (5)C12—C14—C15125.0 (5)
C16—N1—Zn1122.3 (4)C14—C15—H15A109.5
C20—N1—Zn1121.2 (4)C14—C15—H15B109.5
C6—C1—C2118.3 (4)H15A—C15—H15B109.5
C6—C1—C7116.7 (4)C14—C15—H15C109.5
C2—C1—C7125.1 (4)H15A—C15—H15C109.5
C3—C2—C1117.6 (4)H15B—C15—H15C109.5
C3—C2—C8118.1 (4)N1—C16—C17122.5 (7)
C1—C2—C8124.4 (4)N1—C16—H16A118.8
C4—C3—C2123.6 (4)C17—C16—H16A118.8
C4—C3—H3A118.2C18—C17—C16120.0 (8)
C2—C3—H3A118.2C18—C17—H17A120.0
C3—C4—C5119.5 (4)C16—C17—H17A120.0
C3—C4—C9117.6 (4)C19—C18—C17118.8 (7)
C5—C4—C9122.9 (4)C19—C18—H18A120.6
C6—C5—C4116.7 (4)C17—C18—H18A120.6
C6—C5—C10118.8 (4)C18—C19—C20118.5 (7)
C4—C5—C10124.5 (4)C18—C19—H19A120.7
C1—C6—C5124.3 (4)C20—C19—H19A120.7
C1—C6—H6A117.8N1—C20—C19123.7 (6)
C5—C6—H6A117.8N1—C20—H20A118.2
O2—C7—O1124.0 (4)C19—C20—H20A118.2
  4 in total

1.  Systematic design of pore size and functionality in isoreticular MOFs and their application in methane storage.

Authors:  Mohamed Eddaoudi; Jaheon Kim; Nathaniel Rosi; David Vodak; Joseph Wachter; Michael O'Keeffe; Omar M Yaghi
Journal:  Science       Date:  2002-01-18       Impact factor: 47.728

2.  Rod packings and metal-organic frameworks constructed from rod-shaped secondary building units.

Authors:  Nathaniel L Rosi; Jaheon Kim; Mohamed Eddaoudi; Banglin Chen; Michael O'Keeffe; Omar M Yaghi
Journal:  J Am Chem Soc       Date:  2005-02-09       Impact factor: 15.419

3.  Polymer-induced heteronucleation for the discovery of new extended solids.

Authors:  Adam L Grzesiak; Fernando J Uribe; Nathan W Ockwig; Omar M Yaghi; Adam J Matzger
Journal:  Angew Chem Int Ed Engl       Date:  2006-04-10       Impact factor: 15.336

4.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  4 in total

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